Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001447/0.001447, allocations: 92.2 kB / 20.19 MB, free: 4.363 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001816/0.001816, allocations: 177 kB / 23.49 MB, free: 1.059 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9503/0.9503, allocations: 177.1 MB / 203.8 MB, free: 5.652 MB / 186.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo", uses=false) [Timeout 180] "[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Examples/package.order:0:0-0:0:readonly] Warning: The package.order file does not list all .mo files and directories (containing package.mo) present in its directory. Missing names are: Paracetamol_Experiment Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo): time 1.564/1.564, allocations: 273.5 MB / 0.5213 GB, free: 14.78 MB / 458.7 MB " [Timeout remaining time 178] Using package Pharmacolibrary with version 25.09 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin,tolerance=1e-06,outputFormat="empty",numberOfIntervals=86400,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin") translateModel(Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin,tolerance=1e-06,outputFormat="empty",numberOfIntervals=86400,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin") [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 1.253e-06/1.253e-06, allocations: 0 / 0.6462 GB, free: 39.19 MB / 0.5262 GB Notification: Performance of FrontEnd - Absyn->SCode: time 1.595e-05/1.72e-05, allocations: 2.312 kB / 0.6462 GB, free: 39.19 MB / 0.5262 GB Notification: Performance of NFInst.instantiate(Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin): time 0.002273/0.00229, allocations: 2.536 MB / 0.6487 GB, free: 37.55 MB / 0.5262 GB Notification: Performance of NFInst.instExpressions: time 0.001154/0.003445, allocations: 0.9308 MB / 0.6496 GB, free: 36.96 MB / 0.5262 GB Notification: Performance of NFInst.updateImplicitVariability: time 8.481e-05/0.003529, allocations: 2.062 kB / 0.6496 GB, free: 36.96 MB / 0.5262 GB Notification: Performance of NFTyping.typeComponents: time 0.0003461/0.003876, allocations: 125.7 kB / 0.6497 GB, free: 36.91 MB / 0.5262 GB Notification: Performance of NFTyping.typeBindings: time 0.0001056/0.003981, allocations: 80.28 kB / 0.6498 GB, free: 36.89 MB / 0.5262 GB Notification: Performance of NFTyping.typeClassSections: time 0.0002892/0.00427, allocations: 141.9 kB / 0.65 GB, free: 36.82 MB / 0.5262 GB Notification: Performance of NFFlatten.flatten: time 0.0002414/0.004512, allocations: 296.7 kB / 0.6502 GB, free: 36.69 MB / 0.5262 GB Notification: Performance of NFFlatten.resolveConnections: time 0.000117/0.004629, allocations: 57.39 kB / 0.6503 GB, free: 36.65 MB / 0.5262 GB Notification: Performance of NFEvalConstants.evaluate: time 0.0001262/0.004755, allocations: 154.8 kB / 0.6504 GB, free: 36.59 MB / 0.5262 GB Notification: Performance of NFSimplifyModel.simplify: time 0.0001316/0.004887, allocations: 97.2 kB / 0.6505 GB, free: 36.55 MB / 0.5262 GB Notification: Performance of NFPackage.collectConstants: time 3.006e-05/0.004917, allocations: 20.03 kB / 0.6506 GB, free: 36.55 MB / 0.5262 GB Notification: Performance of NFFlatten.collectFunctions: time 0.000153/0.00507, allocations: 167.3 kB / 0.6507 GB, free: 36.5 MB / 0.5262 GB Notification: Performance of NFScalarize.scalarize: time 6.379e-05/0.005134, allocations: 60.89 kB / 0.6508 GB, free: 36.46 MB / 0.5262 GB Notification: Performance of NFVerifyModel.verify: time 8.134e-05/0.005215, allocations: 87.81 kB / 0.6509 GB, free: 36.43 MB / 0.5262 GB Notification: Performance of NFConvertDAE.convert: time 0.0003205/0.005535, allocations: 337.9 kB / 0.6512 GB, free: 36.28 MB / 0.5262 GB Notification: Performance of FrontEnd - DAE generated: time 2.305e-06/0.005538, allocations: 2.719 kB / 0.6512 GB, free: 36.28 MB / 0.5262 GB Notification: Performance of FrontEnd: time 5.71e-07/0.005538, allocations: 0 / 0.6512 GB, free: 36.28 MB / 0.5262 GB Notification: Performance of Transformations before backend: time 