Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.000907/0.000907, allocations: 88.2 kB / 20.19 MB, free: 4.363 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.0009468/0.0009468, allocations: 173 kB / 23.49 MB, free: 1.059 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9224/0.9224, allocations: 177.1 MB / 203.8 MB, free: 5.633 MB / 186.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo", uses=false) [Timeout 180] "[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Examples/package.order:0:0-0:0:readonly] Warning: The package.order file does not list all .mo files and directories (containing package.mo) present in its directory. Missing names are: Paracetamol_Experiment Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo): time 1.598/1.598, allocations: 273.5 MB / 0.5213 GB, free: 14.77 MB / 458.7 MB " [Timeout remaining time 178] Using package Pharmacolibrary with version 25.09 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Pharmacolibrary.Examples.Paracetamol_Experiment,tolerance=1e-06,outputFormat="empty",numberOfIntervals=8640,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment") translateModel(Pharmacolibrary.Examples.Paracetamol_Experiment,tolerance=1e-06,outputFormat="empty",numberOfIntervals=8640,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment") [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 3.397e-06/3.397e-06, allocations: 0 / 0.647 GB, free: 38.56 MB / 0.5262 GB Notification: Performance of FrontEnd - Absyn->SCode: time 2.695e-05/3.035e-05, allocations: 6.219 kB / 0.647 GB, free: 38.55 MB / 0.5262 GB Notification: Performance of NFInst.instantiate(Pharmacolibrary.Examples.Paracetamol_Experiment): time 0.004966/0.004996, allocations: 6.974 MB / 0.6538 GB, free: 33.95 MB / 0.5262 GB Notification: Performance of NFInst.instExpressions: time 0.001969/0.006965, allocations: 1.297 MB / 0.655 GB, free: 33.05 MB / 0.5262 GB Notification: Performance of NFInst.updateImplicitVariability: time 0.0003654/0.007331, allocations: 8.75 kB / 0.6551 GB, free: 33.05 MB / 0.5262 GB Notification: Performance of NFTyping.typeComponents: time 0.0002365/0.007567, allocations: 114.2 kB / 0.6552 GB, free: 32.98 MB / 0.5262 GB Notification: Performance of NFTyping.typeBindings: time 0.0005113/0.008078, allocations: 340.2 kB / 0.6555 GB, free: 32.74 MB / 0.5262 GB Notification: Performance of NFTyping.typeClassSections: time 0.0005175/0.008596, allocations: 289.1 kB / 0.6558 GB, free: 32.55 MB / 0.5262 GB Notification: Performance of NFFlatten.flatten: time 0.0008642/0.00946, allocations: 1.214 MB / 0.6569 GB, free: 31.86 MB / 0.5262 GB Notification: Performance of NFFlatten.resolveConnections: time 0.0002764/0.009736, allocations: 176.5 kB / 0.6571 GB, free: 31.75 MB / 0.5262 GB Notification: Performance of NFEvalConstants.evaluate: time 0.000629/0.01037, allocations: 0.6207 MB / 0.6577 GB, free: 31.46 MB / 0.5262 GB Notification: Performance of NFSimplifyModel.simplify: time 0.0005235/0.01089, allocations: 360.2 kB / 0.6581 GB, free: 31.33 MB / 0.5262 GB Notification: Performance of NFPackage.collectConstants: time 0.0001639/0.01105, allocations: 111.4 kB / 0.6582 GB, free: 31.33 MB / 0.5262 GB Notification: Performance of NFFlatten.collectFunctions: time 0.0001226/0.01118, allocations: 110.9 kB / 0.6583 GB, free: 31.33 MB / 0.5262 GB Notification: Performance of NFScalarize.scalarize: time 8.305e-05/0.01126, allocations: 195 kB / 0.6585 GB, free: 31.19 MB / 0.5262 GB Notification: Performance of NFVerifyModel.verify: time 0.0002597/0.01152, allocations: 361.7 kB / 0.6588 GB, free: 31.02 MB / 0.5262 GB Notification: Performance of NFConvertDAE.convert: time 0.0005909/0.01211, allocations: 0.7214 MB / 0.6595 GB, free: 30.62 MB / 0.5262 GB Notification: Performance of FrontEnd - DAE generated: time 4.899e-06/0.01211, allocations: 1.375 kB / 0.6595 GB, free: 30.62 MB / 0.5262 GB Notification: Performance of FrontEnd: time 1.483e-06/0.01212, allocations: 3.234 kB / 0.6595 GB, free: 30.62 MB / 0.5262 GB Notification: Performance of Transformations before backend: time 9.969e-06/0.01213, allocations: 0 / 0.6595 GB, free: 30.62 MB / 0.5262 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 144 * Number of variables: 144 Notification: Performance of Generate backend data structure: time 0.001317/0.01344, allocations: 1.41 MB / 