Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001182/0.001182, allocations: 92.2 kB / 20.19 MB, free: 4.363 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001336/0.001336, allocations: 177 kB / 23.49 MB, free: 1.059 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9646/0.9646, allocations: 177.1 MB / 203.8 MB, free: 5.656 MB / 186.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo", uses=false) [Timeout 180] "[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Examples/package.order:0:0-0:0:readonly] Warning: The package.order file does not list all .mo files and directories (containing package.mo) present in its directory. Missing names are: Paracetamol_Experiment Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo): time 1.522/1.522, allocations: 273.5 MB / 0.5212 GB, free: 14.89 MB / 458.7 MB " [Timeout remaining time 178] Using package Pharmacolibrary with version 25.09 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Pharmacolibrary.Examples.Paracetamol_Experiment,tolerance=1e-06,outputFormat="empty",numberOfIntervals=8640,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment") translateModel(Pharmacolibrary.Examples.Paracetamol_Experiment,tolerance=1e-06,outputFormat="empty",numberOfIntervals=8640,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment") [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 1.393e-06/1.393e-06, allocations: 0 / 0.6462 GB, free: 39.15 MB / 0.5262 GB Notification: Performance of FrontEnd - Absyn->SCode: time 1.327e-05/1.466e-05, allocations: 2.312 kB / 0.6462 GB, free: 39.15 MB / 0.5262 GB Notification: Performance of NFInst.instantiate(Pharmacolibrary.Examples.Paracetamol_Experiment): time 0.004504/0.004518, allocations: 6.981 MB / 0.653 GB, free: 34.55 MB / 0.5262 GB Notification: Performance of NFInst.instExpressions: time 0.001177/0.005695, allocations: 1.293 MB / 0.6543 GB, free: 33.65 MB / 0.5262 GB Notification: Performance of NFInst.updateImplicitVariability: time 0.0001699/0.005865, allocations: 11.5 kB / 0.6543 GB, free: 33.65 MB / 0.5262 GB Notification: Performance of NFTyping.typeComponents: time 0.0001858/0.006051, allocations: 112.3 kB / 0.6544 GB, free: 33.58 MB / 0.5262 GB Notification: Performance of NFTyping.typeBindings: time 0.0003347/0.006385, allocations: 340.4 kB / 0.6547 GB, free: 33.34 MB / 0.5262 GB Notification: Performance of NFTyping.typeClassSections: time 0.0003466/0.006732, allocations: 289 kB / 0.655 GB, free: 33.14 MB / 0.5262 GB Notification: Performance of NFFlatten.flatten: time 0.0006121/0.007344, allocations: 1.222 MB / 0.6562 GB, free: 32.45 MB / 0.5262 GB Notification: Performance of NFFlatten.resolveConnections: time 0.0002148/0.007559, allocations: 174.6 kB / 0.6563 GB, free: 32.34 MB / 0.5262 GB Notification: Performance of NFEvalConstants.evaluate: time 0.000431/0.00799, allocations: 0.6215 MB / 0.6569 GB, free: 32.05 MB / 0.5262 GB Notification: Performance of NFSimplifyModel.simplify: time 0.0003774/0.008367, allocations: 358.1 kB / 0.6573 GB, free: 31.93 MB / 0.5262 GB Notification: Performance of NFPackage.collectConstants: time 0.0001683/0.008536, allocations: 110.8 kB / 0.6574 GB, free: 31.93 MB / 0.5262 GB Notification: Performance of NFFlatten.collectFunctions: time 0.0001798/0.008715, allocations: 111.2 kB / 0.6575 GB, free: 31.93 MB / 0.5262 GB Notification: Performance of NFScalarize.scalarize: time 9.698e-05/0.008812, allocations: 199.6 kB / 0.6577 GB, free: 31.78 MB / 0.5262 GB Notification: Performance of NFVerifyModel.verify: time 0.0003077/0.00912, allocations: 361.6 kB / 0.658 GB, free: 31.61 MB / 0.5262 GB Notification: Performance of NFConvertDAE.convert: time 0.0004705/0.009591, allocations: 0.7206 MB / 0.6587 GB, free: 31.22 MB / 0.5262 GB Notification: Performance of FrontEnd - DAE generated: time 2.074e-06/0.009593, allocations: 0 / 0.6587 GB, free: 31.22 MB / 0.5262 GB Notification: Performance of FrontEnd: time 6.81e-07/0.009593, allocations: 1.125 kB / 0.6587 GB, free: 31.22 MB / 0.5262 GB Notification: Performance of Transformations before backend: time 9.007e-06/0.009602, allocations: 0 / 0.6587 GB, free: 31.22 MB / 0.5262 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 144 * Number of variables: 144 Notification: Performance of Generate backend data structure: time 