4.339e-06/0.005543, allocations: 1.469 kB / 0.6512 GB, free: 36.28 MB / 0.5262 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 40 * Number of variables: 40 Notification: Performance of Generate backend data structure: time 0.0006022/0.006145, allocations: 0.7171 MB / 0.6519 GB, free: 35.63 MB / 0.5262 GB Notification: Performance of prepare preOptimizeDAE: time 3.298e-05/0.006178, allocations: 9.094 kB / 0.6519 GB, free: 35.63 MB / 0.5262 GB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0002028/0.006381, allocations: 118.5 kB / 0.652 GB, free: 35.59 MB / 0.5262 GB Notification: Performance of preOpt evaluateParameters (simulation): time 0.0001765/0.006557, allocations: 217.1 kB / 0.6522 GB, free: 35.4 MB / 0.5262 GB Notification: Performance of preOpt simplifyIfEquations (simulation): time 1.396e-05/0.006571, allocations: 12.28 kB / 0.6522 GB, free: 35.39 MB / 0.5262 GB Notification: Performance of preOpt expandDerOperator (simulation): time 3.38e-05/0.006605, allocations: 18.25 kB / 0.6522 GB, free: 35.39 MB / 0.5262 GB Notification: Performance of preOpt clockPartitioning (simulation): time 0.0002427/0.006848, allocations: 255.1 kB / 0.6525 GB, free: 35.21 MB / 0.5262 GB Notification: Performance of preOpt findStateOrder (simulation): time 1.279e-05/0.00686, allocations: 11.03 kB / 0.6525 GB, free: 35.21 MB / 0.5262 GB Notification: Performance of preOpt replaceEdgeChange (simulation): time 1.478e-05/0.006875, allocations: 9.031 kB / 0.6525 GB, free: 35.2 MB / 0.5262 GB Notification: Performance of preOpt inlineArrayEqn (simulation): time 7.224e-06/0.006882, allocations: 3.938 kB / 0.6525 GB, free: 35.2 MB / 0.5262 GB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0001435/0.007026, allocations: 176.6 kB / 0.6527 GB, free: 35.09 MB / 0.5262 GB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.0005438/0.00757, allocations: 0.5276 MB / 0.6532 GB, free: 34.7 MB / 0.5262 GB Notification: Performance of preOpt comSubExp (simulation): time 0.0001894/0.007759, allocations: 211.7 kB / 0.6534 GB, free: 34.55 MB / 0.5262 GB Notification: Performance of preOpt resolveLoops (simulation): time 8.257e-05/0.007842, allocations: 148.2 kB / 0.6535 GB, free: 34.43 MB / 0.5262 GB Notification: Performance of preOpt evalFunc (simulation): time 1.086e-05/0.007853, allocations: 3.719 kB / 0.6535 GB, free: 34.43 MB / 0.5262 GB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0001913/0.008044, allocations: 292.3 kB / 0.6538 GB, free: 34.19 MB / 0.5262 GB Notification: Performance of pre-optimization done (n=26): time 2.104e-06/0.008046, allocations: 3.141 kB / 0.6538 GB, free: 34.19 MB / 0.5262 GB Notification: Performance of matching and sorting (n=27): time 0.0009699/0.009016, allocations: 1.095 MB / 0.6549 GB, free: 33.37 MB / 0.5262 GB Notification: Performance of inlineWhenForInitialization (initialization): time 4.745e-05/0.009063, allocations: 197.8 kB / 0.6551 GB, free: 33.14 MB / 0.5262 GB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0001875/0.009251, allocations: 330 kB / 0.6554 GB, free: 32.93 MB / 0.5262 GB Notification: Performance of collectPreVariables (initialization): time 2.105e-05/0.009272, allocations: 32.92 kB / 0.6554 GB, free: 32.89 MB / 0.5262 GB Notification: Performance of collectInitialEqns (initialization): time 7.755e-05/0.009349, allocations: 220.3 kB / 0.6556 GB, free: 32.7 MB / 0.5262 GB Notification: Performance of collectInitialBindings (initialization): time 3.865e-05/0.009388, allocations: 90.31 kB / 0.6557 GB, free: 32.63 MB / 0.5262 GB Notification: Performance of simplifyInitialFunctions (initialization): time 6.319e-05/0.009451, allocations: 67.75 kB / 0.6558 GB, free: 32.59 MB / 0.5262 GB Notification: Performance of setup shared object (initialization): time 6.433e-05/0.009516, allocations: 0.5135 MB / 0.6563 GB, free: 32.08 MB / 0.5262 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.0001061/0.009622, allocations: 188.9 kB / 0.6565 GB, free: 31.92 MB / 0.5262 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.0001212/0.009743, allocations: 