Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0009023/0.0009023, allocations: 86.05 kB / 19.87 MB, free: 4.617 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.0009548/0.0009548, allocations: 169.7 kB / 23.27 MB, free: 1.223 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.969/0.969, allocations: 177.2 MB / 203.7 MB, free: 5.504 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo): time 0.06482/0.06482, allocations: 12.76 MB / 273 MB, free: 124 kB / 250.7 MB
"
[Timeout remaining time 180]
Using package Bodylight with version 1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC,tolerance=1e-14,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC")
translateModel(Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC,tolerance=1e-14,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.223e-06/1.223e-06, allocations: 0 / 347.2 MB, free: 0.9648 MB / 266.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 2.01e-05/2.132e-05, allocations: 12.36 kB / 347.2 MB, free: 0.9531 MB / 266.7 MB
Notification: Performance of NFInst.instantiate(Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC): time 0.004736/0.004758, allocations: 5.742 MB / 352.9 MB, free: 11.18 MB / 282.7 MB
Notification: Performance of NFInst.instExpressions: time 0.00608/0.01084, allocations: 5.671 MB / 358.6 MB, free: 5.488 MB / 282.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.0005289/0.01137, allocations: 43.56 kB / 358.6 MB, free: 5.445 MB / 282.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.0003359/0.0117, allocations: 186.3 kB / 358.8 MB, free: 5.262 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyRHm.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyRHm.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyRHm.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyRHm.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyRHm.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyRHm.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyTHm.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyTHm.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyTHm.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyTHm.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyTHm.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyTHm.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.oxygen_unbound.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit'.
Notification: Performance of NFTyping.typeBindings: time 0.001958/0.01366, allocations: 1.033 MB / 359.8 MB, free: 4.223 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyRHm.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyRHm.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyRHm.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyRHm.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyTHm.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyTHm.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyTHm.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyTHm.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.oxygen_unbound.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.oxygen_unbound.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
Notification: Performance of NFTyping.typeClassSections: time 0.001712/0.01537, allocations: 1.013 MB / 360.9 MB, free: 3.207 MB / 282.7 MB
Notification: Performance of NFFlatten.flatten: time 0.002187/0.01756, allocations: 3.248 MB / 364.1 MB, free: 15.95 MB / 298.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0006665/0.01823, allocations: 0.5662 MB / 364.7 MB, free: 15.34 MB / 298.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.001646/0.01987, allocations: 1.641 MB / 366.3 MB, free: 13.7 MB / 298.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.001416/0.02129, allocations: 1.524 MB / 367.8 MB, free: 12.17 MB / 298.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0002708/0.02156, allocations: 168 kB / 368 MB, free: 12.01 MB / 298.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.0003316/0.02189, allocations: 184 kB / 368.2 MB, free: 11.83 MB / 298.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0004092/0.0223, allocations: 0.6811 MB / 368.9 MB, free: 11.14 MB / 298.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.0007902/0.02309, allocations: 0.8648 MB / 369.7 MB, free: 10.28 MB / 298.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.001816/0.02491, allocations: 2.55 MB / 372.3 MB, free: 7.719 MB / 298.7 MB
Notification: Performance of FrontEnd - DAE generated: time 4.008e-06/0.02491, allocations: 0 / 372.3 MB, free: 7.719 MB / 298.7 MB
Notification: Performance of FrontEnd: time 9.31e-07/0.02491, allocations: 0 / 372.3 MB, free: 7.719 MB / 298.7 MB
Notification: Performance of Transformations before backend: time 3.286e-05/0.02494, allocations: 0 / 372.3 MB, free: 7.719 MB / 298.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 387
 * Number of variables: 387
Notification: Performance of Generate backend data structure: time 0.003382/0.02833, allocations: 3.194 MB / 375.5 MB, free: 4.465 MB / 298.7 MB
