Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0009833/0.0009833, allocations: 92.2 kB / 20.19 MB, free: 4.363 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001097/0.001097, allocations: 173 kB / 23.5 MB, free: 1.059 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9597/0.9597, allocations: 177.1 MB / 203.8 MB, free: 5.645 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo", uses=false) [Timeout 180]
"[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Examples/package.order:0:0-0:0:readonly] Warning: The package.order file does not list all .mo files and directories (containing package.mo) present in its directory.
Missing names are:
	Paracetamol_Experiment
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo): time 1.547/1.547, allocations: 273.5 MB / 0.5213 GB, free: 14.8 MB / 458.7 MB
"
[Timeout remaining time 178]
Using package Pharmacolibrary with version 25.09 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine,tolerance=1e-06,outputFormat="empty",numberOfIntervals=500,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine")
translateModel(Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine,tolerance=1e-06,outputFormat="empty",numberOfIntervals=500,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 2.094e-06/2.094e-06, allocations: 1.312 kB / 0.647 GB, free: 38.53 MB / 0.5262 GB
Notification: Performance of FrontEnd - Absyn->SCode: time 2.73e-05/2.94e-05, allocations: 2.312 kB / 0.647 GB, free: 38.52 MB / 0.5262 GB
Notification: Performance of NFInst.instantiate(Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine): time 0.007923/0.007952, allocations: 6.89 MB / 0.6537 GB, free: 33.99 MB / 0.5262 GB
Notification: Performance of NFInst.instExpressions: time 0.003605/0.01156, allocations: 1.307 MB / 0.655 GB, free: 33.08 MB / 0.5262 GB
Notification: Performance of NFInst.updateImplicitVariability: time 0.001434/0.01299, allocations: 5.812 kB / 0.655 GB, free: 33.08 MB / 0.5262 GB
Notification: Performance of NFTyping.typeComponents: time 0.0006088/0.0136, allocations: 109 kB / 0.6551 GB, free: 33.02 MB / 0.5262 GB
Notification: Performance of NFTyping.typeBindings: time 0.001302/0.0149, allocations: 350.7 kB / 0.6554 GB, free: 32.77 MB / 0.5262 GB
Notification: Performance of NFTyping.typeClassSections: time 0.0009387/0.01584, allocations: 277.7 kB / 0.6557 GB, free: 32.58 MB / 0.5262 GB
Notification: Performance of NFFlatten.flatten: time 0.001517/0.01736, allocations: 1.232 MB / 0.6569 GB, free: 31.88 MB / 0.5262 GB
Notification: Performance of NFFlatten.resolveConnections: time 0.0004328/0.01779, allocations: 175.5 kB / 0.6571 GB, free: 31.77 MB / 0.5262 GB
Notification: Performance of NFEvalConstants.evaluate: time 0.001013/0.0188, allocations: 0.6219 MB / 0.6577 GB, free: 31.48 MB / 0.5262 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.0008803/0.01968, allocations: 360.5 kB / 0.658 GB, free: 31.36 MB / 0.5262 GB
Notification: Performance of NFPackage.collectConstants: time 0.0002945/0.01998, allocations: 111.7 kB / 0.6581 GB, free: 31.36 MB / 0.5262 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.0002452/0.02022, allocations: 110 kB / 0.6582 GB, free: 31.36 MB / 0.5262 GB
Notification: Performance of NFScalarize.scalarize: time 0.0001382/0.02036, allocations: 201.2 kB / 0.6584 GB, free: 31.21 MB / 0.5262 GB
Notification: Performance of NFVerifyModel.verify: time 0.0005216/0.02088, allocations: 369.4 kB / 0.6588 GB, free: 31.04 MB / 0.5262 GB
Notification: Performance of NFConvertDAE.convert: time 0.001001/0.02189, allocations: 0.7179 MB / 0.6595 GB, free: 30.65 MB / 0.5262 GB
Notification: Performance of FrontEnd - DAE generated: time 5.891e-06/0.02189, allocations: 1.281 kB / 0.6595 GB, free: 30.65 MB / 0.5262 GB
Notification: Performance of FrontEnd: time 1.352e-06/0.02189, allocations: 0 / 0.6595 GB, free: 30.65 MB / 0.5262 GB
