Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false) [Timeout 90] Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.001764/0.001764, allocations: 103.4 kB / 18.19 MB, free: 3.879 MB / 14.72 MB [Timeout remaining time 90] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false) [Timeout 90] Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.002121/0.002121, allocations: 188.4 kB / 21.34 MB, free: 0.7383 MB / 14.72 MB [Timeout remaining time 90] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo", uses=false) [Timeout 90] Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo): time 1.49/1.49, allocations: 225.6 MB / 249.9 MB, free: 13.44 MB / 206.1 MB [Timeout remaining time 88] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo", uses=false) [Timeout 90] Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo): time 0.07103/0.07103, allocations: 12.41 MB / 317.4 MB, free: 13.47 MB / 254.1 MB [Timeout remaining time 90] Using package BioChem with version 1.1.2 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo) Using package Modelica with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo) Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo) Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo) Running command: translateModel(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel,tolerance=1e-06,outputFormat="empty",numberOfIntervals=-1,variableFilter="",fileNamePrefix="BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel") translateModel(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel,tolerance=1e-06,outputFormat="empty",numberOfIntervals=-1,variableFilter="",fileNamePrefix="BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel") [Timeout 660] Warning: Ignoring unknown experiment annotation option: Algorithm = "dassl" Notification: Performance of FrontEnd - loaded program: time 0.001955/0.001955, allocations: 60.38 kB / 442.3 MB, free: 6.527 MB / 302.1 MB Notification: Performance of FrontEnd - Absyn->SCode: time 0.1044/0.1064, allocations: 54.91 MB / 497.2 MB, free: 15.53 MB / 366.1 MB Notification: Performance of NFInst.instantiate(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel): time 0.01289/0.1193, allocations: 8.767 MB / 0.4941 GB, free: 6.734 MB / 366.1 MB Notification: Performance of NFInst.instExpressions: time 0.005046/0.1243, allocations: 2.379 MB / 0.4965 GB, free: 4.348 MB / 366.1 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.001175/0.1255, allocations: 112 kB / 0.4966 GB, free: 4.238 MB / 366.1 MB Notification: Performance of NFTyping.typeComponents: time 0.0009048/0.1264, allocations: 377 kB / 0.4969 GB, free: 3.867 MB / 366.1 MB Notification: Performance of NFTyping.typeBindings: time 0.001236/0.1276, allocations: 0.5301 MB / 0.4975 GB, free: 3.332 MB / 366.1 MB Notification: Performance of NFTyping.typeClassSections: time 0.00109/0.1287, allocations: 0.5775 MB / 0.498 GB, free: 2.754 MB / 366.1 MB Notification: Performance of NFFlatten.flatten: time 0.002415/0.1312, allocations: 2.328 MB / 0.5003 GB, free: 428 kB / 366.1 MB Notification: Performance of NFFlatten.resolveConnections: time 0.001294/0.1324, allocations: 0.8697 MB / 0.5011 GB, free: 15.5 MB / 382.1 MB Notification: Performance of NFEvalConstants.evaluate: time 0.001104/0.1335, allocations: 0.9463 MB / 0.5021 GB, free: 14.55 MB / 382.1 MB Notification: Performance of NFSimplifyModel.simplify: time 0.001222/0.1348, allocations: 1.085 MB / 0.5031 GB, free: 13.46 MB / 382.1 MB Notification: Performance of NFPackage.collectConstants: time 0.0003827/0.1352, allocations: 316 kB / 0.5034 GB, free: 13.15 MB / 382.1 MB Notification: Performance of NFFlatten.collectFunctions: time 0.0003991/0.1356, allocations: 316 kB / 0.5037 GB, free: 12.84 MB / 382.1 MB Notification: Performance of NFScalarize.scalarize: time 0.000508/0.1361, allocations: 0.5804 MB / 0.5043 GB, free: 12.26 MB / 382.1 MB Notification: Performance of NFVerifyModel.verify: time 0.001307/0.1374, allocations: 