278.2 kB / 0.6567 GB, free: 31.65 MB / 0.5262 GB Notification: Performance of analyzeInitialSystem (initialization): time 0.0003437/0.01009, allocations: 0.5548 MB / 0.6573 GB, free: 31.15 MB / 0.5262 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.483e-06/0.01009, allocations: 0.5312 kB / 0.6573 GB, free: 31.15 MB / 0.5262 GB Notification: Performance of matching and sorting (n=38) (initialization): time 0.0005162/0.0106, allocations: 0.5418 MB / 0.6578 GB, free: 30.78 MB / 0.5262 GB Notification: Performance of prepare postOptimizeDAE: time 4.371e-05/0.01065, allocations: 119.8 kB / 0.6579 GB, free: 30.65 MB / 0.5262 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 6.703e-06/0.01065, allocations: 13.5 kB / 0.6579 GB, free: 30.64 MB / 0.5262 GB Notification: Performance of postOpt tearingSystem (initialization): time 1.563e-05/0.01067, allocations: 4.344 kB / 0.6579 GB, free: 30.64 MB / 0.5262 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.000174/0.01084, allocations: 53.58 kB / 0.658 GB, free: 30.63 MB / 0.5262 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 7.474e-06/0.01085, allocations: 9.969 kB / 0.658 GB, free: 30.63 MB / 0.5262 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 8.494e-05/0.01094, allocations: 12.94 kB / 0.658 GB, free: 30.62 MB / 0.5262 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 5.921e-05/0.011, allocations: 50.64 kB / 0.6581 GB, free: 30.62 MB / 0.5262 GB Warning: Assuming fixed start value for the following 6 variables: dose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real dose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real central.rising:DISCRETE(fixed = true protected = true ) type: Boolean Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 7 * Number of states: 0 () * Number of discrete variables: 15 ($PRE.central.Cmin,central.Cmin,$PRE.central.Cmax,central.Cmax,$PRE.central.rising,$PRE.dose.pulse.count,$PRE.dose.pulse.T_start,CYP2C19.status,SLC22A2.status,central.rising,dose.pulse.count,dose.pulse.T_start,$whenCondition3,$whenCondition2,$whenCondition1) * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (34): * Single equations (assignments): 30 * Array equations: 0 * Algorithm blocks: 4 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of prepare postOptimizeDAE: time 0.0001504/0.01115, allocations: 287.7 kB / 0.6583 GB, free: 30.34 MB / 0.5262 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 9.229e-05/0.01124, allocations: 88.34 kB / 0.6584 GB, free: 30.32 MB / 0.5262 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 3.43e-05/0.01127, allocations: 36.02 kB / 0.6584 GB, free: 30.29 MB / 0.5262 GB Notification: Performance of postOpt inlineArrayEqn (simulation): time 3.988e-06/0.01128, allocations: 2.781 kB / 0.6584 GB, free: 30.29 MB / 0.5262 GB Notification: Performance of postOpt constantLinearSystem (simulation): time 4.128e-06/0.01128, allocations: 0 / 0.6584 GB, free: 30.29 MB / 0.5262 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 4.188e-06/0.01129, allocations: 8.797 kB / 0.6585 GB, free: 30.29 MB / 0.5262 GB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.000514/0.0118, allocations: 0.7937 MB / 0.6592 GB, free: 29.69 MB / 0.5262 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 1.683e-06/0.0118, allocations: 0 / 0.6592 GB, free: 29.69 MB / 0.5262 GB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.000117/0.01192, allocations: 29.92 kB / 0.6593 GB, free: 29.69 MB / 0.5262 GB Notification: Performance of postOpt tearingSystem (simulation): time 2.645e-06/0.01192, allocations: 1.438 kB / 0.6593 GB, free: 29.69 MB / 0.5262 GB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 1.768e-05/0.01194, allocations: 11.59 kB / 0.6593 GB, free: 29.69 MB / 0.5262 GB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 1.724e-06/0.01194, allocations: 1.406 kB / 0.6593 GB, free: 29.69 MB / 0.5262 GB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.883e-06/0.01194, allocations: 1.438 kB / 0.6593 GB, free: 29.69 MB / 0.5262 GB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.0004936/0.01244, allocations: 0.7976 MB / 0.6601 GB, free: 29.11 MB / 0.5262 GB Notification: Performance of postOpt removeConstants (simulation): time 2.461e-05/0.01246, allocations: 31.8 kB / 0.6601 GB, free: 29.09 MB / 0.5262 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 3.026e-05/0.01249, allocations: 12.84 kB / 0.6601 GB, free: 29.08 MB / 0.5262 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 8.099e-05/0.01257, allocations: 10.7 kB / 0.6601 GB, free: 29.08 MB / 0.5262 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 6.355e-05/0.01263, allocations: 34.22 kB / 0.6601 GB, free: 29.07 MB / 0.5262 GB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 4.341e-05/0.01268, allocations: 44.97 kB / 0.6602 GB, free: 29.07 MB / 0.5262 GB Notification: Performance of sorting global known variables: time 0.000106/0.01278, allocations: 218 kB / 0.6604 GB, free: 28.93 MB / 0.5262 GB Notification: Performance of sort global known variables: time 8.1e-08/0.01278, allocations: 0 / 0.6604 GB, free: 28.93 MB / 0.5262 GB Notification: Performance of remove unused functions: time 0.0002375/0.01302, allocations: 78.45 kB / 0.6605 GB, free: 28.92 MB / 0.5262 GB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 1 * Number of states: 5 (dose.TotalCumulativeMass,dose.variableDose.TotalCumulativeMass,central.C,central.AUC,elim.MExc) * Number of discrete variables: 10 ($whenCondition1,$whenCondition2,$whenCondition3,dose.pulse.T_start,dose.pulse.count,central.Cmax,central.Cmin,central.rising,SLC22A2.status,CYP2C19.status) * Number of discrete states: 8 (dose.pulse.count,SLC22A2.status,CYP2C19.status,central.Cmin,$whenCondition3,central.Cmax,$whenCondition2,central.rising) * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (22): * Single equations (assignments): 17 * Array equations: 0 * Algorithm blocks: 3 * Record equations: 0 * When equations: 2 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of Backend phase and start with SimCode phase: time 0.0001858/0.01321, allocations: 157.4 kB / 0.6606 GB, free: 28.82 MB / 0.5262 GB Notification: Performance of simCode: created initialization part: time 0.0003334/0.01354, allocations: 0.6029 MB / 0.6612 GB, free: 28.29 MB / 0.5262 GB Notification: Performance of simCode: created event and clocks part: time 1.442e-06/0.01354, allocations: 0 / 0.6612 GB, free: 28.29 MB / 0.5262 GB Notification: Performance of simCode: created simulation system equations: time 0.0001416/0.01368, allocations: 352.8 kB / 0.6615 GB, free: 27.97 MB / 0.5262 GB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0003002/0.01398, allocations: 72.22 kB / 0.6616 GB, free: 27.95 MB / 0.5262 GB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.001517/0.0155, allocations: 0.9043 MB / 0.6625 GB, free: 27.34 MB / 0.5262 GB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0001142/0.01562, allocations: 171.8 kB / 0.6627 GB, free: 27.25 MB / 0.5262 GB Notification: Performance of simCode: all other stuff during SimCode phase: time 4.85e-05/0.01566, allocations: 24.31 kB / 0.6627 GB, free: 27.25 MB / 0.5262 GB Notification: Performance of SimCode: time 7.41e-07/0.01566, allocations: 0 / 0.6627 GB, free: 27.25 MB / 0.5262 GB Notification: Performance of Templates: time 0.004348/0.02001, allocations: 4.026 MB / 0.6666 GB, free: 26.89 MB / 0.5262 GB " [Timeout remaining time 660] make -j1 -f Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.makefile [Timeout 660] make -j1 -f Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.makefile clang++ -Winvalid-pch -DOMC_BUILD -DUSE_THREAD -fPIC -I"." -I"/var/lib/jenkins/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/bin/../include/omc/cpp/" -I. -I"." -I"" -I"" -DMEASURETIME_PROFILEBLOCKS -DUSE_LOGGER -c -o OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinCalcHelperMain.o OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinCalcHelperMain.cpp In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinInitialize.cpp:180:105: error: use of undeclared identifier 'CYP2C19_P_g_P_ph_P_intermediate_'; did you mean '_SLC22A2_P_g_P_ph_P_intermediate_'? 