Environment - simulationEnvironment: startTime=0 stopTime=15000 tolerance=1e-06 numberOfIntervals=2500 stepSize=6 Regular simulation: ./Chemical_Chemical.Obsolete.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC -abortSlowSimulation -alarm=480 -s cvode -lv LOG_STATS LOG_ASSERT | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14349:5-14350:37:writable] | | | | The following assertion has been violated at time 0.000000 | | | | ((solution.mass >= 0.0 and solution.mass <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= solution.mass <= 0.0, has value: 1.00007" LOG_ASSERT | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14161:5-14162:124:writable] | | | | The following assertion has been violated at time 0.000000 | | | | ((R0_in_R.subunitSolution.nj >= 0.0)) --> "Variable violating min constraint: 0.0 <= R0_in_R.subunitSolution.nj, has value: -6.5552e-07" LOG_ASSERT | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14166:5-14167:122:writable] | | | | The following assertion has been violated at time 0.000000 | | | | ((R0_in_R.subunitSolution.mj >= 0.0 and R0_in_R.subunitSolution.mj <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= R0_in_R.subunitSolution.mj <= 0.0, has value: -1.18094e-08" LOG_ASSERT | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14161:5-14162:124:writable] | | | | The following assertion has been violated at time 0.000000 | | | | ((T0_in_T.subunitSolution.nj >= 0.0)) --> "Variable violating min constraint: 0.0 <= T0_in_T.subunitSolution.nj, has value: -0.00399934" LOG_ASSERT | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14166:5-14167:122:writable] | | | | The following assertion has been violated at time 0.000000 | | | | ((T0_in_T.subunitSolution.mj >= 0.0 and T0_in_T.subunitSolution.mj <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= T0_in_T.subunitSolution.mj <= 0.0, has value: -7.20493e-05" LOG_ASSERT | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14160:5-14160:67:writable] | | | | The following assertion has been violated at time 0.000000 | | | | ((DeoxyRHm[1].solution.n >= 0.0 and DeoxyRHm[1].solution.n <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= DeoxyRHm[1].solution.n <= 0.0, has value: 1.01629" LOG_ASSERT | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:379:7-381:72:writable] | | | | The following assertion has been violated at time 0.000000 | | | | ((H2O.SelfClustering_K >= 0.0 and H2O.SelfClustering_K <= 1.0)) --> "Variable violating min/max constraint: 0.0 <= H2O.SelfClustering_K <= 1.0, has value: 53.7264" LOG_SUCCESS | info | The initialization finished successfully without homotopy method. LOG_STATS | info | ### STATISTICS ### | | | | | timer | | | | | | 0.0114831s reading init.xml | | | | | | 0.000907737s reading info.xml | | | | | | 0.000131477s [ 0.2%] pre-initialization | | | | | | 0.000320293s [ 0.5%] initialization | | | | | | 8.166e-06s [ 0.0%] steps | | | | | | 0.00759416s [ 12.1%] solver (excl. callbacks) | | | | | | 0s [ 0.0%] creating output-file | | | | | | 0.00138517s [ 2.2%] event-handling | | | | | | 0.00255001s [ 4.0%] overhead | | | | | | 0.0509956s [ 81.0%] simulation | | | | | | 0.0629849s [100.0%] total | | | | | events | | | | | | 244 state events | | | | | | 0 time events | | | | | solver: cvode | | | | | | 4911 steps taken | | | | | | 6891 calls of functionODE | | | | | | 371 evaluations of jacobian | | | | | | 91 error test failures | | | | | | 17 convergence test failures | | | | | | 0s time of jacobian evaluation LOG_SUCCESS | info | The simulation finished successfully.