Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0009807/0.0009807, allocations: 88.2 kB / 20.19 MB, free: 4.363 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.0009621/0.0009621, allocations: 173 kB / 23.5 MB, free: 1.055 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.004/1.004, allocations: 177.1 MB / 203.8 MB, free: 5.637 MB / 186.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo", uses=false) [Timeout 180] "[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Examples/package.order:0:0-0:0:readonly] Warning: The package.order file does not list all .mo files and directories (containing package.mo) present in its directory. Missing names are: Paracetamol_Experiment Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo): time 1.633/1.633, allocations: 273.5 MB / 0.5213 GB, free: 14.71 MB / 458.7 MB " [Timeout remaining time 178] Using package Pharmacolibrary with version 25.09 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment,tolerance=1e-06,outputFormat="empty",numberOfIntervals=86400,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment") translateModel(Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment,tolerance=1e-06,outputFormat="empty",numberOfIntervals=86400,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment") [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 1.653e-06/1.653e-06, allocations: 0 / 0.6462 GB, free: 38.92 MB / 0.5262 GB Notification: Performance of FrontEnd - Absyn->SCode: time 1.934e-05/2.099e-05, allocations: 2.312 kB / 0.6462 GB, free: 38.91 MB / 0.5262 GB Notification: Performance of NFInst.instantiate(Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment): time 0.007243/0.007264, allocations: 6.707 MB / 0.6528 GB, free: 34.62 MB / 0.5262 GB Notification: Performance of NFInst.instExpressions: time 0.004142/0.01141, allocations: 2.004 MB / 0.6547 GB, free: 33.26 MB / 0.5262 GB Notification: Performance of NFInst.updateImplicitVariability: time 0.0006732/0.01208, allocations: 19.09 kB / 0.6547 GB, free: 33.25 MB / 0.5262 GB Notification: Performance of NFTyping.typeComponents: time 0.0008392/0.01292, allocations: 286 kB / 0.655 GB, free: 33.11 MB / 0.5262 GB Notification: Performance of NFTyping.typeBindings: time 0.001055/0.01397, allocations: 473.7 kB / 0.6555 GB, free: 32.78 MB / 0.5262 GB Notification: Performance of NFTyping.typeClassSections: time 0.001288/0.01526, allocations: 0.5321 MB / 0.656 GB, free: 32.45 MB / 0.5262 GB Notification: Performance of NFFlatten.flatten: time 0.002354/0.01762, allocations: 1.797 MB / 0.6577 GB, free: 31.44 MB / 0.5262 GB Notification: Performance of NFFlatten.resolveConnections: time 0.0006633/0.01828, allocations: 259.7 kB / 0.658 GB, free: 31.29 MB / 0.5262 GB Notification: Performance of NFEvalConstants.evaluate: time 0.001656/0.01994, allocations: 0.9151 MB / 0.6589 GB, free: 30.85 MB / 0.5262 GB Notification: Performance of NFSimplifyModel.simplify: time 0.001042/0.02098, allocations: 0.5308 MB / 0.6594 GB, free: 30.65 MB / 0.5262 GB Notification: Performance of NFPackage.collectConstants: time 0.0003228/0.0213, allocations: 167.9 kB / 0.6596 GB, free: 30.65 MB / 0.5262 GB Notification: Performance of NFFlatten.collectFunctions: time 0.0005971/0.0219, allocations: 319.1 kB / 0.6599 GB, free: 30.59 MB / 0.5262 GB Notification: Performance of NFScalarize.scalarize: time 0.0002961/0.02219, allocations: 371.1 kB / 0.6602 GB, free: 30.36 MB / 0.5262 GB Notification: Performance of NFVerifyModel.verify: time 0.0007544/0.02295, allocations: 0.5186 MB / 0.6607 GB, free: 30.1 MB / 0.5262 GB Notification: Performance of NFConvertDAE.convert: time 0.001868/0.02482, allocations: 1.382 MB / 0.6621 GB, free: 29.36 MB / 0.5262 GB Notification: Performance of FrontEnd - DAE generated: time 3.927e-06/0.02482, allocations: 1.438 kB / 0.6621 GB, free: 29.36 MB / 0.5262 GB Notification: Performance of FrontEnd: time 1.423e-06/0.02482, allocations: 0 / 0.6621 GB, free: 29.36 MB / 0.5262 GB Notification: Performance of Transformations before backend: time 6.3e-05/0.02488, allocations: 2.062 kB / 0.6621 GB, free: 29.36 MB / 0.5262 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 233 * Number of variables: 233 Notification: Performance of Generate backend data structure: time 0.003012/0.0279, allocations: 2.328 MB / 0.6644 GB, free: 27.51 MB / 0.5262 GB Notification: Performance of prepare preOptimizeDAE: time 4.114e-05/0.02794, allocations: 8.438 kB / 0.6644 GB, free: 27.51 MB / 0.5262 GB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0006988/0.02864, allocations: 0.5187 MB / 0.6649 GB, free: 27.3 MB / 0.5262 GB Notification: Performance of preOpt evaluateParameters (simulation): time 0.0006924/0.02933, allocations: 0.6835 MB / 0.6655 GB, free: 26.8 MB / 0.5262 GB Notification: Performance of preOpt