Notification: Performance of prepare preOptimizeDAE: time 3.71e-05/0.02836, allocations: 15.98 kB / 375.5 MB, free: 4.449 MB / 298.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0007692/0.02913, allocations: 479 kB / 376 MB, free: 3.98 MB / 298.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.001697/0.03083, allocations: 1.532 MB / 377.5 MB, free: 2.383 MB / 298.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 7.156e-05/0.0309, allocations: 123.4 kB / 377.6 MB, free: 2.262 MB / 298.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.00016/0.03106, allocations: 168.4 kB / 377.8 MB, free: 2.098 MB / 298.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.001228/0.03229, allocations: 1.156 MB / 378.9 MB, free: 0.8711 MB / 298.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 2.557e-05/0.03231, allocations: 15.88 kB / 378.9 MB, free: 0.8555 MB / 298.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 8.419e-05/0.0324, allocations: 60 kB / 379 MB, free: 0.7969 MB / 298.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 5.472e-05/0.03245, allocations: 62.97 kB / 379.1 MB, free: 0.7344 MB / 298.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0006825/0.03314, allocations: 488.3 kB / 379.5 MB, free: 256 kB / 298.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.006029/0.03916, allocations: 5.472 MB / 385 MB, free: 10.62 MB / 314.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.0007242/0.03989, allocations: 0.7208 MB / 385.7 MB, free: 9.805 MB / 314.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0003572/0.04025, allocations: 307.3 kB / 386 MB, free: 9.473 MB / 314.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 5.213e-05/0.0403, allocations: 21 kB / 386 MB, free: 9.449 MB / 314.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 3.217e-05/0.04033, allocations: 62.27 kB / 386.1 MB, free: 9.379 MB / 314.7 MB
Notification: Performance of pre-optimization done (n=118): time 3.095e-06/0.04033, allocations: 4 kB / 386.1 MB, free: 9.375 MB / 314.7 MB
Notification: Performance of matching and sorting (n=183): time 0.01273/0.05306, allocations: 4.727 MB / 390.8 MB, free: 4.625 MB / 314.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 9.277e-05/0.05315, allocations: 257.3 kB / 391.1 MB, free: 4.316 MB / 314.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.001607/0.05476, allocations: 2.096 MB / 393.2 MB, free: 2.188 MB / 314.7 MB
Notification: Performance of collectPreVariables (initialization): time 0.0001339/0.05489, allocations: 61.7 kB / 393.2 MB, free: 2.121 MB / 314.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0006938/0.05559, allocations: 1.268 MB / 394.5 MB, free: 0.8398 MB / 314.7 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0004755/0.05606, allocations: 0.6858 MB / 395.2 MB, free: 152 kB / 314.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.000556/0.05662, allocations: 490.1 kB / 395.7 MB, free: 15.66 MB / 330.7 MB
Notification: Performance of setup shared object (initialization): time 0.0001035/0.05672, allocations: 480.7 kB / 396.2 MB, free: 15.19 MB / 330.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0005266/0.05725, allocations: 284.3 kB / 396.4 MB, free: 14.91 MB / 330.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.0009157/0.05817, allocations: 1.239 MB / 397.7 MB, free: 13.29 MB / 330.7 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.001684/0.05985, allocations: 1.745 MB / 399.4 MB, free: 11.17 MB / 330.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.567e-05/0.05987, allocations: 8 kB / 399.4 MB, free: 11.16 MB / 330.7 MB
Notification: Performance of matching and sorting (n=291) (initialization): time 0.008193/0.06806, allocations: 2.992 MB / 402.4 MB, free: 8.148 MB / 330.7 MB
Notification: Performance of prepare postOptimizeDAE: time 3.099e-05/0.06809, allocations: 16 kB / 402.4 MB, free: 8.133 MB / 330.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 2.799e-05/0.06812, allocations: 16 kB / 402.4 MB, free: 8.117 MB / 330.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 0.01099/0.07911, allocations: 2.71 MB / 405.2 MB, free: 5.395 MB / 330.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.001327/0.08044, allocations: 423.4 kB / 405.6 MB, free: 4.98 MB / 330.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.1526/0.2331, allocations: 9.317 MB / 414.9 MB, free: 58.7 MB / 330.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.001282/0.2344, allocations: 111.4 kB / 415 MB, free: 58.7 MB / 330.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0001371/0.2345, allocations: 76.91 kB / 415.1 MB, free: 58.7 MB / 330.7 MB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 89
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (205):
 * Single equations (assignments): 203
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 2
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 1 system
   {(8,36,34.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(10,34)}
Notification: Performance of prepare postOptimizeDAE: time 0.0005032/0.235, allocations: 296.1 kB / 415.4 MB, free: 58.54 MB / 330.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0003739/0.2354, allocations: 303.7 kB / 415.7 MB, free: 58.54 MB / 330.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.0003568/0.2357, allocations: 400.5 kB / 416 MB, free: 58.51 MB / 330.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.212e-05/0.2358, allocations: 18.97 kB / 416.1 MB, free: 58.51 MB / 330.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 3.146e-05/0.2358, allocations: 8.656 kB / 416.1 MB, free: 58.51 MB / 330.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.446e-05/0.2358, allocations: 12.2 kB / 416.1 MB, free: 58.51 MB / 330.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.011/0.2468, allocations: 5.749 MB / 421.8 MB, free: 57.33 MB / 330.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 1.274e-05/0.2468, allocations: 15.88 kB / 421.8 MB, free: 57.33 MB / 330.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0003745/0.2472, allocations: 220.8 kB / 422.1 MB, free: 57.33 MB / 330.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 0.007656/0.2548, allocations: 2.545 MB / 424.6 MB, free: 57.28 MB / 330.