1.26 MB / 0.5055 GB, free: 10.99 MB / 382.1 MB Notification: Performance of NFConvertDAE.convert: time 0.003777/0.1411, allocations: 3.437 MB / 0.5089 GB, free: 7.543 MB / 382.1 MB Notification: Performance of FrontEnd - DAE generated: time 3.376e-06/0.1411, allocations: 0 / 0.5089 GB, free: 7.543 MB / 382.1 MB Notification: Performance of FrontEnd: time 9.52e-07/0.1411, allocations: 0 / 0.5089 GB, free: 7.543 MB / 382.1 MB Notification: Performance of Transformations before backend: time 4.924e-05/0.1412, allocations: 0 / 0.5089 GB, free: 7.543 MB / 382.1 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 687 * Number of variables: 687 Notification: Performance of Generate backend data structure: time 0.003965/0.1452, allocations: 2.393 MB / 0.5112 GB, free: 5.09 MB / 382.1 MB Notification: Performance of prepare preOptimizeDAE: time 3.946e-05/0.1452, allocations: 8.031 kB / 0.5112 GB, free: 5.082 MB / 382.1 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0003426/0.1455, allocations: 255.4 kB / 0.5115 GB, free: 4.832 MB / 382.1 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.0004171/0.146, allocations: 417.4 kB / 0.5119 GB, free: 4.387 MB / 382.1 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.000294/0.1463, allocations: 253.4 kB / 0.5121 GB, free: 4.125 MB / 382.1 MB Notification: Performance of preOpt expandDerOperator (simulation): time 0.0003555/0.1466, allocations: 284.3 kB / 0.5124 GB, free: 3.848 MB / 382.1 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.004404/0.151, allocations: 2.397 MB / 0.5147 GB, free: 1.363 MB / 382.1 MB Notification: Performance of preOpt findStateOrder (simulation): time 8.076e-05/0.1511, allocations: 7.953 kB / 0.5147 GB, free: 1.355 MB / 382.1 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001977/0.1513, allocations: 111.9 kB / 0.5148 GB, free: 1.246 MB / 382.1 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 6.555e-05/0.1514, allocations: 68 kB / 0.5149 GB, free: 1.18 MB / 382.1 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.1988/0.3502, allocations: 1.67 MB / 0.5165 GB, free: 28.2 MB / 382.1 MB Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts. Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.01225/0.3624, allocations: 8.389 MB / 0.5247 GB, free: 25.04 MB / 382.1 MB Notification: Performance of preOpt comSubExp (simulation): time 0.002033/0.3645, allocations: 1.546 MB / 0.5262 GB, free: 24.05 MB / 382.1 MB Notification: Performance of preOpt resolveLoops (simulation): time 0.0008532/0.3653, allocations: 0.5128 MB / 0.5267 GB, free: 23.82 MB / 382.1 MB Notification: Performance of preOpt evalFunc (simulation): time 7.263e-05/0.3654, allocations: 15.72 kB / 0.5268 GB, free: 23.82 MB / 382.1 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.349e-05/0.3654, allocations: 51.48 kB / 0.5268 GB, free: 23.77 MB / 382.1 MB Notification: Performance of pre-optimization done (n=139): time 3.777e-06/0.3654, allocations: 1.125 kB / 0.5268 GB, free: 23.77 MB / 382.1 MB Notification: Performance of matching and sorting (n=171): time 0.02451/0.3899, allocations: 9.224 MB / 0.5358 GB, free: 20.39 MB / 382.1 MB Notification: Performance of inlineWhenForInitialization (initialization): time 6.849e-05/0.39, allocations: 181.6 kB / 0.536 GB, free: 20.19 MB / 382.1 MB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0005018/0.3905, allocations: 495 kB / 0.5365 GB, free: 19.95 MB / 382.1 MB Notification: Performance of collectPreVariables (initialization): time 7.599e-05/0.3906, allocations: 58.33 kB / 0.5365 GB, free: 19.9 MB / 382.1 MB Notification: Performance of collectInitialEqns (initialization): time 0.0003403/0.3909, allocations: 0.9847 MB / 0.5375 GB, free: 19.03 MB / 382.1 MB Notification: Performance of collectInitialBindings (initialization): time 0.0003073/0.3912, allocations: 0.6572 MB / 0.5381 GB, free: 18.45 MB / 382.1 MB Notification: Performance of simplifyInitialFunctions (initialization): time 