Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo", uses=false)
Using package BioChem with version 1.1.2 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo)
Using package Modelica with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo)
Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo)
Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo)
Running command: translateModel(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel,tolerance=1e-06,outputFormat="empty",numberOfIntervals=-2,variableFilter="",fileNamePrefix="BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel")
translateModel(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel,tolerance=1e-06,outputFormat="empty",numberOfIntervals=-2,variableFilter="",fileNamePrefix="BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel")
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.001646/0.001646, allocations: 113.6 kB / 16.37 MB, free: 6.012 MB / 14.72 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.001491/0.001491, allocations: 191.2 kB / 17.3 MB, free: 5.613 MB / 14.72 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo): time 1.395/1.395, allocations: 222.9 MB / 241 MB, free: 15.16 MB / 206.1 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo): time 0.07879/0.07879, allocations: 12.27 MB / 303.4 MB, free: 3.242 MB / 238.1 MB
Warning: Ignoring unknown experiment annotation option: Algorithm = "dassl"
Notification: Performance of FrontEnd - loaded program: time 0.001489/0.001489, allocations: 59.91 kB / 367.2 MB, free: 3.395 MB / 302.1 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.2347/0.2362, allocations: 52.1 MB / 419.3 MB, free: 21.66 MB / 302.1 MB
Notification: Performance of NFInst.instantiate(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel): time 0.009554/0.2458, allocations: 8.725 MB / 428 MB, free: 12.92 MB / 302.1 MB
Notification: Performance of NFInst.instExpressions: time 0.004543/0.2504, allocations: 2.366 MB / 430.4 MB, free: 10.58 MB / 302.1 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.001563/0.252, allocations: 116 kB / 430.5 MB, free: 10.46 MB / 302.1 MB
Notification: Performance of NFTyping.typeComponents: time 0.001041/0.2531, allocations: 380.9 kB / 430.9 MB, free: 10.09 MB / 302.1 MB
Notification: Performance of NFTyping.typeBindings: time 0.001668/0.2548, allocations: 0.5171 MB / 431.4 MB, free: 9.578 MB / 302.1 MB
Notification: Performance of NFTyping.typeClassSections: time 0.0009355/0.2558, allocations: 0.5753 MB / 432 MB, free: 9.004 MB / 302.1 MB
Notification: Performance of NFFlatten.flatten: time 0.001565/0.2574, allocations: 2.333 MB / 434.3 MB, free: 6.66 MB / 302.1 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.001279/0.2586, allocations: 1.285 MB / 435.6 MB, free: 5.336 MB / 302.1 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.0008181/0.2595, allocations: 0.954 MB / 436.5 MB, free: 4.379 MB / 302.1 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.0007189/0.2602, allocations: 1.077 MB / 437.6 MB, free: 3.297 MB / 302.1 MB
Notification: Performance of NFPackage.collectConstants: time 0.000239/0.2604, allocations: 316 kB / 437.9 MB, free: 2.988 MB / 302.1 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.0002602/0.2607, allocations: 322.8 kB / 438.2 MB, free: 2.676 MB / 302.1 MB
Notification: Performance of NFScalarize.scalarize: time 0.000258/0.261, allocations: 0.5726 MB / 438.8 MB, free: 2.102 MB / 302.1 MB
Notification: Performance of NFVerifyModel.verify: time 0.0006954/0.2617, allocations: 1.268 MB / 440.1 MB, free: 0.8281 MB / 302.1 MB
Notification: Performance of NFConvertDAE.convert: time 0.00239/0.2641, allocations: 3.424 MB / 443.5 MB, free: 13.4 MB / 318.1 MB
Notification: Performance of FrontEnd - DAE generated: time 5.43e-06/0.2641, allocations: 4 kB / 443.5 MB, free: 13.39 MB / 318.1 MB
Notification: Performance of FrontEnd: time 1.823e-06/0.2641, allocations: 0 / 443.5 MB, free: 13.39 MB / 318.1 MB
Notification: Performance of Transformations before backend: time 4.61e-05/0.2642, allocations: 0 / 443.5 MB, free: 13.39 MB / 318.1 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 687
 * Number of variables: 687
Notification: Performance of Generate backend data structure: time 0.004035/0.2682, allocations: 2.348 MB / 445.9 MB, free: 11 MB / 318.1 MB