180 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_CYP2C19_P_g_P_ph_P_poor_, CYP2C19_P_g_P_ph_P_intermediate_, _CYP2C19_P_g_P_ph_P_rapid_, CYP2C19_P_g_P_ph_P_ultra_, _CYP2C19_P_g_P_ph_P_CLscale_, _CYP2C19_P_g_P_ph_P_Fscale_,tmp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | _SLC22A2_P_g_P_ph_P_intermediate_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.h:243:36: note: '_SLC22A2_P_g_P_ph_P_intermediate_' declared here 243 | StatArrayDim1 _SLC22A2_P_g_P_ph_P_intermediate_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinInitialize.cpp:180:167: error: use of undeclared identifier 'CYP2C19_P_g_P_ph_P_ultra_'; did you mean '_CYP2C19_P_g_P_ph_P_poor_'? 180 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_CYP2C19_P_g_P_ph_P_poor_, CYP2C19_P_g_P_ph_P_intermediate_, _CYP2C19_P_g_P_ph_P_rapid_, CYP2C19_P_g_P_ph_P_ultra_, _CYP2C19_P_g_P_ph_P_CLscale_, _CYP2C19_P_g_P_ph_P_Fscale_,tmp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~ | _CYP2C19_P_g_P_ph_P_poor_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.h:238:36: note: '_CYP2C19_P_g_P_ph_P_poor_' declared here 238 | StatArrayDim1 _CYP2C19_P_g_P_ph_P_poor_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinInitialize.cpp:184:105: error: use of undeclared identifier 'CYP2C19_P_g_P_ph_P_intermediate_'; did you mean '_SLC22A2_P_g_P_ph_P_intermediate_'? 184 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_CYP2C19_P_g_P_ph_P_poor_, CYP2C19_P_g_P_ph_P_intermediate_, _CYP2C19_P_g_P_ph_P_rapid_, CYP2C19_P_g_P_ph_P_ultra_, _CYP2C19_P_g_P_ph_P_CLscale_, _CYP2C19_P_g_P_ph_P_Fscale_,tmp3); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | _SLC22A2_P_g_P_ph_P_intermediate_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.h:243:36: note: '_SLC22A2_P_g_P_ph_P_intermediate_' declared here 243 | StatArrayDim1 _SLC22A2_P_g_P_ph_P_intermediate_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinInitialize.cpp:184:167: error: use of undeclared identifier 'CYP2C19_P_g_P_ph_P_ultra_'; did you mean '_CYP2C19_P_g_P_ph_P_poor_'? 184 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_CYP2C19_P_g_P_ph_P_poor_, CYP2C19_P_g_P_ph_P_intermediate_, _CYP2C19_P_g_P_ph_P_rapid_, CYP2C19_P_g_P_ph_P_ultra_, _CYP2C19_P_g_P_ph_P_CLscale_, _CYP2C19_P_g_P_ph_P_Fscale_,tmp3); | ^~~~~~~~~~~~~~~~~~~~~~~~~ | _CYP2C19_P_g_P_ph_P_poor_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.h:238:36: note: '_CYP2C19_P_g_P_ph_P_poor_' declared here 238 | StatArrayDim1 _CYP2C19_P_g_P_ph_P_poor_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinInitialize.cpp:218:75: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_poor_' 218 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp5); | ^~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinInitialize.cpp:218:136: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_rapid_' 218 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp5); | ^~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinInitialize.cpp:218:163: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_ultra_' 218 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp5); | ^~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinInitialize.cpp:222:75: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_poor_' 222 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp7); | ^~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinInitialize.cpp:222:136: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_rapid_' 222 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp7); | ^~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinInitialize.cpp:222:163: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_ultra_' 222 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp7); | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinCalcHelperMain.cpp:33: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.cpp:177:105: error: use of undeclared identifier 'CYP2C19_P_g_P_ph_P_intermediate_'; did you mean '_SLC22A2_P_g_P_ph_P_intermediate_'? 