0.0004142/0.3916, allocations: 352 kB / 0.5384 GB, free: 18.24 MB / 382.1 MB Notification: Performance of setup shared object (initialization): time 4.778e-05/0.3917, allocations: 318.3 kB / 0.5388 GB, free: 17.93 MB / 382.1 MB Notification: Performance of preBalanceInitialSystem (initialization): time 0.001101/0.3928, allocations: 0.6673 MB / 0.5394 GB, free: 17.57 MB / 382.1 MB Notification: Performance of partitionIndependentBlocks (initialization): time 0.001212/0.394, allocations: 1.187 MB / 0.5406 GB, free: 16.48 MB / 382.1 MB Notification: Performance of analyzeInitialSystem (initialization): time 0.01503/0.409, allocations: 4.727 MB / 0.5452 GB, free: 13.63 MB / 382.1 MB Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.5e-05/0.409, allocations: 7.844 kB / 0.5452 GB, free: 13.63 MB / 382.1 MB Notification: Performance of matching and sorting (n=291) (initialization): time 0.002833/0.4119, allocations: 2.118 MB / 0.5473 GB, free: 12.57 MB / 382.1 MB Notification: Performance of prepare postOptimizeDAE: time 2.706e-05/0.4119, allocations: 22.77 kB / 0.5473 GB, free: 12.57 MB / 382.1 MB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.911e-05/0.4119, allocations: 16.69 kB / 0.5473 GB, free: 12.57 MB / 382.1 MB Notification: Performance of postOpt tearingSystem (initialization): time 3.495e-05/0.412, allocations: 31.72 kB / 0.5473 GB, free: 12.57 MB / 382.1 MB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.002341/0.4143, allocations: 0.6461 MB / 0.548 GB, free: 12.41 MB / 382.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 3.034e-05/0.4143, allocations: 47.36 kB / 0.548 GB, free: 12.4 MB / 382.1 MB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0008888/0.4152, allocations: 75.61 kB / 0.5481 GB, free: 12.36 MB / 382.1 MB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 9.84e-05/0.4153, allocations: 87.22 kB / 0.5482 GB, free: 12.34 MB / 382.1 MB Warning: Assuming fixed start value for the following 41 variables: V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real adiposeTissue1.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real GlucoseRenalExcretion.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real GlucoseRenalExcretion.E.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real UtilizationMuscleTissue.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real UtilizationMuscleTissue.U_idm.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real GastroIntestinalTract.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real GastroIntestinalTract.GlucoseIntake.c:VARIABLE(min = 0.0 start = 78000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real TissueGlucose.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real PlasmaGlucose.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real PlasmaInsulin.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real LiverInsulin.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real EndogenousGlucoseProduction.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real EndogenousGlucoseProduction.I_po.c:VARIABLE(min = 0.0 start = 3.6 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real BetaCell.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real BetaCell.Y.c:VARIABLE(min = 0.0 start = 0.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real adiposeTissue1.adipocyte1.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real adiposeTissue1.adipocyte1.IR.c:VARIABLE(min = 0.0 start = 2.34e12 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real adiposeTissue1.adipocyte1.IRS1.c:VARIABLE(min = 0.0 start = 1.61e10 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real adiposeTissue1.adipocyte1.PKB.c:VARIABLE(min = 0.0 start = 1.68e7 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real adiposeTissue1.adipocyte1.GLUT4_CYTOSOL.c:VARIABLE(min = 0.0 start = 5.8e8 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real adiposeTissue1.adipocyte1.IR_insulin.