Notification: Performance of prepare preOptimizeDAE: time 3.786e-05/0.2683, allocations: 12.03 kB / 445.9 MB, free: 10.99 MB / 318.1 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0003213/0.2686, allocations: 238.1 kB / 446.1 MB, free: 10.76 MB / 318.1 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.0003639/0.269, allocations: 413.2 kB / 446.5 MB, free: 10.31 MB / 318.1 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.000239/0.2692, allocations: 257.4 kB / 446.7 MB, free: 10.05 MB / 318.1 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0003297/0.2695, allocations: 280.2 kB / 447 MB, free: 9.773 MB / 318.1 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.003728/0.2733, allocations: 2.397 MB / 449.4 MB, free: 7.289 MB / 318.1 MB
Notification: Performance of preOpt findStateOrder (simulation): time 6.163e-05/0.2734, allocations: 7.906 kB / 449.4 MB, free: 7.281 MB / 318.1 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001717/0.2735, allocations: 108 kB / 449.5 MB, free: 7.176 MB / 318.1 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 5.252e-05/0.2736, allocations: 64 kB / 449.6 MB, free: 7.113 MB / 318.1 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.002978/0.2766, allocations: 1.683 MB / 451.3 MB, free: 5.418 MB / 318.1 MB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.01136/0.2879, allocations: 8.364 MB / 459.6 MB, free: 12.74 MB / 334.1 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.002165/0.2901, allocations: 1.582 MB / 461.2 MB, free: 11.04 MB / 334.1 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0009003/0.291, allocations: 0.5456 MB / 461.8 MB, free: 10.48 MB / 334.1 MB
Notification: Performance of preOpt evalFunc (simulation): time 7.281e-05/0.2911, allocations: 17.25 kB / 461.8 MB, free: 10.46 MB / 334.1 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 3.69e-05/0.2912, allocations: 55.88 kB / 461.8 MB, free: 10.4 MB / 334.1 MB
Notification: Performance of pre-optimization done (n=139): time 3.156e-06/0.2912, allocations: 0 / 461.8 MB, free: 10.4 MB / 334.1 MB
Notification: Performance of matching and sorting (n=171): time 0.02447/0.3156, allocations: 9.115 MB / 471 MB, free: 1.23 MB / 334.1 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 9.601e-05/0.3158, allocations: 183.5 kB / 471.1 MB, free: 1.016 MB / 334.1 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0005654/0.3164, allocations: 489.7 kB / 471.6 MB, free: 0.5312 MB / 334.1 MB
Notification: Performance of collectPreVariables (initialization): time 9.009e-05/0.3165, allocations: 53.7 kB / 471.7 MB, free: 484 kB / 334.1 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0005437/0.317, allocations: 0.9487 MB / 472.6 MB, free: 15.51 MB / 350.1 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0004859/0.3175, allocations: 0.6238 MB / 473.2 MB, free: 14.88 MB / 350.1 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0004718/0.318, allocations: 348 kB / 473.6 MB, free: 14.53 MB / 350.1 MB
Notification: Performance of setup shared object (initialization): time 0.0001256/0.3181, allocations: 326 kB / 473.9 MB, free: 14.2 MB / 350.1 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.00119/0.3193, allocations: 0.6693 MB / 474.6 MB, free: 13.53 MB / 350.1 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.001453/0.3208, allocations: 1.184 MB / 475.8 MB, free: 12.07 MB / 350.1 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.01582/0.3366, allocations: 4.728 MB / 480.5 MB, free: 7.078 MB / 350.1 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.355e-05/0.3367, allocations: 8 kB / 480.5 MB, free: 7.07 MB / 350.1 MB
Notification: Performance of matching and sorting (n=291) (initialization): time 0.003505/0.3402, allocations: 2.11 MB / 482.6 MB, free: 4.953 MB / 350.1 MB
Notification: Performance of prepare postOptimizeDAE: time 3.226e-05/0.3402, allocations: 19.94 kB / 482.6 MB, free: 4.934 MB / 350.1 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 2.326e-05/0.3402, allocations: 16 kB / 482.6 MB, free: 4.918 MB / 350.1 MB
Notification: Performance of postOpt tearingSystem (initialization): time 4.706e-05/0.3403, allocations: 35.94 kB / 482.7 MB, free: 4.883 MB / 350.1 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.002575/0.3429, allocations: 0.6439 MB / 483.3 MB, free: 4.238 MB / 350.1 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 5.061e-05/0.3429, allocations: 43.86 kB / 483.4 MB, free: 4.195 MB / 350.1 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0008785/0.3438, allocations: 75.98 kB / 483.4 MB, free: 4.121 MB / 350.1 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0001307/0.344, allocations: 92 kB / 483.5 MB, free: 4.031 MB / 350.1 MB
Warning: Assuming fixed start value for the following 41 variables:
         V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         adiposeTissue1.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         GlucoseRenalExcretion.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         GlucoseRenalExcretion.E.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         UtilizationMuscleTissue.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         UtilizationMuscleTissue.U_idm.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         GastroIntestinalTract.GlucoseIntake.c:VARIABLE(min = 0.0 start = 78000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         TissueGlucose.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         PlasmaGlucose.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         PlasmaInsulin.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         LiverInsulin.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         EndogenousGlucoseProduction.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         EndogenousGlucoseProduction.I_po.c:VARIABLE(min = 0.0 start = 3.6 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         BetaCell.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         BetaCell.Y.c:VARIABLE(min = 0.0 start = 0.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         adiposeTissue1.adipocyte1.IR.c:VARIABLE(min = 0.0 start = 2.34e12 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.IRS1.c:VARIABLE(min = 0.0 start = 1.61e10 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.PKB.c:VARIABLE(min = 0.0 start = 1.68e7 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.GLUT4_CYTOSOL.c:VARIABLE(min = 0.0 start = 5.8e8 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.IR_insulin.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         adiposeTissue1.adipocyte1.GLUT4_MEMBRANE.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         adiposeTissue1.adipocyte1.GlucoseUtilization.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         adiposeTissue1.adipocyte1.PKB_P.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         adiposeTissue1.adipocyte1.IRS1_P.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         BetaCell.G_p.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         EndogenousGlucoseProduction.End.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         EndogenousGlucoseProduction.I_d.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         EndogenousGlucoseProduction.I_1.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         LiverInsulin.Deg.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         LiverInsulin.I_l.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         UtilizationMuscleTissue.UtilizationReaction.X:VARIABLE(min = 0.0 unit = "mol/l" fixed = true )  type: Real
         PlasmaInsulin.Deg.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         PlasmaInsulin.I_p.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         PlasmaGlucose.U_ii.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         TissueGlucose.G_t.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.End.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.Q_sto1.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.Q_gut.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.Q_sto2.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 86
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (291):
 * Single equations (assignments): 291
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of prepare postOptimizeDAE: time 0.001016/0.345, allocations: 0.6091 MB / 484.1 MB, free: 3.441 MB / 350.1 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0002354/0.3452, allocations: 98.81 kB / 484.2 MB, free: 3.344 MB / 350.1 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.002541/0.3478, allocations: 1.432 MB / 485.7 MB, free: 1.898 MB / 350.1 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.42e-05/0.3478, allocations: 20 kB / 485.7 MB, free: 1.879 MB / 350.1 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 7.845e-06/0.3478, allocations: 4 kB / 485.7 MB, free: 1.875 MB / 350.1 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.589e-05/0.3479, allocations: 7.969 kB / 485.7 MB, free: 1.867 MB / 350.1 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.006374/0.3542, allocations: 3.573 MB / 489.3 MB, free: 14.22 MB / 366.1 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 1.076e-05/0.3543, allocations: 4 kB / 489.3 MB, free: 14.22 MB / 366.1 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.002529/0.3568, allocations: 479.5 kB / 489.7 MB, free: 13.75 MB / 366.1 MB