simplifyIfEquations (simulation): time 5.658e-05/0.02939, allocations: 74.19 kB / 0.6656 GB, free: 26.77 MB / 0.5262 GB Notification: Performance of preOpt expandDerOperator (simulation): time 0.0001412/0.02953, allocations: 117.7 kB / 0.6657 GB, free: 26.73 MB / 0.5262 GB Notification: Performance of preOpt clockPartitioning (simulation): time 0.001272/0.0308, allocations: 1.309 MB / 0.667 GB, free: 25.89 MB / 0.5262 GB Notification: Performance of preOpt findStateOrder (simulation): time 3.676e-05/0.03084, allocations: 12.14 kB / 0.667 GB, free: 25.88 MB / 0.5262 GB Notification: Performance of preOpt replaceEdgeChange (simulation): time 6.574e-05/0.0309, allocations: 40.69 kB / 0.667 GB, free: 25.86 MB / 0.5262 GB Notification: Performance of preOpt inlineArrayEqn (simulation): time 2.957e-05/0.03093, allocations: 22.22 kB / 0.6671 GB, free: 25.86 MB / 0.5262 GB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0009089/0.03184, allocations: 0.9704 MB / 0.668 GB, free: 25.25 MB / 0.5262 GB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.00251/0.03435, allocations: 2.633 MB / 0.6706 GB, free: 23.55 MB / 0.5262 GB Notification: Performance of preOpt comSubExp (simulation): time 0.001113/0.03546, allocations: 1.171 MB / 0.6717 GB, free: 22.71 MB / 0.5262 GB Notification: Performance of preOpt resolveLoops (simulation): time 0.0005248/0.03599, allocations: 0.7878 MB / 0.6725 GB, free: 22.06 MB / 0.5262 GB Notification: Performance of preOpt evalFunc (simulation): time 5.547e-05/0.03604, allocations: 22.11 kB / 0.6725 GB, free: 22.06 MB / 0.5262 GB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.001054/0.0371, allocations: 1.66 MB / 0.6741 GB, free: 20.75 MB / 0.5262 GB Notification: Performance of pre-optimization done (n=157): time 2.665e-06/0.0371, allocations: 5.562 kB / 0.6741 GB, free: 20.74 MB / 0.5262 GB Notification: Performance of matching and sorting (n=165): time 0.004995/0.04209, allocations: 6.479 MB / 0.6805 GB, free: 16.01 MB / 0.5262 GB Notification: Performance of inlineWhenForInitialization (initialization): time 0.0001798/0.04227, allocations: 1.036 MB / 0.6815 GB, free: 14.79 MB / 0.5262 GB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.00083/0.0431, allocations: 0.923 MB / 0.6824 GB, free: 14.37 MB / 0.5262 GB Notification: Performance of collectPreVariables (initialization): time 7.996e-05/0.04318, allocations: 75.97 kB / 0.6825 GB, free: 14.31 MB / 0.5262 GB Notification: Performance of collectInitialEqns (initialization): time 0.0003098/0.04349, allocations: 0.5729 MB / 0.683 GB, free: 13.85 MB / 0.5262 GB Notification: Performance of collectInitialBindings (initialization): time 0.0002533/0.04375, allocations: 0.5336 MB / 0.6835 GB, free: 13.42 MB / 0.5262 GB Notification: Performance of simplifyInitialFunctions (initialization): time 0.0003003/0.04405, allocations: 284.7 kB / 0.6838 GB, free: 13.29 MB / 0.5262 GB Notification: Performance of setup shared object (initialization): time 3.73e-05/0.04408, allocations: 476.8 kB / 0.6843 GB, free: 12.82 MB / 0.5262 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.000625/0.04471, allocations: 0.9293 MB / 0.6852 GB, free: 12.07 MB / 0.5262 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.0007699/0.04548, allocations: 1.431 MB / 0.6866 GB, free: 10.65 MB / 0.5262 GB Notification: Performance of analyzeInitialSystem (initialization): time 0.001733/0.04721, allocations: 3.014 MB / 0.6895 GB, free: 7.934 MB / 0.5262 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 6.021e-06/0.04722, allocations: 6.219 kB / 0.6895 GB, free: 7.93 MB / 0.5262 GB Notification: Performance of matching and sorting (n=229) (initialization): time 0.00221/0.04943, allocations: 2.756 MB / 0.6922 GB, free: 6.086 MB / 0.5262 GB Notification: Performance of prepare postOptimizeDAE: time 0.0001294/0.04956, allocations: 0.5652 MB / 0.6928 GB, free: 5.441 MB / 0.5262 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.438e-05/0.04957, allocations: 8.656 kB / 0.6928 GB, free: 5.441 MB / 0.5262 GB Notification: Performance of postOpt tearingSystem (initialization): time 2.92e-05/0.0496, allocations: 21.59 kB / 0.6928 GB, free: 5.438 MB / 0.5262 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0007177/0.05032, allocations: 343.8 kB / 0.6931 GB, free: 5.398 MB / 0.5262 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 2.148e-05/0.05034, allocations: 21.16 kB / 0.6931 GB, free: 5.395 MB / 0.5262 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0004/0.05074, allocations: 76.22 kB / 0.6932 GB, free: 5.371 MB / 0.5262 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0002766/0.05102, allocations: 249.6 kB / 0.6934 GB, free: 5.352 MB / 0.5262 GB Warning: Assuming fixed start value for the following 40 variables: patient4.dose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real patient4.dose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real patient4.dose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real patient4.