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0001139/0.255, allocations: 55.36 kB / 424.7 MB, free: 57.28 MB / 330.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.01093/0.2659, allocations: 8.937 MB / 433.6 MB, free: 51.85 MB / 330.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 8.206e-06/0.2659, allocations: 29.06 kB / 433.6 MB, free: 51.85 MB / 330.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.006696/0.2726, allocations: 4.455 MB / 438.1 MB, free: 47.66 MB / 330.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.0005991/0.2732, allocations: 455.9 kB / 438.5 MB, free: 47.21 MB / 330.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0002033/0.2734, allocations: 55.98 kB / 438.6 MB, free: 47.16 MB / 330.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0007826/0.2742, allocations: 71.72 kB / 438.7 MB, free: 47.09 MB / 330.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0003208/0.2745, allocations: 232.2 kB / 438.9 MB, free: 46.86 MB / 330.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 7.618e-05/0.2746, allocations: 60 kB / 438.9 MB, free: 46.8 MB / 330.7 MB
Notification: Performance of sorting global known variables: time 0.0007071/0.2753, allocations: 1.037 MB / 440 MB, free: 45.85 MB / 330.7 MB
Notification: Performance of sort global known variables: time 8e-08/0.2753, allocations: 0 / 440 MB, free: 45.85 MB / 330.7 MB
Notification: Performance of remove unused functions: time 0.0018/0.2771, allocations: 1.008 MB / 441 MB, free: 44.84 MB / 330.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 72
 * Number of states: 7 (totalHb.state[1],T0_in_T.state[3],T0_in_T.state[2],T0_in_T.state[1],R0_in_R.state[3],R0_in_R.state[2],R0_in_R.state[1])
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (111):
 * Single equations (assignments): 109
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 2
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 1 system
   {(8,36,34.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(10,34)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.0001883/0.2773, allocations: 169.2 kB / 441.1 MB, free: 44.68 MB / 330.7 MB
Notification: Performance of simCode: created initialization part: time 0.003379/0.2806, allocations: 2.472 MB / 443.6 MB, free: 42.22 MB / 330.7 MB
Notification: Performance of simCode: created event and clocks part: time 9.388e-06/0.2807, allocations: 0 / 443.6 MB, free: 42.22 MB / 330.7 MB
Notification: Performance of simCode: created simulation system equations: time 0.002447/0.2831, allocations: 1.751 MB / 445.4 MB, free: 40.48 MB / 330.7 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.001595/0.2847, allocations: 0.5123 MB / 445.9 MB, free: 40 MB / 330.7 MB
Error: Error parsing unit kcal: Unit not found
Error: Error parsing unit kcal/min: Unit not found
Error: Error parsing unit kcal/mol: Unit not found
Error: Error parsing unit %: Parse error
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.004946/0.2896, allocations: 5.098 MB / 451 MB, free: 34.62 MB / 330.7 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.000507/0.2902, allocations: 0.7157 MB / 451.7 MB, free: 33.88 MB / 330.7 MB
Notification: Performance of simCode: alias equations: time 0.0004264/0.2906, allocations: 228.1 kB / 451.9 MB, free: 33.65 MB / 330.7 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0005399/0.2911, allocations: 485.9 kB / 452.4 MB, free: 33.18 MB / 330.7 MB
Notification: Performance of SimCode: time 1.152e-06/0.2911, allocations: 0 / 452.4 MB, free: 33.18 MB / 330.7 MB
Notification: Performance of Templates: time 0.06766/0.3588, allocations: 81.72 MB / 0.5216 GB, free: 15.78 MB / 394.7 MB
"
[Timeout remaining time 660]
make -j1 -f Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.makefile [Timeout 660]
(rm -f Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.pipe ; mkfifo Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.pipe ; head -c 1048576 < Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.pipe >> ../files/Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.sim & (cd run_cvode && ../Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC -abortSlowSimulation -alarm=240  -lv LOG_STATS -inputPath=.. -s cvode) > Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.pipe 2>&1) [Timeout 240]
(rm -f Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC_gbode.pipe ; mkfifo Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC_gbode.pipe ; head -c 1048576 < Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC_gbode.pipe >> /var/lib/jenkins/ws/OpenModelicaLibraryTestingWork/OpenModelicaLibraryTesting/files/Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC_gbode.sim & (cd run_gbode && ../Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC -abortSlowSimulation -alarm=240  -lv LOG_STATS -inputPath=.. -s gbode -gbm=radauIIA3) > Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC_gbode.pipe 2>&1) [Timeout 240]
(rm -f Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC_ida.pipe ; mkfifo Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC_ida.pipe ; head -c 1048576 < Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC_ida.pipe >> /var/lib/jenkins/ws/OpenModelicaLibraryTestingWork/OpenModelicaLibraryTesting/files/Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC_ida.sim & (cd run_ida && ../Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC -abortSlowSimulation -alarm=240  -lv LOG_STATS -inputPath=.. -s ida) > Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC_ida.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 5.430503256618977]