Notification: Performance of postOpt tearingSystem (simulation): time 1.699e-05/0.3569, allocations: 8 kB / 489.7 MB, free: 13.74 MB / 366.1 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0001418/0.357, allocations: 63.89 kB / 489.8 MB, free: 13.68 MB / 366.1 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 1.444e-05/0.357, allocations: 8 kB / 489.8 MB, free: 13.67 MB / 366.1 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 4.739e-06/0.357, allocations: 4 kB / 489.8 MB, free: 13.67 MB / 366.1 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.003761/0.3608, allocations: 2.51 MB / 492.3 MB, free: 11.14 MB / 366.1 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.0003267/0.3612, allocations: 152 kB / 492.5 MB, free: 10.97 MB / 366.1 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.00018/0.3613, allocations: 47.94 kB / 492.5 MB, free: 10.92 MB / 366.1 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0008103/0.3622, allocations: 47.98 kB / 492.6 MB, free: 10.88 MB / 366.1 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0002533/0.3624, allocations: 105.1 kB / 492.7 MB, free: 10.77 MB / 366.1 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.0001056/0.3625, allocations: 59.89 kB / 492.7 MB, free: 10.71 MB / 366.1 MB
Notification: Performance of sorting global known variables: time 0.0004329/0.363, allocations: 294.9 kB / 493 MB, free: 10.42 MB / 366.1 MB
Notification: Performance of sort global known variables: time 1.2e-07/0.363, allocations: 0 / 493 MB, free: 10.42 MB / 366.1 MB
Notification: Performance of remove unused functions: time 0.001562/0.3646, allocations: 424 kB / 493.4 MB, free: 10.01 MB / 366.1 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 7
 * Number of states: 41 (GastroIntestinalTract.V,GastroIntestinalTract.Q_sto2.n,GastroIntestinalTract.Q_gut.n,GastroIntestinalTract.Q_sto1.n,GastroIntestinalTract.GlucoseIntake.c,GastroIntestinalTract.End.n,TissueGlucose.V,TissueGlucose.G_t.n,PlasmaGlucose.V,PlasmaGlucose.U_ii.n,PlasmaInsulin.V,PlasmaInsulin.I_p.n,PlasmaInsulin.Deg.n,UtilizationMuscleTissue.UtilizationReaction.X,LiverInsulin.V,LiverInsulin.I_l.n,LiverInsulin.Deg.n,EndogenousGlucoseProduction.V,EndogenousGlucoseProduction.I_1.n,EndogenousGlucoseProduction.I_d.n,EndogenousGlucoseProduction.End.n,EndogenousGlucoseProduction.I_po.c,BetaCell.V,BetaCell.G_p.n,BetaCell.Y.c,adiposeTissue1.adipocyte1.V,adiposeTissue1.adipocyte1.IR.c,adiposeTissue1.adipocyte1.IRS1.c,adiposeTissue1.adipocyte1.IRS1_P.n,adiposeTissue1.adipocyte1.PKB.c,adiposeTissue1.adipocyte1.PKB_P.n,adiposeTissue1.adipocyte1.GlucoseUtilization.n,adiposeTissue1.adipocyte1.GLUT4_MEMBRANE.n,adiposeTissue1.adipocyte1.GLUT4_CYTOSOL.c,adiposeTissue1.adipocyte1.IR_insulin.n,V,adiposeTissue1.V,UtilizationMuscleTissue.V,UtilizationMuscleTissue.U_idm.n,GlucoseRenalExcretion.V,GlucoseRenalExcretion.E.n)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (173):
 * Single equations (assignments): 173
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of Backend phase and start with SimCode phase: time 0.0002457/0.3648, allocations: 164.8 kB / 493.6 MB, free: 9.844 MB / 366.1 MB
Notification: Performance of simCode: created initialization part: time 0.003244/0.3681, allocations: 1.66 MB / 495.2 MB, free: 8.188 MB / 366.1 MB
Notification: Performance of simCode: created event and clocks part: time 5.3e-06/0.3681, allocations: 0 / 495.2 MB, free: 8.188 MB / 366.1 MB
Notification: Performance of simCode: created simulation system equations: time 0.001288/0.3694, allocations: 0.7491 MB / 496 MB, free: 7.438 MB / 366.1 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.001325/0.3707, allocations: 231.5 kB / 496.2 MB, free: 7.219 MB / 366.1 MB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.00755/0.3783, allocations: 4.857 MB / 0.4893 GB, free: 2.309 MB / 366.1 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0009853/0.3793, allocations: 1.362 MB / 0.4907 GB, free: 0.9062 MB / 366.1 MB
Notification: Performance of simCode: alias equations: time 0.0008787/0.3802, allocations: 161.5 kB / 0.4908 GB, free: 0.7461 MB / 366.1 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0003736/0.3806, allocations: 119.3 kB / 0.4909 GB, free: 0.6289 MB / 366.1 MB
Notification: Performance of SimCode: time 7.62e-07/0.3806, allocations: 0 / 0.4909 GB, free: 0.6289 MB / 366.1 MB
Notification: Performance of Templates: time 0.02693/0.4075, allocations: 16.05 MB / 0.5066 GB, free: 0.7578 MB / 382.1 MB
make -j1 -f BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.makefile
(rm -f BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe ; mkfifo BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe ; head -c 1048576 < BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe >> ../files/BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.sim & ./BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel  -abortSlowSimulation -alarm=480 -s cvode -lv LOG_STATS > BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe 2>&1)