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real patient_citalopram_CYP2C19_2.dose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real patient_citalopram_CYP2C19_2.dose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real patient_citalopram_CYP2C19_2.dose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real patient_citalopram_CYP2C19_2.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real patient2.dose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real patient2.dose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real patient2.dose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real patient2.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real patient_citalopram_normal.dose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real patient_citalopram_normal.dose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real patient_citalopram_normal.dose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real patient_citalopram_normal.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real patient_citalopram_normal.dose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient_citalopram_normal.dose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient_citalopram_normal.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient_citalopram_normal.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient2.dose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient2.dose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient2.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient2.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient_citalopram_CYP2C19_2.dose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient_citalopram_CYP2C19_2.dose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient_citalopram_CYP2C19_2.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient_citalopram_CYP2C19_2.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient4.dose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient4.dose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient4.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient4.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient_citalopram_normal.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean patient_citalopram_normal.dose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean patient2.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean patient2.dose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean patient_citalopram_CYP2C19_2.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean patient_citalopram_CYP2C19_2.dose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean patient4.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean patient4.dose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 41 * Number of states: 0 () * Number of discrete variables: 92 ($PRE.patient_citalopram_normal.dose.absorptionLumen.Cmin,patient_citalopram_normal.dose.absorptionLumen.Cmin,$PRE.patient_citalopram_normal.dose.absorptionLumen.Cmax,patient_citalopram_normal.dose.absorptionLumen.Cmax,$PRE.patient_citalopram_normal.central.Cmin,patient_citalopram_normal.central.Cmin,$PRE.patient_citalopram_normal.central.Cmax,patient_citalopram_normal.central.Cmax,$PRE.patient2.dose.absorptionLumen.Cmin,patient2.dose.absorptionLumen.Cmin,$PRE.patient2.dose.absorptionLumen.Cmax,patient2.dose.absorptionLumen.Cmax,$PRE.patient2.central.Cmin,patient2.central.Cmin,$PRE.patient2.central.Cmax,patient2.central.Cmax,$PRE.patient_citalopram_CYP2C19_2.dose.absorptionLumen.Cmin,patient_citalopram_CYP2C19_2.dose.absorptionLumen.Cmin,$PRE.patient_citalopram_CYP2C19_2.dose.absorptionLumen.Cmax,patient_citalopram_CYP2C19_2.dose.absorptionLumen.Cmax,$PRE.patient_citalopram_CYP2C19_2.central.Cmin,patient_citalopram_CYP2C19_2.central.Cmin,$PRE.patient_citalopram_CYP2C19_2.central.Cmax,patient_citalopram_CYP2C19_2.central.Cmax,$PRE.patient4.dose.absorptionLumen.Cmin,patient4.dose.absorptionLumen.Cmin,$PRE.patient4.dose.absorptionLumen.Cmax,patient4.dose.absorptionLumen.Cmax,$PRE.patient4.central.Cmin,patient4.central.Cmin,$PRE.patient4.central.Cmax,patient4.central.Cmax,$PRE.patient_citalopram_normal.central.rising,$PRE.patient_citalopram_normal.dose.pulse.count,$PRE.patient_citalopram_normal.dose.pulse.T_start,$PRE.patient_citalopram_normal.dose.absorptionLumen.rising,patient_citalopram_normal.CYP2C19.status,patient_citalopram_normal.SLC22A2.status,patient_citalopram_normal.central.rising,patient_citalopram_normal.dose.pulse.count,patient_citalopram_normal.dose.pulse.T_start,patient_citalopram_normal.dose.absorptionLumen.rising,$whenCondition20,$whenCondition19,$