Notification: Performance of Transformations before backend: time 1.671e-05/0.02191, allocations: 0 / 0.6595 GB, free: 30.65 MB / 0.5262 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 146
 * Number of variables: 146
Notification: Performance of Generate backend data structure: time 0.002142/0.02405, allocations: 1.418 MB / 0.6609 GB, free: 29.53 MB / 0.5262 GB
Notification: Performance of prepare preOptimizeDAE: time 5.442e-05/0.02411, allocations: 15.77 kB / 0.6609 GB, free: 29.53 MB / 0.5262 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0003034/0.02441, allocations: 139 kB / 0.661 GB, free: 29.46 MB / 0.5262 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.0007345/0.02514, allocations: 442.1 kB / 0.6614 GB, free: 29.13 MB / 0.5262 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 4.875e-05/0.02519, allocations: 47.97 kB / 0.6615 GB, free: 29.11 MB / 0.5262 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0001352/0.02533, allocations: 71.92 kB / 0.6616 GB, free: 29.09 MB / 0.5262 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.001183/0.02651, allocations: 0.7122 MB / 0.6622 GB, free: 28.64 MB / 0.5262 GB
Notification: Performance of preOpt findStateOrder (simulation): time 5.129e-05/0.02656, allocations: 8.141 kB / 0.6623 GB, free: 28.63 MB / 0.5262 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 6.618e-05/0.02663, allocations: 29.06 kB / 0.6623 GB, free: 28.61 MB / 0.5262 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 2.32e-05/0.02665, allocations: 17.94 kB / 0.6623 GB, free: 28.61 MB / 0.5262 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.000822/0.02747, allocations: 480.5 kB / 0.6628 GB, free: 28.37 MB / 0.5262 GB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.002771/0.03024, allocations: 2.195 MB / 0.6649 GB, free: 26.67 MB / 0.5262 GB
Notification: Performance of preOpt comSubExp (simulation): time 0.001117/0.03136, allocations: 0.629 MB / 0.6655 GB, free: 26.22 MB / 0.5262 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0004299/0.03179, allocations: 362.5 kB / 0.6659 GB, free: 25.94 MB / 0.5262 GB
Notification: Performance of preOpt evalFunc (simulation): time 4.965e-05/0.03184, allocations: 14.06 kB / 0.6659 GB, free: 25.94 MB / 0.5262 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0009363/0.03278, allocations: 0.989 MB / 0.6668 GB, free: 25.16 MB / 0.5262 GB
Notification: Performance of pre-optimization done (n=101): time 3.767e-06/0.03278, allocations: 0 / 0.6668 GB, free: 25.16 MB / 0.5262 GB
Notification: Performance of matching and sorting (n=107): time 0.004833/0.03761, allocations: 3.155 MB / 0.6699 GB, free: 22.96 MB / 0.5262 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0001813/0.0378, allocations: 0.6471 MB / 0.6706 GB, free: 22.2 MB / 0.5262 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0006587/0.03845, allocations: 0.5222 MB / 0.6711 GB, free: 21.92 MB / 0.5262 GB
Notification: Performance of collectPreVariables (initialization): time 9.16e-05/0.03855, allocations: 63.09 kB / 0.6711 GB, free: 21.87 MB / 0.5262 GB
Notification: Performance of collectInitialEqns (initialization): time 0.0002177/0.03876, allocations: 340.8 kB / 0.6714 GB, free: 21.58 MB / 0.5262 GB
Notification: Performance of collectInitialBindings (initialization): time 0.000277/0.03904, allocations: 364.9 kB / 0.6718 GB, free: 21.3 MB / 0.5262 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0003113/0.03935, allocations: 194.3 kB / 0.672 GB, free: 21.2 MB / 0.5262 GB
Notification: Performance of setup shared object (initialization): time 0.0002037/0.03956, allocations: 0.5636 MB / 0.6725 GB, free: 20.67 MB / 0.5262 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0005736/0.04013, allocations: 453.5 kB / 0.673 GB, free: 20.33 MB / 0.5262 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.0006878/0.04082, allocations: 0.8831 MB / 0.6738 GB, free: 19.41 MB / 0.5262 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.001574/0.04239, allocations: 1.581 MB / 0.6754 GB, free: 17.95 MB / 0.5262 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.114e-05/0.0424, allocations: 3.25 kB / 0.6754 GB, free: 17.95 MB / 0.5262 GB