0.6609 GB, free: 29.51 MB / 0.5262 GB Notification: Performance of prepare preOptimizeDAE: time 4.086e-05/0.01348, allocations: 9.688 kB / 0.6609 GB, free: 29.51 MB / 0.5262 GB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0001711/0.01365, allocations: 139 kB / 0.661 GB, free: 29.45 MB / 0.5262 GB Notification: Performance of preOpt evaluateParameters (simulation): time 0.0004383/0.01409, allocations: 437.9 kB / 0.6615 GB, free: 29.12 MB / 0.5262 GB Notification: Performance of preOpt simplifyIfEquations (simulation): time 3.293e-05/0.01413, allocations: 48.61 kB / 0.6615 GB, free: 29.1 MB / 0.5262 GB Notification: Performance of preOpt expandDerOperator (simulation): time 8.298e-05/0.01421, allocations: 72.73 kB / 0.6616 GB, free: 29.07 MB / 0.5262 GB Notification: Performance of preOpt clockPartitioning (simulation): time 0.0007155/0.01492, allocations: 0.6903 MB / 0.6622 GB, free: 28.64 MB / 0.5262 GB Notification: Performance of preOpt findStateOrder (simulation): time 2.818e-05/0.01495, allocations: 12.11 kB / 0.6623 GB, free: 28.64 MB / 0.5262 GB Notification: Performance of preOpt replaceEdgeChange (simulation): time 3.948e-05/0.01499, allocations: 23 kB / 0.6623 GB, free: 28.62 MB / 0.5262 GB Notification: Performance of preOpt inlineArrayEqn (simulation): time 1.544e-05/0.01501, allocations: 17.94 kB / 0.6623 GB, free: 28.62 MB / 0.5262 GB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0004712/0.01548, allocations: 476.6 kB / 0.6627 GB, free: 28.38 MB / 0.5262 GB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.001549/0.01703, allocations: 1.921 MB / 0.6646 GB, free: 26.96 MB / 0.5262 GB Notification: Performance of preOpt comSubExp (simulation): time 0.0006822/0.01771, allocations: 0.579 MB / 0.6652 GB, free: 26.58 MB / 0.5262 GB Notification: Performance of preOpt resolveLoops (simulation): time 0.0002545/0.01796, allocations: 339.3 kB / 0.6655 GB, free: 26.33 MB / 0.5262 GB Notification: Performance of preOpt evalFunc (simulation): time 4.004e-05/0.018, allocations: 17.03 kB / 0.6655 GB, free: 26.33 MB / 0.5262 GB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0005922/0.0186, allocations: 0.9642 MB / 0.6665 GB, free: 25.57 MB / 0.5262 GB Notification: Performance of pre-optimization done (n=99): time 2.314e-06/0.0186, allocations: 0 / 0.6665 GB, free: 25.57 MB / 0.5262 GB Notification: Performance of matching and sorting (n=105): time 0.002767/0.02136, allocations: 2.974 MB / 0.6694 GB, free: 23.5 MB / 0.5262 GB Notification: Performance of inlineWhenForInitialization (initialization): time 0.0001134/0.02148, allocations: 0.5961 MB / 0.67 GB, free: 22.8 MB / 0.5262 GB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0003859/0.02186, allocations: 0.5166 MB / 0.6705 GB, free: 22.53 MB / 0.5262 GB Notification: Performance of collectPreVariables (initialization): time 5.378e-05/0.02192, allocations: 61.81 kB / 0.6705 GB, free: 22.48 MB / 0.5262 GB Notification: Performance of collectInitialEqns (initialization): time 0.0001342/0.02205, allocations: 341.8 kB / 0.6708 GB, free: 22.19 MB / 0.5262 GB Notification: Performance of collectInitialBindings (initialization): time 0.0001505/0.0222, allocations: 353.3 kB / 0.6712 GB, free: 21.91 MB / 0.5262 GB Notification: Performance of simplifyInitialFunctions (initialization): time 0.0001802/0.02238, allocations: 194.4 kB / 0.6714 GB, free: 21.82 MB / 0.5262 GB Notification: Performance of setup shared object (initialization): time 9.934e-05/0.02248, allocations: 0.5662 MB / 0.6719 GB, free: 21.29 MB / 0.5262 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.0003351/0.02282, allocations: 453.2 kB / 0.6724 GB, free: 20.95 MB / 0.5262 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.0004056/0.02322, allocations: 0.8639 MB / 0.6732 GB, free: 20.05 MB / 0.5262 GB Notification: Performance of analyzeInitialSystem (initialization): time 0.0009513/0.02417, allocations: 1.551 MB / 0.6747 GB, free: 18.62 MB / 0.5262 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 7.644e-06/0.02418, allocations: 1.719 kB / 0.6747 GB, free: 18.62 MB / 0.5262 GB Notification: Performance of matching and sorting (n=159) (initialization): time 0.001132/0.02531, allocations: 1.371 MB / 0.6761 GB, free: 17.75 MB / 0.5262 GB Notification: Performance of prepare postOptimizeDAE: time 6.319e-05/0.02538, allocations: 