177 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_CYP2C19_P_g_P_ph_P_poor_, CYP2C19_P_g_P_ph_P_intermediate_, _CYP2C19_P_g_P_ph_P_rapid_, CYP2C19_P_g_P_ph_P_ultra_, _CYP2C19_P_g_P_ph_P_CLscale_, _CYP2C19_P_g_P_ph_P_Fscale_,tmp31); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | _SLC22A2_P_g_P_ph_P_intermediate_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.h:243:36: note: '_SLC22A2_P_g_P_ph_P_intermediate_' declared here 243 | StatArrayDim1 _SLC22A2_P_g_P_ph_P_intermediate_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinCalcHelperMain.cpp:33: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.cpp:177:167: error: use of undeclared identifier 'CYP2C19_P_g_P_ph_P_ultra_'; did you mean '_CYP2C19_P_g_P_ph_P_poor_'? 177 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_CYP2C19_P_g_P_ph_P_poor_, CYP2C19_P_g_P_ph_P_intermediate_, _CYP2C19_P_g_P_ph_P_rapid_, CYP2C19_P_g_P_ph_P_ultra_, _CYP2C19_P_g_P_ph_P_CLscale_, _CYP2C19_P_g_P_ph_P_Fscale_,tmp31); | ^~~~~~~~~~~~~~~~~~~~~~~~~ | _CYP2C19_P_g_P_ph_P_poor_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.h:238:36: note: '_CYP2C19_P_g_P_ph_P_poor_' declared here 238 | StatArrayDim1 _CYP2C19_P_g_P_ph_P_poor_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinCalcHelperMain.cpp:33: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.cpp:181:105: error: use of undeclared identifier 'CYP2C19_P_g_P_ph_P_intermediate_'; did you mean '_SLC22A2_P_g_P_ph_P_intermediate_'? 181 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_CYP2C19_P_g_P_ph_P_poor_, CYP2C19_P_g_P_ph_P_intermediate_, _CYP2C19_P_g_P_ph_P_rapid_, CYP2C19_P_g_P_ph_P_ultra_, _CYP2C19_P_g_P_ph_P_CLscale_, _CYP2C19_P_g_P_ph_P_Fscale_,tmp33); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | _SLC22A2_P_g_P_ph_P_intermediate_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.h:243:36: note: '_SLC22A2_P_g_P_ph_P_intermediate_' declared here 243 | StatArrayDim1 _SLC22A2_P_g_P_ph_P_intermediate_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinCalcHelperMain.cpp:33: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.cpp:181:167: error: use of undeclared identifier 'CYP2C19_P_g_P_ph_P_ultra_'; did you mean '_CYP2C19_P_g_P_ph_P_poor_'? 181 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_CYP2C19_P_g_P_ph_P_poor_, CYP2C19_P_g_P_ph_P_intermediate_, _CYP2C19_P_g_P_ph_P_rapid_, CYP2C19_P_g_P_ph_P_ultra_, _CYP2C19_P_g_P_ph_P_CLscale_, _CYP2C19_P_g_P_ph_P_Fscale_,tmp33); | ^~~~~~~~~~~~~~~~~~~~~~~~~ | _CYP2C19_P_g_P_ph_P_poor_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.h:238:36: note: '_CYP2C19_P_g_P_ph_P_poor_' declared here 238 | StatArrayDim1 _CYP2C19_P_g_P_ph_P_poor_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinCalcHelperMain.cpp:33: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.cpp:215:75: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_poor_' 215 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp35); | ^~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.cpp:215:136: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_rapid_' 215 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp35); | ^~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.cpp:215:163: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_ultra_' 215 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp35); | ^~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.cpp:219:75: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_poor_' 219 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp37); | ^~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.cpp:219:136: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_rapid_' 219 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp37); | ^~~~~~~~~~~~~~~~~~~~~~~~~ fatal error: too many errors emitted, stopping now [-ferror-limit=] 20 errors generated. make: *** [: OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinCalcHelperMain.o] Error 1 [Calling os._exit(0), Time elapsed: 5.079707583878189]