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real adiposeTissue1.adipocyte1.GLUT4_MEMBRANE.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real adiposeTissue1.adipocyte1.GlucoseUtilization.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real adiposeTissue1.adipocyte1.PKB_P.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real adiposeTissue1.adipocyte1.IRS1_P.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real BetaCell.G_p.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real EndogenousGlucoseProduction.End.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real EndogenousGlucoseProduction.I_d.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real EndogenousGlucoseProduction.I_1.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real LiverInsulin.Deg.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real LiverInsulin.I_l.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real UtilizationMuscleTissue.UtilizationReaction.X:VARIABLE(min = 0.0 unit = "mol/l" fixed = true ) type: Real PlasmaInsulin.Deg.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real PlasmaInsulin.I_p.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real PlasmaGlucose.U_ii.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real TissueGlucose.G_t.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real GastroIntestinalTract.End.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real GastroIntestinalTract.Q_sto1.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real GastroIntestinalTract.Q_gut.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real GastroIntestinalTract.Q_sto2.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 86 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (291): * Single equations (assignments): 291 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of prepare postOptimizeDAE: time 0.0009196/0.4162, allocations: 0.6019 MB / 0.5487 GB, free: 11.92 MB / 382.1 MB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0002149/0.4164, allocations: 104.4 kB / 0.5488 GB, free: 11.86 MB / 382.1 MB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.002166/0.4186, allocations: 1.439 MB / 0.5502 GB, free: 11.04 MB / 382.1 MB Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.426e-05/0.4186, allocations: 17.75 kB / 0.5503 GB, free: 11.04 MB / 382.1 MB Notification: Performance of postOpt constantLinearSystem (simulation): time 9.407e-06/0.4186, allocations: 3.938 kB / 0.5503 GB, free: 11.04 MB / 382.1 MB Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.663e-05/0.4187, allocations: 11.5 kB / 0.5503 GB, free: 11.03 MB / 382.1 MB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.005346/0.424, allocations: 3.572 MB / 0.5538 GB, free: 8.016 MB / 382.1 MB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 6.041e-06/0.424, allocations: 0 / 0.5538 GB, free: 8.016 MB / 382.1 MB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.002355/0.4264, allocations: 481.7 kB / 0.5542 GB, free: 7.547 MB / 382.1 MB Notification: Performance of postOpt tearingSystem (simulation): time 1.056e-05/0.4264, allocations: 8 kB / 0.5542 GB, free: 7.539 MB / 382.1 MB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.00011/0.4265, allocations: 55.97 kB / 0.5543 GB, free: 7.484 MB / 382.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 7.484e-06/0.4265, allocations: 11.94 kB / 0.5543 GB, free: 7.473 MB / 382.1 MB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.664e-06/0.4265, allocations: 0 / 0.5543 GB, free: 7.473 MB / 382.1 MB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.002928/0.4294, allocations: 2.519 MB / 0.5568 GB, free: 4.93 MB / 382.1 MB Notification: Performance of postOpt removeConstants (simulation): time 0.0001601/0.4296, allocations: 164.4 kB / 0.5569 GB, free: 4.75 MB / 382.1 MB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001429/0.4297, allocations: 48 kB / 0.557 GB, free: 4.703 MB / 382.1 MB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0007622/0.4305, allocations: 