265.1 kB / 0.6763 GB, free: 17.46 MB / 0.5262 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.22e-05/0.02539, allocations: 8.781 kB / 0.6763 GB, free: 17.46 MB / 0.5262 GB Notification: Performance of postOpt tearingSystem (initialization): time 2.405e-05/0.02541, allocations: 15.34 kB / 0.6763 GB, free: 17.46 MB / 0.5262 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0005426/0.02596, allocations: 255 kB / 0.6766 GB, free: 17.43 MB / 0.5262 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 1.857e-05/0.02597, allocations: 20.06 kB / 0.6766 GB, free: 17.43 MB / 0.5262 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.000418/0.02639, allocations: 52.36 kB / 0.6766 GB, free: 17.41 MB / 0.5262 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 5.258e-05/0.02644, allocations: 53.03 kB / 0.6767 GB, free: 17.4 MB / 0.5262 GB Warning: Assuming fixed start value for the following 30 variables: rapid_met.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real rapid_met.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real rapid_met.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real rapid_met.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real poor_met.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real poor_met.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real poor_met.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real poor_met.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real normal.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real normal.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real normal.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real normal.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real normal.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real poor_met.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real poor_met.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real poor_met.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real poor_met.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real rapid_met.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real rapid_met.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real rapid_met.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real rapid_met.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean normal.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean poor_met.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean poor_met.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean rapid_met.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean rapid_met.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 36 * Number of states: 0 () * Number of discrete variables: 63 ($PRE.normal.central.Cmin,normal.central.Cmin,$PRE.normal.central.Cmax,normal.central.Cmax,$PRE.normal.periodicDose.absorptionLumen.Cmin,normal.periodicDose.absorptionLumen.Cmin,$PRE.normal.periodicDose.absorptionLumen.Cmax,normal.periodicDose.absorptionLumen.Cmax,$PRE.poor_met.central.Cmin,poor_met.central.Cmin,$PRE.poor_met.central.Cmax,poor_met.central.Cmax,$PRE.poor_met.periodicDose.absorptionLumen.Cmin,poor_met.periodicDose.absorptionLumen.Cmin,$PRE.poor_met.periodicDose.absorptionLumen.Cmax,poor_met.periodicDose.absorptionLumen.Cmax,$PRE.rapid_met.central.Cmin,rapid_met.central.Cmin,$PRE.rapid_met.central.Cmax,rapid_met.central.Cmax,$PRE.rapid_met.periodicDose.absorptionLumen.Cmin,rapid_met.periodicDose.absorptionLumen.Cmin,$PRE.rapid_met.periodicDose.absorptionLumen.Cmax,rapid_met.periodicDose.absorptionLumen.Cmax,$PRE.normal.periodicDose.pulse.count,$PRE.normal.periodicDose.pulse.T_start,$PRE.normal.periodicDose.absorptionLumen.rising,$PRE.normal.central.rising,normal.periodicDose.pulse.count,normal.periodicDose.pulse.T_start,normal.periodicDose.absorptionLumen.rising,normal.central.rising,$whenCondition15,$whenCondition14,$whenCondition13,$whenCondition12,$whenCondition11,$PRE.poor_met.periodicDose.pulse.count,$PRE.poor_met.periodicDose.pulse.T_start,$PRE.poor_met.periodicDose.absorptionLumen.rising,$PRE.poor_met.central.rising,poor_met.periodicDose.pulse.count,poor_met.periodicDose.pulse.T_start,poor_met.periodicDose.absorptionLumen.rising,poor_met.central.rising,$whenCondition10,$whenCondition9,$whenCondition8,$whenCondition7,$whenCondition6,$PRE.rapid_met.periodicDose.pulse.count,$PRE.rapid_met.periodicDose.pulse.T_start,$PRE.rapid_met.periodicDose.absorptionLumen.rising,$PRE.rapid_met.central.rising,rapid_met.periodicDose.pulse.count,rapid_met.periodicDose.pulse.T_start,rapid_met.periodicDose.absorptionLumen.rising,rapid_met.central.rising,$whenCondition5,$whenCondition4,$whenCondition3,$whenCondition2,$whenCondition1) * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (150): * Single