whenCondition18,$whenCondition17,$whenCondition16,$PRE.patient2.central.rising,$PRE.patient2.dose.pulse.count,$PRE.patient2.dose.pulse.T_start,$PRE.patient2.dose.absorptionLumen.rising,patient2.CYP2C19.status,patient2.SLC22A2.status,patient2.central.rising,patient2.dose.pulse.count,patient2.dose.pulse.T_start,patient2.dose.absorptionLumen.rising,$whenCondition15,$whenCondition14,$whenCondition13,$whenCondition12,$whenCondition11,$PRE.patient_citalopram_CYP2C19_2.central.rising,$PRE.patient_citalopram_CYP2C19_2.dose.pulse.count,$PRE.patient_citalopram_CYP2C19_2.dose.pulse.T_start,$PRE.patient_citalopram_CYP2C19_2.dose.absorptionLumen.rising,patient_citalopram_CYP2C19_2.CYP2C19.status,patient_citalopram_CYP2C19_2.SLC22A2.status,patient_citalopram_CYP2C19_2.central.rising,patient_citalopram_CYP2C19_2.dose.pulse.count,patient_citalopram_CYP2C19_2.dose.pulse.T_start,patient_citalopram_CYP2C19_2.dose.absorptionLumen.rising,$whenCondition10,$whenCondition9,$whenCondition8,$whenCondition7,$whenCondition6,$PRE.patient4.central.rising,$PRE.patient4.dose.pulse.count,$PRE.patient4.dose.pulse.T_start,$PRE.patient4.dose.absorptionLumen.rising,patient4.CYP2C19.status,patient4.SLC22A2.status,patient4.central.rising,patient4.dose.pulse.count,patient4.dose.pulse.T_start,patient4.dose.absorptionLumen.rising,$whenCondition5,$whenCondition4,$whenCondition3,$whenCondition2,$whenCondition1) * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (209): * Single equations (assignments): 189 * Array equations: 0 * Algorithm blocks: 20 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of prepare postOptimizeDAE: time 0.0005855/0.0516, allocations: 0.9288 MB / 0.6944 GB, free: 4.508 MB / 0.5262 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0004534/0.05206, allocations: 447.4 kB / 0.6948 GB, free: 4.34 MB / 0.5262 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.0001313/0.05219, allocations: 131.7 kB / 0.6949 GB, free: 4.254 MB / 0.5262 GB Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.103e-05/0.0522, allocations: 14.33 kB / 0.6949 GB, free: 4.254 MB / 0.5262 GB Notification: Performance of postOpt constantLinearSystem (simulation): time 1.888e-05/0.05222, allocations: 1.031 kB / 0.6949 GB, free: 4.254 MB / 0.5262 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.3e-05/0.05223, allocations: 8.828 kB / 0.6949 GB, free: 4.254 MB / 0.5262 GB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.00324/0.05547, allocations: 3.972 MB / 0.6988 GB, free: 1.285 MB / 0.5262 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 5.069e-06/0.05547, allocations: 4 kB / 0.6988 GB, free: 1.281 MB / 0.5262 GB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0005778/0.05605, allocations: 227.7 kB / 0.699 GB, free: 1.059 MB / 0.5262 GB Notification: Performance of postOpt tearingSystem (simulation): time 6.181e-06/0.05606, allocations: 8 kB / 0.699 GB, free: 1.051 MB / 0.5262 GB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 7.66e-05/0.05613, allocations: 63.95 kB / 0.6991 GB, free: 0.9883 MB / 0.5262 GB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 4.358e-06/0.05614, allocations: 4 kB / 0.6991 GB, free: 0.9844 MB / 0.5262 GB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.405e-06/0.05614, allocations: 4 kB / 0.6991 GB, free: 0.9805 MB / 0.5262 GB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.003032/0.05917, allocations: 4.019 MB / 0.703 GB, free: 12.64 MB / 0.5418 GB Notification: Performance of postOpt removeConstants (simulation): time 0.0004263/0.0596, allocations: 322.9 kB / 0.7033 GB, free: 12.33 MB / 0.5418 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001613/0.05976, allocations: 75.94 kB / 0.7034 GB, free: 12.25 MB / 0.5418 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0003817/0.06014, allocations: 59.95 kB / 0.7035 GB, free: 12.2 MB / 0.5418 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0002124/0.06036, allocations: 139.7 kB / 0.7036 GB, free: 12.06 MB / 0.5418 GB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.0001908/0.06055, allocations: 243.1 kB / 0.7038 GB, free: 11.82 MB / 0.5418 GB Notification: Performance of sorting global known variables: time 0.0005019/0.06105, allocations: 0.54 MB / 0.7044 GB, free: 11.27 MB / 0.5418 GB Notification: Performance of sort global known variables: time 8e-08/0.06105, allocations: 0 / 0.7044 GB, free: 11.27 MB / 0.5418 GB Notification: Performance of remove unused functions: time 0.0007805/0.06183, allocations: 379.9 kB / 0.7047 GB, free: 10.9 MB / 0.5418 GB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 5 * Number of states: 28 (patient4.dose.TotalCumulativeMass,patient4.dose.absorptionLumen.C,patient4.dose.absorptionLumen.AUC,patient4.dose.variableDose.TotalCumulativeMass,patient4.central.C,patient4.central.AUC,patient4.elim.MExc,patient_citalopram_CYP2C19_2.dose.TotalCumulativeMass,patient_citalopram_CYP2C19_2.dose.absorptionLumen.C,patient_citalopram_CYP2C19_2.dose.absorptionLumen.AUC,patient_citalopram_CYP2C19_2.dose.variableDose.TotalCumulativeMass,patient_citalopram_CYP2C19_2.central.C,patient_citalopram_CYP2C19_2.central.AUC,patient_citalopram_CYP2C19_2.elim.MExc,patient2.dose.TotalCumulativeMass,patient2.dose.absorptionLumen.C,patient2.dose.absorptionLumen.AUC,patient2.dose.variableDose.TotalCumulativeMass,patient2.central.C,patient2.central.AUC,patient2.elim.MExc,patient_citalopram_normal.dose.TotalCumulativeMass,patient_citalopram_normal.dose.absorptionLumen.C,patient_citalopram_normal.dose.absorptionLumen.AUC,patient_citalopram_normal.dose.variableDose.TotalCumulativeMass,patient_citalopram_normal.central.C,patient_citalopram_normal.central.AUC,patient_citalopram_normal.elim.MExc) * Number of discrete variables: 60 ($whenCondition1,$whenCondition2,$whenCondition3,$whenCondition4,$whenCondition5,patient4.dose.absorptionLumen.Cmax,patient4.dose.absorptionLumen.Cmin,patient4.dose.absorptionLumen.rising,patient4.dose.pulse.T_start,patient4.dose.pulse.count,patient4.central.Cmax,patient4.central.Cmin,patient4.central.rising,patient4.SLC22A2.status,patient4.CYP2C19.status,$whenCondition6,$whenCondition7,$whenCondition8,$whenCondition9,$whenCondition10,patient_citalopram_CYP2C19_2.dose.absorptionLumen.Cmax,patient_citalopram_CYP2C19_2.dose.absorptionLumen.Cmin,patient_citalopram_CYP2C19_2.dose.absorptionLumen.rising,patient_citalopram_CYP2C19_2.dose.pulse.T_start,patient_citalopram_CYP2C19_2.dose.pulse.count,patient_citalopram_CYP2C19_2.central.Cmax,patient_citalopram_CYP2C19_2.central.Cmin,patient_citalopram_CYP2C19_2.central.rising,patient_citalopram_CYP2C19_2.SLC22A2.status,patient_citalopram_CYP2C19_2.CYP2C19.status,$whenCondition11,$whenCondition12,$whenCondition13,$whenCondition14,$whenCondition15,patient2.dose.absorptionLumen.Cmax,patient2.dose.absorptionLumen.Cmin,patient2.dose.absorptionLumen.rising,patient2.dose.pulse.T_start,patient2.dose.pulse.count,patient2.central.Cmax,patient2.central.Cmin,patient2.central.rising,patient2.SLC22A2.status,patient2.CYP2C19.status,$whenCondition16,$whenCondition17,$whenCondition18,$whenCondition19,$whenCondition20,patient_citalopram_normal.dose.absorptionLumen.Cmax,patient_citalopram_normal.dose.absorptionLumen.Cmin,patient_citalopram_normal.dose.absorptionLumen.rising,patient_citalopram_normal.dose.pulse.T_start,patient_citalopram_normal.dose.pulse.count,patient_citalopram_normal.central.Cmax,patient_citalopram_normal.central.Cmin,patient_citalopram_normal.central.rising,patient_citalopram_normal.SLC22A2.status,patient_citalopram_normal.CYP2C19.status) * Number of discrete states: 52 (patient_citalopram_normal.dose.pulse.count,patient_citalopram_normal.SLC22A2.status,patient_citalopram_normal.CYP2C19.status,patient_citalopram_normal.dose.absorptionLumen.Cmin,$whenCondition20,patient_citalopram_normal.dose.absorptionLumen.Cmax,$whenCondition19,patient_citalopram_normal.dose.absorptionLumen.rising,patient_citalopram_normal.central.Cmin,$whenCondition18,patient_citalopram_normal.central.Cmax,$whenCondition17,patient_citalopram_normal.central.rising,patient2.dose.pulse.count,patient2.SLC22A2.status,patient2.CYP2C19.status,patient2.dose.absorptionLumen.Cmin,$whenCondition15,patient2.dose.absorptionLumen.Cmax,$whenCondition14,patient2.dose.absorptionLumen.rising,patient2.central.Cmin,$whenCondition13,patient2.central.Cmax,$whenCondition12,patient2.central.rising,patient_citalopram_CYP2C19_2.dose.pulse.count,patient_citalopram_CYP2C19_2.SLC22A2.status,patient_citalopram_CYP2C19_2.CYP2C19.status,patient_citalopram_CYP2C19_2.dose.absorptionLumen.Cmin,$whenCondition10,patient_citalopram_CYP2C19_2.dose.absorptionLumen.Cmax,$whenCondition9,patient_citalopram_CYP2C19_2.dose.absorptionLumen.rising,patient_citalopram_CYP2C19_2.central.Cmin,$whenCondition8,patient_citalopram_CYP2C19_2.central.Cmax,$whenCondition7,patient_citalopram_CYP2C19_2.central.rising,patient4.dose.pulse.count,patient4.SLC22A2.status,patient4.CYP2C19.status,patient4.dose.absorptionLumen.Cmin,$whenCondition5,patient4.dose.absorptionLumen.Cmax,$whenCondition4,patient4.dose.absorptionLumen.rising,patient4.central.Cmin,$whenCondition3,patient4.central.Cmax,$whenCondition2,patient4.central.rising) * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (133): * Single equations (assignments): 109 * Array equations: 0 * Algorithm blocks: 16 * Record equations: 0 * When equations: 8 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of Backend phase and start with SimCode phase: time 0.0003582/0.06219, allocations: 287.1 kB / 0.705 GB, free: 10.62 MB / 0.5418 GB Notification: Performance of simCode: created initialization part: time 0.002193/0.06438, allocations: 