0.00115/0.01075, allocations: 1.402 MB / 0.6601 GB, free: 30.11 MB / 0.5262 GB Notification: Performance of prepare preOptimizeDAE: time 3.403e-05/0.01079, allocations: 12.91 kB / 0.6601 GB, free: 30.11 MB / 0.5262 GB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0001557/0.01094, allocations: 139.1 kB / 0.6602 GB, free: 30.05 MB / 0.5262 GB Notification: Performance of preOpt evaluateParameters (simulation): time 0.0003916/0.01133, allocations: 452.1 kB / 0.6607 GB, free: 29.71 MB / 0.5262 GB Notification: Performance of preOpt simplifyIfEquations (simulation): time 2.753e-05/0.01136, allocations: 43.91 kB / 0.6607 GB, free: 29.69 MB / 0.5262 GB Notification: Performance of preOpt expandDerOperator (simulation): time 7.993e-05/0.01144, allocations: 68.77 kB / 0.6608 GB, free: 29.66 MB / 0.5262 GB Notification: Performance of preOpt clockPartitioning (simulation): time 0.000685/0.01213, allocations: 0.695 MB / 0.6615 GB, free: 29.23 MB / 0.5262 GB Notification: Performance of preOpt findStateOrder (simulation): time 2.325e-05/0.01215, allocations: 7.859 kB / 0.6615 GB, free: 29.23 MB / 0.5262 GB Notification: Performance of preOpt replaceEdgeChange (simulation): time 3.581e-05/0.01219, allocations: 26.48 kB / 0.6615 GB, free: 29.21 MB / 0.5262 GB Notification: Performance of preOpt inlineArrayEqn (simulation): time 1.381e-05/0.0122, allocations: 18 kB / 0.6615 GB, free: 29.21 MB / 0.5262 GB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0004562/0.01266, allocations: 472.4 kB / 0.662 GB, free: 28.97 MB / 0.5262 GB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.001368/0.01402, allocations: 1.929 MB / 0.6638 GB, free: 27.54 MB / 0.5262 GB Notification: Performance of preOpt comSubExp (simulation): time 0.0006465/0.01467, allocations: 0.5714 MB / 0.6644 GB, free: 27.18 MB / 0.5262 GB Notification: Performance of preOpt resolveLoops (simulation): time 0.0002599/0.01493, allocations: 345.6 kB / 0.6647 GB, free: 26.92 MB / 0.5262 GB Notification: Performance of preOpt evalFunc (simulation): time 3.633e-05/0.01497, allocations: 14 kB / 0.6647 GB, free: 26.92 MB / 0.5262 GB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0005587/0.01552, allocations: 0.9673 MB / 0.6657 GB, free: 26.16 MB / 0.5262 GB Notification: Performance of pre-optimization done (n=99): time 1.813e-06/0.01553, allocations: 1.312 kB / 0.6657 GB, free: 26.16 MB / 0.5262 GB Notification: Performance of matching and sorting (n=105): time 0.002502/0.01803, allocations: 2.958 MB / 0.6686 GB, free: 24.1 MB / 0.5262 GB Notification: Performance of inlineWhenForInitialization (initialization): time 0.0001054/0.01813, allocations: 0.5988 MB / 0.6692 GB, free: 23.4 MB / 0.5262 GB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0003592/0.01849, allocations: 0.513 MB / 0.6697 GB, free: 23.13 MB / 0.5262 GB Notification: Performance of collectPreVariables (initialization): time 4.772e-05/0.01854, allocations: 61.86 kB / 0.6697 GB, free: 23.08 MB / 0.5262 GB Notification: Performance of collectInitialEqns (initialization): time 0.0001257/0.01867, allocations: 354.8 kB / 0.6701 GB, free: 22.78 MB / 0.5262 GB Notification: Performance of collectInitialBindings (initialization): time 0.0001546/0.01882, allocations: 343.3 kB / 0.6704 GB, free: 22.51 MB / 0.5262 GB Notification: Performance of simplifyInitialFunctions (initialization): time 0.0001797/0.019, allocations: 193.4 kB / 0.6706 GB, free: 22.42 MB / 0.5262 GB Notification: Performance of setup shared object (initialization): time 9.399e-05/0.0191, allocations: 0.5646 MB / 0.6711 GB, free: 21.89 MB / 0.5262 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.0003172/0.01941, allocations: 460.2 kB / 0.6716 GB, free: 21.55 MB / 0.5262 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.0004177/0.01983, allocations: 0.8618 MB / 0.6724 GB, free: 20.65 MB / 0.5262 GB Notification: Performance of analyzeInitialSystem (initialization): time 0.0009279/0.02076, allocations: 1.551 MB / 0.6739 GB, free: 19.22 MB / 0.5262 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 6.853e-06/0.02076, allocations: 5.25 kB / 0.6739 GB, free: 19.22 MB / 0.5262 GB Notification: Performance of matching and sorting (n=159) (initialization): time 0.001057/0.02182, allocations: 1.371 MB / 0.6753 GB, free: 18.35 MB / 0.5262 GB Notification: Performance of prepare postOptimizeDAE: time 6.361e-05/0.02189, allocations: 264.9 kB / 0.6755 GB, free: 18.06 MB / 0.5262 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.023e-05/0.0219, allocations: 8.344 kB / 0.6755 GB, free: 18.06 MB / 0.5262 GB Notification: Performance of postOpt tearingSystem (initialization): time 2.151e-05/0.02192, allocations: 14.81 kB / 0.6755 GB, free: 18.06 MB / 0.5262 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0004725/0.02239, allocations: 250.5 kB / 0.6758 GB, free: 18.04 MB / 0.5262 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 1.508e-05/0.0224, allocations: 21.58 kB / 0.6758 GB, free: 18.03 MB / 0.5262 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0002786/0.02268, allocations: 59.2 kB / 0.6759 GB, free: 18.01 MB / 0.5262 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 4.896e-05/0.02273, allocations: 46.31 kB / 0.6759 GB, free: 18 MB / 0.5262 GB Warning: Assuming fixed start value for the following 30 variables: rapid_met.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real rapid_met.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real rapid_met.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real rapid_met.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real poor_met.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real poor_met.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real poor_met.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real poor_met.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real normal.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real normal.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real normal.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real normal.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real normal.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real poor_met.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real poor_met.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real poor_met.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real poor_met.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real rapid_met.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real rapid_met.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real rapid_met.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real rapid_met.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean normal.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean poor_met.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean poor_met.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean rapid_met.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean rapid_met.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 36 * Number of states: 0 () * Number of discrete variables: 63 ($PRE.normal.central.Cmin,normal.central.Cmin,$PRE.normal.central.Cmax,normal.central.Cmax,$PRE.normal.periodicDose.absorptionLumen.Cmin,normal.periodicDose.absorptionLumen.Cmin,$PRE.normal.periodicDose.absorptionLumen.Cmax,normal.periodicDose.absorptionLumen.Cmax,$PRE.poor_met.central.Cmin,poor_met.central.Cmin,$PRE.poor_met.central.Cmax,poor_met.central.Cmax,$PRE.poor_met.periodicDose.absorptionLumen.Cmin,poor_met.periodicDose.absorptionLumen.Cmin,$PRE.poor_met.periodicDose.absorptionLumen.Cmax,poor_met.periodicDose.absorptionLumen.Cmax,$PRE.rapid_met.central.Cmin,rapid_met.central.Cmin,$PRE.rapid_met.central.Cmax,rapid_met.central.Cmax,$PRE.rapid_met.periodicDose.absorptionLumen.Cmin,rapid_met.periodicDose.absorptionLumen.Cmin,$PRE.rapid_met.periodicDose.absorptionLumen.Cmax,rapid_met.periodicDose.absorptionLumen.Cmax,$PRE.normal.periodicDose.pulse.count,$PRE.normal.periodicDose.pulse.T_start,$PRE.normal.periodicDose.absorptionLumen.rising,$PRE.normal.central.rising,normal.periodicDose.pulse.count,normal.periodicDose.pulse.T_start,normal.periodicDose.absorptionLumen.rising,normal.central.rising,$whenCondition15,$whenCondition14,$whenCondition13,$whenCondition12,$whenCondition11,$PRE.poor_met.periodicDose.pulse.count,$PRE.poor_met.periodicDose.pulse.T_start,$PRE.poor_met.periodicDose.absorptionLumen.rising,$PRE.poor_met.central.rising,poor_met.periodicDose.pulse.count,poor_met.periodicDose.pulse.T_start,poor_met.periodicDose.absorptionLumen.rising,poor_met.central.rising,$whenCondition10,$whenCondition9,$whenCondition8,$whenCondition7,$whenCondition6,$PRE.rapid_met.periodicDose.pulse.count,$PRE.rapid_met.periodicDose.pulse.T_start,$PRE.rapid_met.periodicDose.absorptionLumen.rising,$PRE.rapid_met.central.rising,rapid_met.periodicDose.pulse.count,rapid_met.periodicDose.pulse.T_start,rapid_met.periodicDose.absorptionLumen.rising,rapid_met.central.rising,$whenCondition5,$whenCondition4,$whenCondition3,$whenCondition2,$whenCondition1) * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (150): * Single