Notification: Performance of matching and sorting (n=161) (initialization): time 0.001935/0.04434, allocations: 1.38 MB / 0.6767 GB, free: 17.07 MB / 0.5262 GB
Notification: Performance of prepare postOptimizeDAE: time 0.0001037/0.04444, allocations: 266.3 kB / 0.677 GB, free: 16.79 MB / 0.5262 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 2.125e-05/0.04446, allocations: 13.28 kB / 0.677 GB, free: 16.78 MB / 0.5262 GB
Notification: Performance of postOpt tearingSystem (initialization): time 4.706e-05/0.04451, allocations: 14.78 kB / 0.677 GB, free: 16.78 MB / 0.5262 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0009153/0.04542, allocations: 258.3 kB / 0.6772 GB, free: 16.75 MB / 0.5262 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 2.759e-05/0.04545, allocations: 20.5 kB / 0.6773 GB, free: 16.75 MB / 0.5262 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0007578/0.04621, allocations: 57.88 kB / 0.6773 GB, free: 16.73 MB / 0.5262 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 9.244e-05/0.0463, allocations: 56.27 kB / 0.6774 GB, free: 16.71 MB / 0.5262 GB
Warning: Assuming fixed start value for the following 30 variables:
         green_tee_drinker.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true )  \"area under curve\" type: Real
         green_tee_drinker.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true )  \"Total dose adminitrated by this source\" type: Real
         green_tee_drinker.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true )  \"area under curve\" type: Real
         green_tee_drinker.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true )  \"Total dose adminitrated by this source\" type: Real
         black_tea_drinker.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true )  \"area under curve\" type: Real
         black_tea_drinker.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true )  \"Total dose adminitrated by this source\" type: Real
         black_tea_drinker.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true )  \"area under curve\" type: Real
         black_tea_drinker.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true )  \"Total dose adminitrated by this source\" type: Real
         coffee_drinker.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true )  \"area under curve\" type: Real
         coffee_drinker.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true )  \"Total dose adminitrated by this source\" type: Real
         coffee_drinker.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true )  \"area under curve\" type: Real
         coffee_drinker.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true )  \"Total dose adminitrated by this source\" type: Real
         coffee_drinker.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         coffee_drinker.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         coffee_drinker.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         coffee_drinker.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         black_tea_drinker.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         black_tea_drinker.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         black_tea_drinker.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         black_tea_drinker.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         green_tee_drinker.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         green_tee_drinker.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         green_tee_drinker.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         green_tee_drinker.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         coffee_drinker.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true )  type: Boolean
