Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001376/0.001376, allocations: 104.3 kB / 19.7 MB, free: 2.156 MB / 14.72 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001477/0.001477, allocations: 212.3 kB / 22.99 MB, free: 4.984 MB / 14.72 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.45/1.45, allocations: 230.6 MB / 256.8 MB, free: 7.797 MB / 206.1 MB " [Timeout remaining time 178] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo): time 0.1479/0.1479, allocations: 23.88 MB / 337.1 MB, free: 10.96 MB / 270.1 MB " [Timeout remaining time 180] Using package Chemical with version 2.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation") translateModel(Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation") [Timeout 660] "Notification: Chemical requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Performance of FrontEnd - loaded program: time 0.001991/0.001991, allocations: 67.89 kB / 472.4 MB, free: 6.977 MB / 334.1 MB Notification: Performance of FrontEnd - Absyn->SCode: time 0.3392/0.3412, allocations: 59.87 MB / 0.5198 GB, free: 9.738 MB / 382.1 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Notification: The diagnostics message for the missing inner is: Your model is using an outer \"system\" component but an inner \"system\" component is not defined. For simulation drag Modelica.Fluid.System into your model to specify system properties. Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation): time 0.08733/0.4285, allocations: 39.9 MB / 0.5588 GB, free: 0.8984 MB / 398.1 MB Notification: Performance of NFInst.instExpressions: time 0.09169/0.5202, allocations: 64.09 MB / 0.6213 GB, free: 1.645 MB / 462.1 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.007128/0.5274, allocations: 79.38 kB / 0.6214 GB, free: 1.566 MB / 462.1 MB Notification: Performance of NFTyping.typeComponents: time 0.006445/0.5338, allocations: 1.473 MB / 0.6229 GB, free: 84 kB / 462.1 MB Notification: Performance of NFTyping.typeBindings: time 0.02383/0.5576, allocations: 5.994 MB / 0.6287 GB, free: 10.05 MB / 478.1 MB Notification: Performance of NFTyping.typeClassSections: time 0.03247/0.5901, allocations: 10.4 MB / 0.6389 GB, free: 15.59 MB / 494.1 MB Notification: Performance of NFFlatten.flatten: time 0.0308/0.6209, allocations: 26.68 MB / 0.6649 GB, free: 4.824 MB / 0.4981 GB Notification: Performance of NFFlatten.resolveConnections: time 0.0252/0.6461, allocations: 16.27 MB / 0.6808 GB, free: 4.441 MB / 0.5137 GB Notification: Performance of NFEvalConstants.evaluate: time 0.03155/0.6777, allocations: 17.82 MB / 0.6982 GB, free: 2.586 MB / 0.5294 GB Notification: Performance of NFSimplifyModel.simplify: time 0.03461/0.7123, allocations: 16.73 MB / 0.7145 GB, free: 1.812 MB / 0.545 GB Notification: Performance of NFPackage.collectConstants: time 0.01348/0.7257, allocations: 3.129 MB / 0.7176 GB, free: 14.68 MB / 0.5606 GB Notification: Performance of NFFlatten.collectFunctions: time 0.03769/0.7634, allocations: 10.52 MB / 0.7279 GB, free: 4.148 MB / 0.5606 GB Notification: Performance of NFScalarize.scalarize: time 0.5408/1.304, allocations: 7.07 MB / 0.7348 GB, free: 51.15 MB / 0.5607 GB Notification: Performance of NFVerifyModel.verify: time 0.02867/1.333, allocations: 10.51 MB / 0.745 GB, free: 51.15 MB / 0.5607 GB Notification: Performance of NFConvertDAE.convert: time 0.07169/1.405, allocations: 44.91 MB / 0.7889 GB, free: 47.18 MB / 0.5607 GB Notification: Performance of FrontEnd - DAE generated: time 7.444e-06/1.405, allocations: 0 / 0.7889 GB, free: 47.18 MB / 0.5607 GB Notification: Performance of FrontEnd: time 2.033e-06/1.405, allocations: 0 / 0.7889 GB, free: 47.18 MB / 0.5607 GB Notification: Performance of Transformations before backend: time 0.00126/1.406, allocations: 0 / 0.7889 GB, free: 47.18 MB / 0.5607 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 3808 * Number of variables: 3808 Notification: Performance of Generate backend data structure: time 0.09771/1.504, allocations: 23.66 MB / 0.812 GB, free: 34.55 MB / 0.5607 GB Notification: Performance of prepare preOptimizeDAE: time 4.709e-05/1.504, allocations: 11.34 kB / 0.812 GB, free: 34.55 MB / 0.5607 GB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.02986/1.533, allocations: 3.974 MB / 0.8159 GB, free: 32.77 MB / 0.5607 GB Notification: Performance of preOpt evaluateParameters (simulation): time 0.03742/1.571, allocations: 12.63 MB / 0.8282 GB, free: 26.18 MB / 0.5607 GB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.002142/1.573, allocations: 3.069 MB / 0.8312 GB, free: 23.34 MB / 0.5607 GB Notification: Performance of preOpt expandDerOperator (simulation): time 0.01248/1.585, allocations: 1.535 MB / 0.8327 GB, free: 22.79 MB / 0.5607 GB Notification: Performance of preOpt clockPartitioning (simulation): time 0.09877/1.684, allocations: 35.25 MB / 0.8671 GB, free: 12.05 MB / 0.5763 GB Notification: Performance of preOpt findStateOrder (simulation): time 0.0008242/1.685, allocations: 11.22 kB / 0.8672 GB, free: 12.04 MB / 0.5763 GB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.01203/1.697, allocations: 0.5859 MB / 0.8677 GB, free: 11.46 MB / 0.5763 GB Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0004025/1.698, allocations: 360 kB / 0.8681 GB, free: 11.11 MB / 0.5763 GB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.1206/1.818, allocations: 47.47 MB / 0.9144 GB, free: 11.64 MB / 0.6232 GB Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts. Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.5824/2.4, allocations: 116.5 MB / 1.028 GB, free: 190.2 MB / 0.67 GB Notification: Performance of preOpt comSubExp (simulation): time 0.5327/2.933, allocations: 218.4 MB / 1.241 GB, free: 17.51 MB / 0.67 GB Notification: Performance of preOpt resolveLoops (simulation): time 0.35/3.283, allocations: 18.49 MB / 1.26 GB, free: 231.6 MB / 0.67 GB Notification: Performance of preOpt evalFunc (simulation): time 0.1621/3.445, allocations: 76.47 MB / 1.334 GB, free: 203.2 MB / 0.67 GB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0001207/3.445, allocations: 135.2 kB / 1.334 GB, free: 203.1 MB / 0.67 GB Notification: Performance of preOpt simplifyInStream (simulation): time 0.02967/3.475, allocations: 6.288 MB / 1.34 GB, free: 200 MB / 0.67 GB Notification: Performance of pre-optimization done (n=995): time 5.755e-05/3.475, allocations: 0 / 1.34 GB, free: 200 MB / 0.67 GB Notification: Performance of matching and sorting (n=1129): time 0.6964/4.172, allocations: 135.7 MB / 1.473 GB, free: 65.89 MB / 0.67 GB Notification: Performance of inlineWhenForInitialization (initialization): time 9.849e-05/4.172, allocations: 176.2 kB / 1.473 GB, free: 65.7 MB / 0.67 GB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.01687/4.189, allocations: 9.742 MB / 1.483 GB, free: 55.99 MB / 0.67 GB Notification: Performance of collectPreVariables (initialization): time 0.004769/4.193, allocations: 209.7 kB / 1.483 GB, free: 55.78 MB / 0.67 GB Notification: Performance of collectInitialEqns (initialization): time 0.006057/4.199, allocations: 7.127 MB / 1.49 GB, free: 48.65 MB / 0.67 GB Notification: Performance of collectInitialBindings (initialization): time 0.008998/4.208, allocations: 4.106 MB / 1.494 GB, free: 44.6 MB / 0.67 GB Notification: Performance of simplifyInitialFunctions (initialization): time 0.01196/4.22, allocations: 3.261 MB / 1.497 GB, free: 41.32 MB / 0.67 GB Notification: Performance of setup shared object (initialization): time 4.481e-05/4.22, allocations: 309.1 kB / 1.497 GB, free: 41.02 MB / 0.67 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.01932/4.24, allocations: 11.83 MB / 1.509 GB, free: 29.18 MB / 0.67 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.3503/4.59, allocations: 16.58 MB / 1.525 GB, free: 208 MB / 0.67 GB Notification: Performance of analyzeInitialSystem (initialization): time 0.05575/4.646, allocations: 29.76 MB / 1.554 GB, free: 198.2 MB / 0.67 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0001536/4.646, allocations: 47 kB / 1.554 GB, free: 198.2 MB / 0.67 GB Notification: Performance of matching and sorting (n=1889) (initialization): time 0.4309/5.077, allocations: 81.37 MB / 1.634 GB, free: 159.3 MB / 0.67 GB Notification: Performance of prepare postOptimizeDAE: time 0.0002964/5.077, allocations: 68 kB / 1.634 GB, free: 159.2 MB / 0.67 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0003655/5.077, allocations: 148 kB / 1.634 GB, free: 159.1 MB / 0.67 GB Notification: Performance of postOpt tearingSystem (initialization): time 0.05827/5.136, allocations: 22.37 MB / 1.656 GB, free: 136.9 MB / 0.67 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.01782/5.154, allocations: 3.726 MB / 1.659 GB, free: 133.1 MB / 0.67 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.1871/5.341, allocations: 92.37 MB / 1.75 GB, free: 40.55 MB / 0.67 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.02067/5.361, allocations: 0.8235 MB / 1.75 GB, free: 39.73 MB / 0.67 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.006307/5.368, allocations: 0.9367 MB / 1.751 GB, free: 38.79 MB / 0.67 GB Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 677 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (1841): * Single equations (assignments): 1838 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 3 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 2 systems {(1,3,100.0%), (33,10,82.4%)} * Non-linear torn systems (#iteration vars, #inner vars): 1 system {(1,3)} Notification: Performance of prepare postOptimizeDAE: time 0.01672/5.384, allocations: 5.373 MB / 1.757 GB, free: 33.5 MB / 0.67 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.006635/5.391, allocations: 1.06 MB / 1.758 GB, free: 33.02 MB / 0.67 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.6009/5.992, allocations: 48.42 MB / 1.805 GB, free: 196.7 MB / 0.67 GB Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0002325/5.992, allocations: 120.4 kB / 1.805 GB, free: 196.7 MB / 0.67 GB Notification: Performance of postOpt constantLinearSystem (simulation): time 0.000237/5.992, allocations: 21.55 kB / 1.805 GB, free: 196.7 MB / 0.67 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.0004841/5.993, allocations: 62.19 kB / 1.805 GB, free: 196.7 MB / 0.67 GB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.3147/6.308, allocations: 68.82 MB / 1.872 GB, free: 172.8 MB / 0.67 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0001269/6.308, allocations: 3.938 kB / 1.872 GB, free: 172.8 MB / 0.67 GB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.01494/6.323, allocations: 2.424 MB / 1.875 GB, free: 172.2 MB / 0.67 GB Notification: Performance of postOpt tearingSystem (simulation): time 0.03279/6.355, allocations: 11.88 MB / 1.886 GB, free: 165 MB / 0.67 GB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.004887/6.36, allocations: 478.1 kB / 1.887 GB, free: 164.5 MB / 0.67 GB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.1073/6.468, allocations: 45.71 MB / 1.931 GB, free: 118.6 MB / 0.67 GB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 4.027e-06/6.468, allocations: 4.031 kB / 1.931 GB, free: 118.6 MB / 0.67 GB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.295/6.763, allocations: 62.61 MB / 1.992 GB, free: 56.42 MB / 0.67 GB Notification: Performance of postOpt removeConstants (simulation): time 0.01159/6.774, allocations: 3.383 MB / 1.996 GB, free: 53.67 MB / 0.67 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.005637/6.78, allocations: 295.9 kB / 1.996 GB, free: 53.38 MB / 0.67 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.01409/6.794, allocations: 0.5111 MB / 1.997 GB, free: 52.87 MB / 0.67 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.007185/6.801, allocations: 1.557 MB / 1.998 GB, free: 51.3 MB / 0.67 GB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.003706/6.805, allocations: 475.6 kB / 1.999 GB, free: 50.84 MB / 0.67 GB Notification: Performance of sorting global known variables: time 0.01179/6.817, allocations: 6.481 MB / 2.005 GB, free: 44.39 MB / 0.67 GB Notification: Performance of sort global known variables: time 2.3e-07/6.817, allocations: 0 / 2.005 GB, free: 44.39 