equations (assignments): 141 * Array equations: 0 * Algorithm blocks: 9 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of prepare postOptimizeDAE: time 0.0004553/0.0269, allocations: 0.5632 MB / 0.6772 GB, free: 16.93 MB / 0.5262 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0001244/0.02702, allocations: 125.9 kB / 0.6774 GB, free: 16.88 MB / 0.5262 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 8.825e-05/0.02711, allocations: 82.97 kB / 0.6774 GB, free: 16.82 MB / 0.5262 GB Notification: Performance of postOpt inlineArrayEqn (simulation): time 9.088e-06/0.02712, allocations: 10.66 kB / 0.6775 GB, free: 16.82 MB / 0.5262 GB Notification: Performance of postOpt constantLinearSystem (simulation): time 1.513e-05/0.02714, allocations: 1.469 kB / 0.6775 GB, free: 16.82 MB / 0.5262 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 9.458e-06/0.02715, allocations: 3.703 kB / 0.6775 GB, free: 16.82 MB / 0.5262 GB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.001834/0.02898, allocations: 2.147 MB / 0.6796 GB, free: 15.43 MB / 0.5262 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 4.228e-06/0.02898, allocations: 2.266 kB / 0.6796 GB, free: 15.43 MB / 0.5262 GB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0004843/0.02947, allocations: 158.8 kB / 0.6797 GB, free: 15.42 MB / 0.5262 GB Notification: Performance of postOpt tearingSystem (simulation): time 7.374e-06/0.02948, allocations: 3.734 kB / 0.6797 GB, free: 15.42 MB / 0.5262 GB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 5.84e-05/0.02953, allocations: 36.92 kB / 0.6797 GB, free: 15.4 MB / 0.5262 GB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 5.029e-06/0.02954, allocations: 7.703 kB / 0.6798 GB, free: 15.4 MB / 0.5262 GB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.715e-06/0.02954, allocations: 5.188 kB / 0.6798 GB, free: 15.39 MB / 0.5262 GB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.001436/0.03098, allocations: 1.929 MB / 0.6816 GB, free: 14.12 MB / 0.5262 GB Notification: Performance of postOpt removeConstants (simulation): time 0.0002908/0.03127, allocations: 168 kB / 0.6818 GB, free: 14.02 MB / 0.5262 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001154/0.03138, allocations: 53.61 kB / 0.6819 GB, free: 13.98 MB / 0.5262 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0003/0.03168, allocations: 39.89 kB / 0.6819 GB, free: 13.98 MB / 0.5262 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0001755/0.03186, allocations: 94.64 kB / 0.682 GB, free: 13.95 MB / 0.5262 GB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 4.275e-05/0.0319, allocations: 40.17 kB / 0.682 GB, free: 13.94 MB / 0.5262 GB Notification: Performance of sorting global known variables: time 0.0002592/0.03216, allocations: 348.5 kB / 0.6824 GB, free: 13.77 MB / 0.5262 GB Notification: Performance of sort global known variables: time 6.1e-08/0.03216, allocations: 0 / 0.6824 GB, free: 13.77 MB / 0.5262 GB Notification: Performance of remove unused functions: time 0.0006753/0.03284, allocations: 245.2 kB / 0.6826 GB, free: 13.74 MB / 0.5262 GB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 3 * Number of states: 21 (rapid_met.central.C,rapid_met.central.AUC,rapid_met.elim.MExc,rapid_met.periodicDose.TotalCumulativeMass,rapid_met.periodicDose.absorptionLumen.C,rapid_met.periodicDose.absorptionLumen.AUC,rapid_met.periodicDose.variableDose.TotalCumulativeMass,poor_met.central.C,poor_met.central.AUC,poor_met.elim.MExc,poor_met.periodicDose.TotalCumulativeMass,poor_met.periodicDose.absorptionLumen.C,poor_met.periodicDose.absorptionLumen.AUC,poor_met.periodicDose.variableDose.TotalCumulativeMass,normal.central.C,normal.central.AUC,normal.elim.MExc,normal.periodicDose.TotalCumulativeMass,normal.periodicDose.absorptionLumen.C,normal.periodicDose.absorptionLumen.AUC,normal.periodicDose.variableDose.TotalCumulativeMass) * Number of discrete variables: 39 ($whenCondition1,$whenCondition2,$whenCondition3,$whenCondition4,$whenCondition5,rapid_met.central.Cmax,rapid_met.central.Cmin,rapid_met.central.rising,rapid_met.periodicDose.absorptionLumen.Cmax,rapid_met.periodicDose.absorptionLumen.Cmin,rapid_met.periodicDose.absorptionLumen.rising,rapid_met.periodicDose.pulse.T_start,rapid_met.periodicDose.pulse.count,$whenCondition6,$whenCondition7,$whenCondition8,$whenCondition9,$whenCondition10,poor_met.central.Cmax,poor_met.central.Cmin,poor_met.central.rising,poor_met.periodicDose.absorptionLumen.Cmax,poor_met.periodicDose.absorptionLumen.Cmin,poor_met.periodicDose.absorptionLumen.rising,poor_met.periodicDose.pulse.T_start,poor_met.periodicDose.pulse.count,$whenCondition11,$whenCondition12,$whenCondition13,$whenCondition14,$whenCondition15,normal.central.Cmax,normal.central.Cmin,normal.central.rising,normal.periodicDose.absorptionLumen.Cmax,normal.periodicDose.absorptionLumen.Cmin,normal.periodicDose.absorptionLumen.rising,normal.periodicDose.pulse.T_start,normal.periodicDose.pulse.count) * Number of discrete states: 33 (normal.periodicDose.pulse.count,normal.central.Cmin,$whenCondition15,normal.central.Cmax,$whenCondition14,normal.central.rising,normal.periodicDose.absorptionLumen.Cmin,$whenCondition13,normal.periodicDose.absorptionLumen.Cmax,$whenCondition12,normal.periodicDose.absorptionLumen.rising,poor_met.periodicDose.pulse.count,poor_met.central.Cmin,$whenCondition10,poor_met.central.Cmax,$whenCondition9,poor_met.central.rising,poor_met.periodicDose.absorptionLumen.Cmin,$whenCondition8,poor_met.periodicDose.absorptionLumen.Cmax,$whenCondition7,poor_met.periodicDose.absorptionLumen.rising,rapid_met.periodicDose.pulse.count,rapid_met.central.Cmin,$whenCondition5,rapid_met.central.Cmax,$whenCondition4,rapid_met.central.rising,rapid_met.periodicDose.absorptionLumen.Cmin,$whenCondition3,rapid_met.periodicDose.absorptionLumen.Cmax,$whenCondition2,rapid_met.periodicDose.absorptionLumen.rising) * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (87): * Single equations (assignments): 75 * Array equations: 0 * Algorithm blocks: 6 * Record equations: 0 * When equations: 6 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of Backend phase and start with SimCode phase: time 0.0001659/0.033, allocations: 189.9 kB / 0.6828 GB, free: 13.62 MB / 0.5262 GB Notification: Performance of simCode: created initialization part: time 0.0011/0.0341, allocations: 1.5 MB / 0.6842 GB, free: 12.43 MB / 0.5262 GB Notification: Performance of simCode: created event and clocks part: time 2.775e-06/0.03411, allocations: 0.625 kB / 0.6842 GB, free: 12.43 MB / 0.5262 GB Notification: Performance of simCode: created simulation system equations: time 0.0004848/0.03459, allocations: 0.8186 MB / 0.685 GB, free: 11.77 MB / 0.5262 GB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0009375/0.03553, allocations: 278.7 kB / 0.6853 GB, free: 11.7 MB / 0.5262 GB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.003269/0.0388, allocations: 2.308 MB / 0.6876 GB, free: 10.2 MB / 0.5262 GB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0001397/0.03894, allocations: 174.3 kB / 0.6877 GB, free: 10.12 MB / 0.5262 GB Notification: Performance of simCode: alias equations: time 0.0003969/0.03933, allocations: 90.97 kB / 0.6878 GB, free: 10.1 MB / 0.5262 GB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0001453/0.03948, allocations: 68.16 kB / 0.6879 GB, free: 10.09 MB / 0.5262 GB Notification: Performance of SimCode: time 1.733e-06/0.03948, allocations: 0 / 0.6879 GB, free: 10.09 MB / 0.5262 GB Notification: Performance of Templates: time 0.01651/0.05599, allocations: 13.96 MB / 0.7015 GB, free: 0.5898 MB / 0.5262 GB " [Timeout remaining time 660] make -j1 -f Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.makefile [Timeout 660] (rm -f Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.pipe ; mkfifo Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.pipe ; head -c 1048576 < Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.pipe >> ../files/Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.sim & ./Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment -abortSlowSimulation -alarm=240 -lv LOG_STATS > Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.pipe 2>&1) [Timeout 240] [Calling sys.exit(0), Time elapsed: 4.876258039148524]