         coffee_drinker.central.rising:DISCRETE(fixed = true protected = true )  type: Boolean
         black_tea_drinker.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true )  type: Boolean
         black_tea_drinker.central.rising:DISCRETE(fixed = true protected = true )  type: Boolean
         green_tee_drinker.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true )  type: Boolean
         green_tee_drinker.central.rising:DISCRETE(fixed = true protected = true )  type: Boolean
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 38
 * Number of states: 0 ()
 * Number of discrete variables: 63 ($PRE.coffee_drinker.central.Cmin,coffee_drinker.central.Cmin,$PRE.coffee_drinker.central.Cmax,coffee_drinker.central.Cmax,$PRE.coffee_drinker.periodicDose.absorptionLumen.Cmin,coffee_drinker.periodicDose.absorptionLumen.Cmin,$PRE.coffee_drinker.periodicDose.absorptionLumen.Cmax,coffee_drinker.periodicDose.absorptionLumen.Cmax,$PRE.black_tea_drinker.central.Cmin,black_tea_drinker.central.Cmin,$PRE.black_tea_drinker.central.Cmax,black_tea_drinker.central.Cmax,$PRE.black_tea_drinker.periodicDose.absorptionLumen.Cmin,black_tea_drinker.periodicDose.absorptionLumen.Cmin,$PRE.black_tea_drinker.periodicDose.absorptionLumen.Cmax,black_tea_drinker.periodicDose.absorptionLumen.Cmax,$PRE.green_tee_drinker.central.Cmin,green_tee_drinker.central.Cmin,$PRE.green_tee_drinker.central.Cmax,green_tee_drinker.central.Cmax,$PRE.green_tee_drinker.periodicDose.absorptionLumen.Cmin,green_tee_drinker.periodicDose.absorptionLumen.Cmin,$PRE.green_tee_drinker.periodicDose.absorptionLumen.Cmax,green_tee_drinker.periodicDose.absorptionLumen.Cmax,$PRE.coffee_drinker.periodicDose.pulse.count,$PRE.coffee_drinker.periodicDose.pulse.T_start,$PRE.coffee_drinker.periodicDose.absorptionLumen.rising,$PRE.coffee_drinker.central.rising,coffee_drinker.periodicDose.pulse.count,coffee_drinker.periodicDose.pulse.T_start,coffee_drinker.periodicDose.absorptionLumen.rising,coffee_drinker.central.rising,$whenCondition15,$whenCondition14,$whenCondition13,$whenCondition12,$whenCondition11,$PRE.black_tea_drinker.periodicDose.pulse.count,$PRE.black_tea_drinker.periodicDose.pulse.T_start,$PRE.black_tea_drinker.periodicDose.absorptionLumen.rising,$PRE.black_tea_drinker.central.rising,black_tea_drinker.periodicDose.pulse.count,black_tea_drinker.periodicDose.pulse.T_start,black_tea_drinker.periodicDose.absorptionLumen.rising,black_tea_drinker.central.rising,$whenCondition10,$whenCondition9,$whenCondition8,$whenCondition7,$whenCondition6,$PRE.green_tee_drinker.periodicDose.pulse.count,$PRE.green_tee_drinker.periodicDose.pulse.T_start,$PRE.green_tee_drinker.periodicDose.absorptionLumen.rising,$PRE.green_tee_drinker.central.rising,green_tee_drinker.periodicDose.pulse.count,green_tee_drinker.periodicDose.pulse.T_start,green_tee_drinker.periodicDose.absorptionLumen.rising,green_tee_drinker.central.rising,$whenCondition5,$whenCondition4,$whenCondition3,$whenCondition2,$whenCondition1)
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (152):
 * Single equations (assignments): 143
 * Array equations: 0
 * Algorithm blocks: 9
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of prepare postOptimizeDAE: time 0.0007454/0.04705, allocations: 0.5568 MB / 0.6779 GB, free: 16.24 MB / 0.5262 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0002469/0.04729, allocations: 132.5 kB / 0.678 GB, free: 16.18 MB / 0.5262 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.0001558/0.04745, allocations: 84.45 kB / 0.6781 GB, free: 16.12 MB / 0.5262 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.222e-05/0.04746, allocations: 9.875 kB / 0.6781 GB, free: 16.12 MB / 0.5262 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 1.908e-05/0.04748, allocations: 2.25 kB / 0.6781 GB, free: 16.12 MB / 0.5262 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.514e-05/0.0475, allocations: 5.594 kB / 0.6781 GB, free: 16.12 MB / 0.5262 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.003076/0.05057, allocations: 2.149 MB / 0.6802 GB, free: 14.73 MB / 0.5262 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 7.614e-06/0.05058, allocations: 2.25 kB / 0.6802 GB, free: 14.73 MB / 0.5262 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0008045/0.05139, allocations: 165 kB / 0.6804 GB, free: 14.72 MB / 0.5262 GB