3.159 MB / 0.7081 GB, free: 7.004 MB / 0.5418 GB Notification: Performance of simCode: created event and clocks part: time 2.585e-06/0.06438, allocations: 0 / 0.7081 GB, free: 7.004 MB / 0.5418 GB Notification: Performance of simCode: created simulation system equations: time 0.001112/0.06549, allocations: 1.89 MB / 0.7099 GB, free: 4.812 MB / 0.5418 GB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.001253/0.06675, allocations: 402.2 kB / 0.7103 GB, free: 4.457 MB / 0.5418 GB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.00444/0.07119, allocations: 3.991 MB / 0.7142 GB, free: 416 kB / 0.5418 GB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0004901/0.07168, allocations: 0.6408 MB / 0.7148 GB, free: 15.73 MB / 0.5574 GB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0002055/0.07188, allocations: 92.5 kB / 0.7149 GB, free: 15.64 MB / 0.5574 GB Notification: Performance of SimCode: time 8.42e-07/0.07188, allocations: 0 / 0.7149 GB, free: 15.64 MB / 0.5574 GB Notification: Performance of Templates: time 0.01664/0.08853, allocations: 20.23 MB / 0.7347 GB, free: 12.02 MB / 0.573 GB " [Timeout remaining time 660] make -j1 -f Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment.makefile [Timeout 660] make -j1 -f Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment.makefile clang++ -Winvalid-pch -DOMC_BUILD -DUSE_THREAD -fPIC -I"." -I"/var/lib/jenkins/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/bin/../include/omc/cpp/" -I. -I"." -I"" -I"" -DMEASURETIME_PROFILEBLOCKS -DUSE_LOGGER -c -o OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentCalcHelperMain.o OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentCalcHelperMain.cpp In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:308:116: error: use of undeclared identifier 'patient4_P_CYP2C19_P_g_P_ph_P_intermediate_'; did you mean '_patient4_P_SLC22A2_P_g_P_ph_P_intermediate_'? 308 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_patient4_P_CYP2C19_P_g_P_ph_P_poor_, patient4_P_CYP2C19_P_g_P_ph_P_intermediate_, _patient4_P_CYP2C19_P_g_P_ph_P_rapid_, patient4_P_CYP2C19_P_g_P_ph_P_ultra_, _patient4_P_CYP2C19_P_g_P_ph_P_CLscale_, _patient4_P_CYP2C19_P_g_P_ph_P_Fscale_,tmp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | _patient4_P_SLC22A2_P_g_P_ph_P_intermediate_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment.h:531:36: note: '_patient4_P_SLC22A2_P_g_P_ph_P_intermediate_' declared here 531 | StatArrayDim1 _patient4_P_SLC22A2_P_g_P_ph_P_intermediate_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:308:200: error: use of undeclared identifier 'patient4_P_CYP2C19_P_g_P_ph_P_ultra_'; did you mean '_patient4_P_CYP2C19_P_g_P_ph_P_poor_'? 308 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_patient4_P_CYP2C19_P_g_P_ph_P_poor_, patient4_P_CYP2C19_P_g_P_ph_P_intermediate_, _patient4_P_CYP2C19_P_g_P_ph_P_rapid_, patient4_P_CYP2C19_P_g_P_ph_P_ultra_, _patient4_P_CYP2C19_P_g_P_ph_P_CLscale_, _patient4_P_CYP2C19_P_g_P_ph_P_Fscale_,tmp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | _patient4_P_CYP2C19_P_g_P_ph_P_poor_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment.h:526:36: note: '_patient4_P_CYP2C19_P_g_P_ph_P_poor_' declared here 526 | StatArrayDim1 _patient4_P_CYP2C19_P_g_P_ph_P_poor_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:312:116: error: use of undeclared identifier 'patient4_P_CYP2C19_P_g_P_ph_P_intermediate_'; did you mean '_patient4_P_SLC22A2_P_g_P_ph_P_intermediate_'? 312 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_patient4_P_CYP2C19_P_g_P_ph_P_poor_, patient4_P_CYP2C19_P_g_P_ph_P_intermediate_, _patient4_P_CYP2C19_P_g_P_ph_P_rapid_, patient4_P_CYP2C19_P_g_P_ph_P_ultra_, _patient4_P_CYP2C19_P_g_P_ph_P_CLscale_, _patient4_P_CYP2C19_P_g_P_ph_P_Fscale_,tmp3); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | _patient4_P_SLC22A2_P_g_P_ph_P_intermediate_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment.h:531:36: note: '_patient4_P_SLC22A2_P_g_P_ph_P_intermediate_' declared here 531 | StatArrayDim1 _patient4_P_SLC22A2_P_g_P_ph_P_intermediate_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:312:200: error: use of undeclared identifier 'patient4_P_CYP2C19_P_g_P_ph_P_ultra_'; did you mean '_patient4_P_CYP2C19_P_g_P_ph_P_poor_'? 