39.98 kB / 0.557 GB, free: 4.664 MB / 382.1 MB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0001635/0.4306, allocations: 117 kB / 0.5571 GB, free: 4.551 MB / 382.1 MB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 7.423e-05/0.4307, allocations: 47.97 kB / 0.5572 GB, free: 4.504 MB / 382.1 MB Notification: Performance of sorting global known variables: time 0.0002587/0.431, allocations: 306.9 kB / 0.5575 GB, free: 4.203 MB / 382.1 MB Notification: Performance of sort global known variables: time 8e-08/0.431, allocations: 0 / 0.5575 GB, free: 4.203 MB / 382.1 MB Notification: Performance of remove unused functions: time 0.001424/0.4324, allocations: 425 kB / 0.5579 GB, free: 3.789 MB / 382.1 MB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 7 * Number of states: 41 (GastroIntestinalTract.V,GastroIntestinalTract.Q_sto2.n,GastroIntestinalTract.Q_gut.n,GastroIntestinalTract.Q_sto1.n,GastroIntestinalTract.GlucoseIntake.c,GastroIntestinalTract.End.n,TissueGlucose.V,TissueGlucose.G_t.n,PlasmaGlucose.V,PlasmaGlucose.U_ii.n,PlasmaInsulin.V,PlasmaInsulin.I_p.n,PlasmaInsulin.Deg.n,UtilizationMuscleTissue.UtilizationReaction.X,LiverInsulin.V,LiverInsulin.I_l.n,LiverInsulin.Deg.n,EndogenousGlucoseProduction.V,EndogenousGlucoseProduction.I_1.n,EndogenousGlucoseProduction.I_d.n,EndogenousGlucoseProduction.End.n,EndogenousGlucoseProduction.I_po.c,BetaCell.V,BetaCell.G_p.n,BetaCell.Y.c,adiposeTissue1.adipocyte1.V,adiposeTissue1.adipocyte1.IR.c,adiposeTissue1.adipocyte1.IRS1.c,adiposeTissue1.adipocyte1.IRS1_P.n,adiposeTissue1.adipocyte1.PKB.c,adiposeTissue1.adipocyte1.PKB_P.n,adiposeTissue1.adipocyte1.GlucoseUtilization.n,adiposeTissue1.adipocyte1.GLUT4_MEMBRANE.n,adiposeTissue1.adipocyte1.GLUT4_CYTOSOL.c,adiposeTissue1.adipocyte1.IR_insulin.n,V,adiposeTissue1.V,UtilizationMuscleTissue.V,UtilizationMuscleTissue.U_idm.n,GlucoseRenalExcretion.V,GlucoseRenalExcretion.E.n) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (173): * Single equations (assignments): 173 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of Backend phase and start with SimCode phase: time 0.0001782/0.4326, allocations: 161.4 kB / 0.558 GB, free: 3.629 MB / 382.1 MB Notification: Performance of simCode: created initialization part: time 0.002259/0.4348, allocations: 1.551 MB / 0.5595 GB, free: 2.082 MB / 382.1 MB Notification: Performance of simCode: created event and clocks part: time 2.174e-06/0.4348, allocations: 0 / 0.5595 GB, free: 2.082 MB / 382.1 MB Notification: Performance of simCode: created simulation system equations: time 0.0009728/0.4358, allocations: 0.7298 MB / 0.5602 GB, free: 1.352 MB / 382.1 MB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.001148/0.437, allocations: 230.3 kB / 0.5605 GB, free: 1.141 MB / 382.1 MB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.008278/0.4452, allocations: 4.971 MB / 0.5653 GB, free: 12.12 MB / 398.1 MB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.001233/0.4465, allocations: 1.37 MB / 0.5666 GB, free: 10.72 MB / 398.1 MB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0005916/0.4471, allocations: 127.4 kB / 0.5668 GB, free: 10.59 MB / 398.1 MB Notification: Performance of SimCode: time 9.41e-07/0.4471, allocations: 3.938 kB / 0.5668 GB, free: 10.59 MB / 398.1 MB Notification: Performance of Templates: time 0.03115/0.4782, allocations: 19.18 MB / 0.5855 GB, free: 7.379 MB / 414.1 MB [Timeout remaining time 660] make -j1 -f BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.makefile [Timeout 660] (rm -f BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe ; mkfifo BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe ; head -c 1048576 < BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe >> ../files/BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.sim & ./BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel -abortSlowSimulation -alarm=480 -lv LOG_STATS > BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe 2>&1) [Timeout 480]