Notification: Performance of postOpt tearingSystem (simulation): time 1.192e-05/0.0514, allocations: 4.656 kB / 0.6804 GB, free: 14.72 MB / 0.5262 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 9.772e-05/0.05149, allocations: 37.58 kB / 0.6804 GB, free: 14.71 MB / 0.5262 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 1.061e-05/0.05151, allocations: 8.781 kB / 0.6805 GB, free: 14.7 MB / 0.5262 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 4.488e-06/0.05151, allocations: 5.703 kB / 0.6805 GB, free: 14.7 MB / 0.5262 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.002415/0.05393, allocations: 1.962 MB / 0.6824 GB, free: 13.38 MB / 0.5262 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.0004632/0.05439, allocations: 173 kB / 0.6825 GB, free: 13.28 MB / 0.5262 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0002032/0.05459, allocations: 46.27 kB / 0.6826 GB, free: 13.25 MB / 0.5262 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.000526/0.05512, allocations: 43.89 kB / 0.6826 GB, free: 13.24 MB / 0.5262 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.000267/0.05538, allocations: 95.38 kB / 0.6827 GB, free: 13.22 MB / 0.5262 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 7.855e-05/0.05546, allocations: 38.3 kB / 0.6828 GB, free: 13.21 MB / 0.5262 GB
Notification: Performance of sorting global known variables: time 0.0004456/0.05591, allocations: 349.7 kB / 0.6831 GB, free: 13.04 MB / 0.5262 GB
Notification: Performance of sort global known variables: time 4.41e-07/0.05591, allocations: 0 / 0.6831 GB, free: 13.04 MB / 0.5262 GB
Notification: Performance of remove unused functions: time 0.001189/0.0571, allocations: 247 kB / 0.6833 GB, free: 13.01 MB / 0.5262 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 5
 * Number of states: 21 (green_tee_drinker.central.C,green_tee_drinker.central.AUC,green_tee_drinker.elim.MExc,green_tee_drinker.periodicDose.TotalCumulativeMass,green_tee_drinker.periodicDose.absorptionLumen.C,green_tee_drinker.periodicDose.absorptionLumen.AUC,green_tee_drinker.periodicDose.variableDose.TotalCumulativeMass,black_tea_drinker.central.C,black_tea_drinker.central.AUC,black_tea_drinker.elim.MExc,black_tea_drinker.periodicDose.TotalCumulativeMass,black_tea_drinker.periodicDose.absorptionLumen.C,black_tea_drinker.periodicDose.absorptionLumen.AUC,black_tea_drinker.periodicDose.variableDose.TotalCumulativeMass,coffee_drinker.central.C,coffee_drinker.central.AUC,coffee_drinker.elim.MExc,coffee_drinker.periodicDose.TotalCumulativeMass,coffee_drinker.periodicDose.absorptionLumen.C,coffee_drinker.periodicDose.absorptionLumen.AUC,coffee_drinker.periodicDose.variableDose.TotalCumulativeMass)
 * Number of discrete variables: 39 ($whenCondition1,$whenCondition2,$whenCondition3,$whenCondition4,$whenCondition5,green_tee_drinker.central.Cmax,green_tee_drinker.central.Cmin,green_tee_drinker.central.rising,green_tee_drinker.periodicDose.absorptionLumen.Cmax,green_tee_drinker.periodicDose.absorptionLumen.Cmin,green_tee_drinker.periodicDose.absorptionLumen.rising,green_tee_drinker.periodicDose.pulse.T_start,green_tee_drinker.periodicDose.pulse.count,$whenCondition6,$whenCondition7,$whenCondition8,$whenCondition9,$whenCondition10,black_tea_drinker.central.Cmax,black_tea_drinker.central.Cmin,black_tea_drinker.central.rising,black_tea_drinker.periodicDose.absorptionLumen.Cmax,black_tea_drinker.periodicDose.absorptionLumen.Cmin,black_tea_drinker.periodicDose.absorptionLumen.rising,black_tea_drinker.periodicDose.pulse.T_start,black_tea_drinker.periodicDose.pulse.count,$whenCondition11,$whenCondition12,$whenCondition13,$whenCondition14,$whenCondition15,coffee_drinker.central.Cmax,coffee_drinker.central.Cmin,coffee_drinker.central.rising,coffee_drinker.periodicDose.absorptionLumen.Cmax,coffee_drinker.periodicDose.absorptionLumen.Cmin,coffee_drinker.periodicDose.absorptionLumen.rising,coffee_drinker.periodicDose.pulse.T_start,coffee_drinker.periodicDose.pulse.count)