equations (assignments): 141 * Array equations: 0 * Algorithm blocks: 9 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of prepare postOptimizeDAE: time 0.0003415/0.02307, allocations: 0.5661 MB / 0.6765 GB, free: 17.53 MB / 0.5262 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0001083/0.02318, allocations: 129 kB / 0.6766 GB, free: 17.47 MB / 0.5262 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 7.431e-05/0.02326, allocations: 87.34 kB / 0.6767 GB, free: 17.41 MB / 0.5262 GB Notification: Performance of postOpt inlineArrayEqn (simulation): time 5.621e-06/0.02326, allocations: 9.906 kB / 0.6767 GB, free: 17.41 MB / 0.5262 GB Notification: Performance of postOpt constantLinearSystem (simulation): time 8.466e-06/0.02327, allocations: 3.938 kB / 0.6767 GB, free: 17.4 MB / 0.5262 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 7.875e-06/0.02328, allocations: 4.75 kB / 0.6767 GB, free: 17.4 MB / 0.5262 GB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.001603/0.02488, allocations: 2.143 MB / 0.6788 GB, free: 16.02 MB / 0.5262 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 3.126e-06/0.02489, allocations: 5.375 kB / 0.6788 GB, free: 16.02 MB / 0.5262 GB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0004221/0.02531, allocations: 166.8 kB / 0.6789 GB, free: 16 MB / 0.5262 GB Notification: Performance of postOpt tearingSystem (simulation): time 4.608e-06/0.02531, allocations: 4.281 kB / 0.6789 GB, free: 16 MB / 0.5262 GB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 4.694e-05/0.02536, allocations: 35.72 kB / 0.679 GB, free: 15.98 MB / 0.5262 GB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 3.747e-06/0.02536, allocations: 4.156 kB / 0.679 GB, free: 15.98 MB / 0.5262 GB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.345e-06/0.02536, allocations: 6.312 kB / 0.679 GB, free: 15.98 MB / 0.5262 GB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.001277/0.02664, allocations: 1.924 MB / 0.6809 GB, free: 14.71 MB / 0.5262 GB Notification: Performance of postOpt removeConstants (simulation): time 0.0002181/0.02686, allocations: 173.1 kB / 0.681 GB, free: 14.6 MB / 0.5262 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 9.564e-05/0.02696, allocations: 48.7 kB / 0.6811 GB, free: 14.57 MB / 0.5262 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0002569/0.02721, allocations: 43.39 kB / 0.6811 GB, free: 14.56 MB / 0.5262 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.000146/0.02736, allocations: 90.73 kB / 0.6812 GB, free: 14.54 MB / 0.5262 GB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 4.462e-05/0.0274, allocations: 37.64 kB / 0.6812 GB, free: 14.53 MB / 0.5262 GB Notification: Performance of sorting global known variables: time 0.0002449/0.02765, allocations: 347.1 kB / 0.6816 GB, free: 14.36 MB / 0.5262 GB Notification: Performance of sort global known variables: time 6e-08/0.02765, allocations: 0 / 0.6816 GB, free: 14.36 MB / 0.5262 GB Notification: Performance of remove unused functions: time 0.0004921/0.02814, allocations: 247.5 kB / 0.6818 GB, free: 14.33 MB / 0.5262 GB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 3 * Number of states: 21 (rapid_met.central.C,rapid_met.central.AUC,rapid_met.elim.MExc,rapid_met.periodicDose.TotalCumulativeMass,rapid_met.periodicDose.absorptionLumen.C,rapid_met.periodicDose.absorptionLumen.AUC,rapid_met.periodicDose.variableDose.TotalCumulativeMass,poor_met.central.C,poor_met.central.AUC,poor_met.elim.MExc,poor_met.periodicDose.TotalCumulativeMass,poor_met.periodicDose.absorptionLumen.C,poor_met.periodicDose.absorptionLumen.AUC,poor_met.periodicDose.variableDose.TotalCumulativeMass,normal.central.C,normal.central.AUC,normal.elim.MExc,normal.periodicDose.TotalCumulativeMass,normal.periodicDose.absorptionLumen.C,normal.periodicDose.absorptionLumen.AUC,normal.periodicDose.variableDose.TotalCumulativeMass) * Number