Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001576/0.001576, allocations: 92.2 kB / 20.19 MB, free: 4.363 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001774/0.001774, allocations: 173 kB / 23.49 MB, free: 1.062 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9417/0.9417, allocations: 177.1 MB / 203.8 MB, free: 5.621 MB / 186.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo", uses=false) [Timeout 180] "[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Examples/package.order:0:0-0:0:readonly] Warning: The package.order file does not list all .mo files and directories (containing package.mo) present in its directory. Missing names are: Paracetamol_Experiment Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo): time 1.658/1.658, allocations: 273.5 MB / 0.5213 GB, free: 14.81 MB / 458.7 MB " [Timeout remaining time 178] Using package Pharmacolibrary with version 25.09 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites,tolerance=1e-09,outputFormat="empty",numberOfIntervals=864000,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites") translateModel(Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites,tolerance=1e-09,outputFormat="empty",numberOfIntervals=864000,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites") [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 2.485e-06/2.485e-06, allocations: 0 / 0.6472 GB, free: 38.48 MB / 0.5262 GB Notification: Performance of FrontEnd - Absyn->SCode: time 1.676e-05/1.925e-05, allocations: 3.625 kB / 0.6472 GB, free: 38.48 MB / 0.5262 GB Notification: Performance of NFInst.instantiate(Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites): time 0.003851/0.003871, allocations: 5.721 MB / 0.6528 GB, free: 34.77 MB / 0.5262 GB Notification: Performance of NFInst.instExpressions: time 0.001869/0.00574, allocations: 1.309 MB / 0.654 GB, free: 33.86 MB / 0.5262 GB Notification: Performance of NFInst.updateImplicitVariability: time 0.0002876/0.006027, allocations: 7.094 kB / 0.654 GB, free: 33.86 MB / 0.5262 GB Notification: Performance of NFTyping.typeComponents: time 0.0002099/0.006237, allocations: 132.3 kB / 0.6542 GB, free: 33.78 MB / 0.5262 GB Notification: Performance of NFTyping.typeBindings: time 0.0004547/0.006692, allocations: 361.8 kB / 0.6545 GB, free: 33.52 MB / 0.5262 GB Notification: Performance of NFTyping.typeClassSections: time 0.0003769/0.007069, allocations: 266 kB / 0.6548 GB, free: 33.35 MB / 0.5262 GB Notification: Performance of NFFlatten.flatten: time 0.0007413/0.00781, allocations: 1.274 MB / 0.656 GB, free: 32.64 MB / 0.5262 GB Notification: Performance of NFFlatten.resolveConnections: time 0.0002936/0.008104, allocations: 213.9 kB / 0.6562 GB, free: 32.51 MB / 0.5262 GB Notification: Performance of NFEvalConstants.evaluate: time 0.0005836/0.008687, allocations: 0.6542 MB / 0.6569 GB, free: 32.22 MB / 0.5262 GB Notification: Performance of NFSimplifyModel.simplify: time 0.0005389/0.009226, allocations: 393 kB / 0.6572 GB, free: 32.09 MB / 0.5262 GB Notification: Performance of NFPackage.collectConstants: time 0.0001691/0.009395, allocations: 112 kB / 0.6573 GB, free: 32.09 MB / 0.5262 GB Notification: Performance of NFFlatten.collectFunctions: time 0.0001788/0.009574, allocations: 109.4 kB / 0.6574 GB, free: 32.09 MB / 0.5262 GB Notification: Performance of NFScalarize.scalarize: time 8.256e-05/0.009657, allocations: 205.7 kB / 0.6576 GB, free: 31.94 MB / 0.5262 GB Notification: Performance of NFVerifyModel.verify: time 0.0002867/0.009943, allocations: 384.1 kB / 0.658 GB, free: 31.78 MB / 0.5262 GB Notification: Performance of NFConvertDAE.convert: time 0.0005637/0.01051, allocations: 0.7431 MB / 0.6587 GB, free: 31.39 MB / 0.5262 GB Notification: Performance of FrontEnd - DAE generated: time 3.537e-06/0.01051, allocations: 0 / 0.6587 GB, free: 31.39 MB / 0.5262 GB Notification: Performance of FrontEnd: time 1.293e-06/0.01051, allocations: 0 / 0.6587 GB, free: 31.39 MB / 0.5262 GB Notification: Performance of Transformations before backend: time 1.613e-05/0.01053, allocations: 4.938 kB / 0.6587 GB, free: 31.39 MB / 0.5262 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 165 * Number of variables: 165 Notification: Performance of Generate backend data structure: time 0.001254/0.01178, allocations: 1.468 MB / 0.6602 GB, free: 30.25 MB / 0.5262 GB Notification: Performance of prepare preOptimizeDAE: time 3.312e-05/0.01182, allocations: 10.03 kB / 0.6602 GB, free: 30.25 MB / 0.5262 GB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0001761/0.01199, allocations: 158.4 kB / 0.6603 GB, free: 30.18 MB / 0.5262 GB Notification: Performance of preOpt evaluateParameters (simulation): time 0.0003916/0.01238, allocations: 445 kB / 0.6608 GB, free: 29.84 MB / 0.5262 GB Notification: Performance of preOpt simplifyIfEquations (simulation): time 3.07e-05/0.01241, allocations: 57.22 kB / 0.6608 GB, free: 29.82 MB / 0.5262 GB Notification: Performance of preOpt expandDerOperator (simulation): time 7.971e-05/0.01249, allocations: 78.7 kB / 0.6609 GB, free: 29.79 MB / 0.5262 GB Notification: Performance of preOpt clockPartitioning (simulation): time 0.0006909/0.01318, allocations: 0.7185 MB / 0.6616 GB, free: 29.38 MB / 0.5262 GB Notification: Performance of preOpt findStateOrder (simulation): time 2.682e-05/0.01321, allocations: 12.11 kB / 0.6616 GB, free: 29.38 MB / 0.5262 GB Notification: Performance of preOpt replaceEdgeChange (simulation): time 3.803e-05/0.01325, allocations: 30.09 kB / 0.6616 GB, free: 29.36 MB / 0.5262 GB Notification: Performance of preOpt inlineArrayEqn (simulation): time 1.254e-05/0.01326, allocations: 15.38 kB / 0.6616 GB, free: 29.36 MB / 0.5262 GB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.000489/0.01375, allocations: 0.4902 MB / 0.6621 GB, free: 29.11 MB / 0.5262 GB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.001738/0.01549, allocations: 1.967 MB / 0.664 GB, free: 27.8 MB / 0.5262 GB Notification: Performance of preOpt comSubExp (simulation): time 0.0005387/0.01603, allocations: 0.4906 MB / 0.6645 GB, free: 27.52 MB / 0.5262 GB Notification: Performance of preOpt resolveLoops (simulation): time 0.000269/0.0163, allocations: 344.9 kB / 0.6649 GB, free: 27.28 MB / 0.5262 GB Notification: Performance of preOpt evalFunc (simulation): time 2.181e-05/0.01632, allocations: 12.03 kB / 0.6649 GB, free: 27.28 MB / 0.5262 GB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0005091/0.01683, allocations: 0.8924 MB / 0.6657 GB, free: 26.58 MB / 0.5262 GB Notification: Performance of pre-optimization done (n=99): time 2.214e-06/0.01683, allocations: 0 / 0.6657 GB, free: 26.58 MB / 0.5262 GB Notification: Performance of matching and sorting (n=105): time 0.002346/0.01918, allocations: 2.628 MB / 0.6683 GB, free: 24.91 MB / 0.5262 GB Notification: Performance of inlineWhenForInitialization (initialization): time 9.405e-05/0.01927, allocations: 0.5463 MB / 0.6688 GB, free: 24.27 MB / 0.5262 GB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0003549/0.01963, allocations: 0.5159 MB / 0.6693 GB, free: 24 MB / 0.5262 GB Notification: Performance of collectPreVariables (initialization): time 4.688e-05/0.01967, allocations: 58.52 kB / 0.6694 GB, free: 23.95 MB / 0.5262 GB Notification: Performance of collectInitialEqns (initialization): time 0.0001395/0.01981, allocations: 375.8 kB / 0.6698 GB, free: 23.64 MB / 0.5262 GB Notification: Performance of collectInitialBindings (initialization): time 0.0001527/0.01996, allocations: 347.4 kB / 0.6701 GB, free: 23.37 MB / 0.5262 GB Notification: Performance of simplifyInitialFunctions (initialization): time 0.0001678/0.02013, allocations: 188.7 kB / 0.6703 GB, free: 23.27 MB / 0.5262 GB Notification: Performance of setup shared object (initialization): time 9.83e-05/0.02023, allocations: 0.5685 MB / 0.6708 GB, free: 22.74 MB / 0.5262 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.0003269/0.02056, allocations: 463.5 kB / 0.6713 GB, free: 22.39 MB / 0.5262 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.0004069/0.02096, allocations: 0.8324 MB / 0.6721 GB, free: 21.55 MB / 0.5262 GB Notification: Performance of analyzeInitialSystem (initialization): time 0.0009251/0.02189, allocations: 1.524 MB / 0.6736 GB, free: 20.17 MB / 0.5262 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 7.444e-06/0.0219, allocations: 7.156 kB / 0.6736 GB, free: 20.17 MB / 0.5262 GB Notification: Performance of matching and sorting (n=157) (initialization): time 0.001075/0.02297, allocations: 1.362 MB / 0.6749 GB, free: 19.29 MB / 0.5262 GB Notification: Performance of prepare postOptimizeDAE: time 6.488e-05/0.02304, allocations: 266.2 kB / 0.6752 GB, free: 19 MB / 0.5262 