 * Number of discrete states: 33 (coffee_drinker.periodicDose.pulse.count,coffee_drinker.central.Cmin,$whenCondition15,coffee_drinker.central.Cmax,$whenCondition14,coffee_drinker.central.rising,coffee_drinker.periodicDose.absorptionLumen.Cmin,$whenCondition13,coffee_drinker.periodicDose.absorptionLumen.Cmax,$whenCondition12,coffee_drinker.periodicDose.absorptionLumen.rising,black_tea_drinker.periodicDose.pulse.count,black_tea_drinker.central.Cmin,$whenCondition10,black_tea_drinker.central.Cmax,$whenCondition9,black_tea_drinker.central.rising,black_tea_drinker.periodicDose.absorptionLumen.Cmin,$whenCondition8,black_tea_drinker.periodicDose.absorptionLumen.Cmax,$whenCondition7,black_tea_drinker.periodicDose.absorptionLumen.rising,green_tee_drinker.periodicDose.pulse.count,green_tee_drinker.central.Cmin,$whenCondition5,green_tee_drinker.central.Cmax,$whenCondition4,green_tee_drinker.central.rising,green_tee_drinker.periodicDose.absorptionLumen.Cmin,$whenCondition3,green_tee_drinker.periodicDose.absorptionLumen.Cmax,$whenCondition2,green_tee_drinker.periodicDose.absorptionLumen.rising)
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (89):
 * Single equations (assignments): 77
 * Array equations: 0
 * Algorithm blocks: 6
 * Record equations: 0
 * When equations: 6
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of Backend phase and start with SimCode phase: time 0.0002605/0.05736, allocations: 190.8 kB / 0.6835 GB, free: 12.89 MB / 0.5262 GB
Notification: Performance of simCode: created initialization part: time 0.001709/0.05907, allocations: 1.519 MB / 0.685 GB, free: 11.69 MB / 0.5262 GB
Notification: Performance of simCode: created event and clocks part: time 3.647e-06/0.05907, allocations: 0 / 0.685 GB, free: 11.69 MB / 0.5262 GB
Notification: Performance of simCode: created simulation system equations: time 0.000779/0.05985, allocations: 0.8232 MB / 0.6858 GB, free: 11.04 MB / 0.5262 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.001504/0.06135, allocations: 293.3 kB / 0.6861 GB, free: 10.95 MB / 0.5262 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.004166/0.06552, allocations: 2.326 MB / 0.6883 GB, free: 9.434 MB / 0.5262 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0001575/0.06568, allocations: 175.4 kB / 0.6885 GB, free: 9.348 MB / 0.5262 GB
Notification: Performance of simCode: alias equations: time 0.0004112/0.06609, allocations: 95.91 kB / 0.6886 GB, free: 9.328 MB / 0.5262 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0001491/0.06624, allocations: 73.42 kB / 0.6887 GB, free: 9.312 MB / 0.5262 GB
Notification: Performance of SimCode: time 1.974e-06/0.06624, allocations: 0 / 0.6887 GB, free: 9.312 MB / 0.5262 GB
Notification: Performance of Templates: time 0.017/0.08324, allocations: 14.17 MB / 0.7025 GB, free: 15.46 MB / 0.5418 GB
"
[Timeout remaining time 660]
make -j1 -f Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine.makefile [Timeout 660]
(rm -f Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine.pipe ; mkfifo Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine.pipe ; head -c 1048576 < Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine.pipe >> ../files/Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine.sim & ./Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine -abortSlowSimulation -alarm=240  -lv LOG_STATS > Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 4.8405776978470385]