of discrete variables: 39 ($whenCondition1,$whenCondition2,$whenCondition3,$whenCondition4,$whenCondition5,rapid_met.central.Cmax,rapid_met.central.Cmin,rapid_met.central.rising,rapid_met.periodicDose.absorptionLumen.Cmax,rapid_met.periodicDose.absorptionLumen.Cmin,rapid_met.periodicDose.absorptionLumen.rising,rapid_met.periodicDose.pulse.T_start,rapid_met.periodicDose.pulse.count,$whenCondition6,$whenCondition7,$whenCondition8,$whenCondition9,$whenCondition10,poor_met.central.Cmax,poor_met.central.Cmin,poor_met.central.rising,poor_met.periodicDose.absorptionLumen.Cmax,poor_met.periodicDose.absorptionLumen.Cmin,poor_met.periodicDose.absorptionLumen.rising,poor_met.periodicDose.pulse.T_start,poor_met.periodicDose.pulse.count,$whenCondition11,$whenCondition12,$whenCondition13,$whenCondition14,$whenCondition15,normal.central.Cmax,normal.central.Cmin,normal.central.rising,normal.periodicDose.absorptionLumen.Cmax,normal.periodicDose.absorptionLumen.Cmin,normal.periodicDose.absorptionLumen.rising,normal.periodicDose.pulse.T_start,normal.periodicDose.pulse.count) * Number of discrete states: 33 (normal.periodicDose.pulse.count,normal.central.Cmin,$whenCondition15,normal.central.Cmax,$whenCondition14,normal.central.rising,normal.periodicDose.absorptionLumen.Cmin,$whenCondition13,normal.periodicDose.absorptionLumen.Cmax,$whenCondition12,normal.periodicDose.absorptionLumen.rising,poor_met.periodicDose.pulse.count,poor_met.central.Cmin,$whenCondition10,poor_met.central.Cmax,$whenCondition9,poor_met.central.rising,poor_met.periodicDose.absorptionLumen.Cmin,$whenCondition8,poor_met.periodicDose.absorptionLumen.Cmax,$whenCondition7,poor_met.periodicDose.absorptionLumen.rising,rapid_met.periodicDose.pulse.count,rapid_met.central.Cmin,$whenCondition5,rapid_met.central.Cmax,$whenCondition4,rapid_met.central.rising,rapid_met.periodicDose.absorptionLumen.Cmin,$whenCondition3,rapid_met.periodicDose.absorptionLumen.Cmax,$whenCondition2,rapid_met.periodicDose.absorptionLumen.rising) * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (87): * Single equations (assignments): 75 * Array equations: 0 * Algorithm blocks: 6 * Record equations: 0 * When equations: 6 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of Backend phase and start with SimCode phase: time 0.0001364/0.02828, allocations: 187.7 kB / 0.682 GB, free: 14.21 MB / 0.5262 GB Notification: Performance of simCode: created initialization part: time 0.0009434/0.02922, allocations: 1.497 MB / 0.6834 GB, free: 13.02 MB / 0.5262 GB Notification: Performance of simCode: created event and clocks part: time 1.933e-06/0.02922, allocations: 4.125 kB / 0.6834 GB, free: 13.02 MB / 0.5262 GB Notification: Performance of simCode: created simulation system equations: time 0.0004455/0.02967, allocations: 0.8183 MB / 0.6842 GB, free: 12.36 MB / 0.5262 GB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0008024/0.03047, allocations: 276.3 kB / 0.6845 GB, free: 12.29 MB / 0.5262 GB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.00287/0.03334, allocations: 2.329 MB / 0.6868 GB, free: 10.77 MB / 0.5262 GB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0002608/0.0336, allocations: 360.5 kB / 0.6871 GB, free: 10.65 MB / 0.5262 GB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0001721/0.03377, allocations: 77.62 kB / 0.6872 GB, free: 10.64 MB / 0.5262 GB Notification: Performance of SimCode: time 7.61e-07/0.03377, allocations: 4 kB / 0.6872 GB, free: 10.63 MB / 0.5262 GB Notification: Performance of Templates: time 0.01026/0.04403, allocations: 12.24 MB / 0.6992 GB, free: 2.617 MB / 0.5262 GB " [Timeout remaining time 660] make -j1 -f Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.makefile [Timeout 660] (rm -f Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.pipe ; mkfifo Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.pipe ; head -c 1048576 < Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.pipe >> ../files/Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.sim & ./Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment > Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.pipe 2>&1) [Timeout 240] [Calling sys.exit(0), Time elapsed: 6.409168952144682]