MB / 0.67 GB Notification: Performance of remove unused functions: time 0.03085/6.847, allocations: 6.707 MB / 2.011 GB, free: 38.15 MB / 0.67 GB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 15 * Number of states: 60 (solution.temperature,O2_free.logn,H2O.logn,relaxed.OxyHm[1].logn,relaxed.OxyHm[2].logn,relaxed.OxyHm[3].logn,relaxed.OxyHm[4].logn,relaxed.DeoxyHm[1].logn,relaxed.DeoxyHm[2].logn,relaxed.DeoxyHm[3].logn,relaxed.DeoxyHm[4].logn,relaxed.HmAH[1].logn,relaxed.HmAH[2].logn,relaxed.HmAH[3].logn,relaxed.HmAH[4].logn,relaxed.HmA[1].logn,relaxed.HmA[2].logn,relaxed.HmA[3].logn,relaxed.HmA[4].logn,relaxed.HmNH3[1].logn,relaxed.HmNH3[2].logn,relaxed.HmNH3[3].logn,relaxed.HmNH3[4].logn,relaxed.HmNH2[1].logn,relaxed.HmNH2[2].logn,relaxed.HmNH2[3].logn,relaxed.HmNH2[4].logn,relaxed.HmNHCOO[1].logn,relaxed.HmNHCOO[2].logn,relaxed.HmNHCOO[3].logn,relaxed.HmNHCOO[4].logn,tensed.OxyHm[1].logn,tensed.OxyHm[2].logn,tensed.OxyHm[3].logn,tensed.OxyHm[4].logn,tensed.DeoxyHm[1].logn,tensed.DeoxyHm[2].logn,tensed.DeoxyHm[3].logn,tensed.DeoxyHm[4].logn,tensed.HmAH[1].logn,tensed.HmAH[2].logn,tensed.HmAH[3].logn,tensed.HmAH[4].logn,tensed.HmA[1].logn,tensed.HmA[2].logn,tensed.HmA[3].logn,tensed.HmA[4].logn,tensed.HmNH3[1].logn,tensed.HmNH3[2].logn,tensed.HmNH3[3].logn,tensed.HmNH3[4].logn,tensed.HmNH2[1].logn,tensed.HmNH2[2].logn,tensed.HmNH2[3].logn,tensed.HmNH2[4].logn,tensed.HmNHCOO[1].logn,tensed.HmNHCOO[2].logn,tensed.HmNHCOO[3].logn,tensed.HmNHCOO[4].logn,CO2_free.logn) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (1234): * Single equations (assignments): 1231 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 3 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 2 systems {(1,3,100.0%), (33,10,82.4%)} * Non-linear torn systems (#iteration vars, #inner vars): 1 system {(1,3)} Notification: Performance of Backend phase and start with SimCode phase: time 0.01154/6.859, allocations: 3.632 MB / 2.015 GB, free: 34.91 MB / 0.67 GB Notification: Performance of simCode: created initialization part: time 0.087/6.946, allocations: 26.39 MB / 2.041 GB, free: 8.512 MB / 0.67 GB Notification: Performance of simCode: created event and clocks part: time 1.052e-05/6.946, allocations: 4 kB / 2.041 GB, free: 8.508 MB / 0.67 GB Notification: Performance of simCode: created simulation system equations: time 0.3372/7.283, allocations: 13.61 MB / 2.054 GB, free: 202.5 MB / 0.67 GB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.01693/7.3, allocations: 2.463 MB / 2.056 GB, free: 202.4 MB / 0.67 GB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.0919/7.392, allocations: 38.34 MB / 2.094 GB, free: 192.2 MB / 0.67 GB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.01502/7.407, allocations: 9.623 MB / 2.103 GB, free: 190 MB / 0.67 GB Notification: Performance of simCode: alias equations: time 0.01655/7.424, allocations: 5.16 MB / 2.108 GB, free: 189.9 MB / 0.67 GB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.00632/7.43, allocations: 1.416 MB / 2.11 GB, free: 189.8 MB / 0.67 GB Notification: Performance of SimCode: time 1.282e-06/7.43, allocations: 2 kB / 2.11 GB, free: 189.8 MB / 0.67 GB Notification: Performance of Templates: time 0.7127/8.143, allocations: 345.8 MB / 2.447 GB, free: 101.8 MB / 0.67 GB " [Timeout remaining time 652] make -j1 -f Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation.makefile [Timeout 660] (rm -f Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation.pipe ; mkfifo Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation.pipe ; head -c 1048576 < Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation.pipe >> ../files/Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation.sim & ./Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation -abortSlowSimulation -alarm=480 -s cvode -lv LOG_STATS > Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation.pipe 2>&1) [Timeout 480] [Calling sys.exit(0), Time elapsed: 23.683351934989332] Failed to read output from testmodel.py, exit status != 0: 8.15253628299979 8.161062493 6.753965611 Calling exit ...