312 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_patient4_P_CYP2C19_P_g_P_ph_P_poor_, patient4_P_CYP2C19_P_g_P_ph_P_intermediate_, _patient4_P_CYP2C19_P_g_P_ph_P_rapid_, patient4_P_CYP2C19_P_g_P_ph_P_ultra_, _patient4_P_CYP2C19_P_g_P_ph_P_CLscale_, _patient4_P_CYP2C19_P_g_P_ph_P_Fscale_,tmp3); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | _patient4_P_CYP2C19_P_g_P_ph_P_poor_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment.h:526:36: note: '_patient4_P_CYP2C19_P_g_P_ph_P_poor_' declared here 526 | StatArrayDim1 _patient4_P_CYP2C19_P_g_P_ph_P_poor_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:346:75: error: use of undeclared identifier 'patient4_P_SLC22A2_P_g_P_ph_P_poor_' 346 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(patient4_P_SLC22A2_P_g_P_ph_P_poor_, _patient4_P_SLC22A2_P_g_P_ph_P_intermediate_, patient4_P_SLC22A2_P_g_P_ph_P_rapid_, patient4_P_SLC22A2_P_g_P_ph_P_ultra_, _patient4_P_SLC22A2_P_g_P_ph_P_CLscale_, _patient4_P_SLC22A2_P_g_P_ph_P_Fscale_,tmp5); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:346:158: error: use of undeclared identifier 'patient4_P_SLC22A2_P_g_P_ph_P_rapid_' 346 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(patient4_P_SLC22A2_P_g_P_ph_P_poor_, _patient4_P_SLC22A2_P_g_P_ph_P_intermediate_, patient4_P_SLC22A2_P_g_P_ph_P_rapid_, patient4_P_SLC22A2_P_g_P_ph_P_ultra_, _patient4_P_SLC22A2_P_g_P_ph_P_CLscale_, _patient4_P_SLC22A2_P_g_P_ph_P_Fscale_,tmp5); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:346:196: error: use of undeclared identifier 'patient4_P_SLC22A2_P_g_P_ph_P_ultra_' 346 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(patient4_P_SLC22A2_P_g_P_ph_P_poor_, _patient4_P_SLC22A2_P_g_P_ph_P_intermediate_, patient4_P_SLC22A2_P_g_P_ph_P_rapid_, patient4_P_SLC22A2_P_g_P_ph_P_ultra_, _patient4_P_SLC22A2_P_g_P_ph_P_CLscale_, _patient4_P_SLC22A2_P_g_P_ph_P_Fscale_,tmp5); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:350:75: error: use of undeclared identifier 'patient4_P_SLC22A2_P_g_P_ph_P_poor_' 350 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(patient4_P_SLC22A2_P_g_P_ph_P_poor_, _patient4_P_SLC22A2_P_g_P_ph_P_intermediate_, patient4_P_SLC22A2_P_g_P_ph_P_rapid_, patient4_P_SLC22A2_P_g_P_ph_P_ultra_, _patient4_P_SLC22A2_P_g_P_ph_P_CLscale_, _patient4_P_SLC22A2_P_g_P_ph_P_Fscale_,tmp7); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:350:158: error: use of undeclared identifier 'patient4_P_SLC22A2_P_g_P_ph_P_rapid_' 350 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(patient4_P_SLC22A2_P_g_P_ph_P_poor_, _patient4_P_SLC22A2_P_g_P_ph_P_intermediate_, patient4_P_SLC22A2_P_g_P_ph_P_rapid_, patient4_P_SLC22A2_P_g_P_ph_P_ultra_, _patient4_P_SLC22A2_P_g_P_ph_P_CLscale_, _patient4_P_SLC22A2_P_g_P_ph_P_Fscale_,tmp7); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:350:196: error: use of undeclared identifier 'patient4_P_SLC22A2_P_g_P_ph_P_ultra_' 350 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(patient4_P_SLC22A2_P_g_P_ph_P_poor_, _patient4_P_SLC22A2_P_g_P_ph_P_intermediate_, patient4_P_SLC22A2_P_g_P_ph_P_rapid_, patient4_P_SLC22A2_P_g_P_ph_P_ultra_, _patient4_P_SLC22A2_P_g_P_ph_P_CLscale_, _patient4_P_SLC22A2_P_g_P_ph_P_Fscale_,tmp7); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:751:136: error: use of undeclared identifier 'patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_intermediate_'; did you mean '_patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_intermediate_'? 751 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_poor_, patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_intermediate_, _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_rapid_, patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_ultra_, _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_CLscale_, _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_Fscale_,tmp11); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_intermediate_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment.h:540:36: note: '_patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_intermediate_' declared here 540 | StatArrayDim1 _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_intermediate_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:751:260: error: use of undeclared identifier 'patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_ultra_'; did you mean '_patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_poor_'? 751 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_poor_, patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_intermediate_, _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_rapid_, patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_ultra_, _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_CLscale_, _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_Fscale_,tmp11); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_poor_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment.h:535:36: note: '_patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_poor_' declared here 535 | StatArrayDim1 _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_poor_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:755:136: error: use of undeclared identifier 'patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_intermediate_'; did you mean '_patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_intermediate_'? 755 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_poor_, patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_intermediate_, _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_rapid_, patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_ultra_, _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_CLscale_, _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_Fscale_,tmp13); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_intermediate_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment.h:540:36: note: '_patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_intermediate_' declared here 540 | StatArrayDim1 _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_intermediate_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:755:260: error: use of undeclared identifier 'patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_ultra_'; did you mean '_patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_poor_'? 755 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_poor_, patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_intermediate_, _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_rapid_, patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_ultra_, _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_CLscale_, _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_Fscale_,tmp13); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_poor_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment.h:535:36: note: '_patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_poor_' declared here 535 | StatArrayDim1 _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_poor_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:789:75: error: use of undeclared identifier 'patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_poor_' 789 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_poor_, _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_intermediate_, patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_rapid_, patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_ultra_, _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_CLscale_, _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_Fscale_,tmp15); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:789:198: error: use of undeclared identifier 'patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_rapid_' 789 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_poor_, _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_intermediate_, patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_rapid_, patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_ultra_, _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_CLscale_, _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_Fscale_,tmp15); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:789:256: error: use of undeclared identifier 'patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_ultra_' 789 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_poor_, _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_intermediate_, patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_rapid_, patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_ultra_, _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_CLscale_, _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_Fscale_,tmp15); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:793:75: error: use of undeclared identifier 'patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_poor_' 793 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_poor_, _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_intermediate_, patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_rapid_, patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_ultra_, _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_CLscale_, _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_Fscale_,tmp17); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:793:198: error: use of undeclared identifier 'patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_rapid_' 793 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_poor_, _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_intermediate_, patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_rapid_, patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_ultra_, _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_CLscale_, _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_Fscale_,tmp17); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ fatal error: too many errors emitted, stopping now [-ferror-limit=] 20 errors generated. make: *** [: OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentCalcHelperMain.o] Error 1 [Calling os._exit(0), Time elapsed: 5.117636902956292]