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.286e-05/0.02305, allocations: 6.562 kB / 0.6752 GB, free: 19 MB / 0.5262 GB Notification: Performance of postOpt tearingSystem (initialization): time 2.427e-05/0.02307, allocations: 13.06 kB / 0.6752 GB, free: 19 MB / 0.5262 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0005552/0.02363, allocations: 245.2 kB / 0.6754 GB, free: 18.98 MB / 0.5262 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 1.815e-05/0.02365, allocations: 17.8 kB / 0.6754 GB, free: 18.98 MB / 0.5262 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0003487/0.024, allocations: 61.02 kB / 0.6755 GB, free: 18.95 MB / 0.5262 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 4.911e-05/0.02405, allocations: 51.56 kB / 0.6755 GB, free: 18.94 MB / 0.5262 GB Warning: Assuming fixed start value for the following 30 variables: remdesivir.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real remdesivir.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real remdesivir.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real remdesivir.peripheral.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real GS_704277.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real GS_704277.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real GS_704277.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real GS_704277.peripheral.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real GS_441524.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real GS_441524.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real GS_441524.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real GS_441524.peripheral.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real GS_441524.peripheral.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real GS_441524.peripheral.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real GS_441524.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real GS_441524.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real GS_704277.peripheral.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real GS_704277.peripheral.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real GS_704277.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real GS_704277.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real remdesivir.peripheral.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real remdesivir.peripheral.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real remdesivir.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real remdesivir.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real GS_441524.peripheral.rising:DISCRETE(fixed = true protected = true ) type: Boolean GS_441524.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean GS_704277.peripheral.rising:DISCRETE(fixed = true protected = true ) type: Boolean GS_704277.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean remdesivir.peripheral.rising:DISCRETE(fixed = true protected = true ) type: Boolean remdesivir.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 32 * Number of states: 0 () * Number of discrete variables: 63 ($PRE.GS_441524.peripheral.Cmin,GS_441524.peripheral.Cmin,$PRE.GS_441524.peripheral.Cmax,GS_441524.peripheral.Cmax,$PRE.GS_441524.central.Cmin,GS_441524.central.Cmin,$PRE.GS_441524.central.Cmax,GS_441524.central.Cmax,$PRE.GS_704277.peripheral.Cmin,GS_704277.peripheral.Cmin,$PRE.GS_704277.peripheral.Cmax,GS_704277.peripheral.Cmax,$PRE.GS_704277.central.Cmin,GS_704277.central.Cmin,$PRE.GS_704277.central.Cmax,GS_704277.central.Cmax,$PRE.remdesivir.peripheral.Cmin,remdesivir.peripheral.Cmin,$PRE.remdesivir.peripheral.Cmax,remdesivir.peripheral.Cmax,$PRE.remdesivir.central.Cmin,remdesivir.central.Cmin,$PRE.remdesivir.central.Cmax,remdesivir.central.Cmax,$PRE.GS_441524.peripheral.rising,$PRE.GS_441524.periodicDose.pulse.count,$PRE.GS_441524.periodicDose.pulse.T_start,$PRE.GS_441524.central.rising,$PRE.GS_704277.peripheral.rising,$PRE.GS_704277.periodicDose.pulse.count,$PRE.GS_704277.periodicDose.pulse.T_start,$PRE.GS_704277.central.rising,$PRE.remdesivir.peripheral.rising,$PRE.remdesivir.periodicDose.pulse.count,$PRE.remdesivir.periodicDose.pulse.T_start,$PRE.remdesivir.central.rising,GS_441524.peripheral.rising,GS_441524.periodicDose.pulse.count,GS_441524.periodicDose.pulse.T_start,GS_441524.central.rising,GS_704277.peripheral.rising,GS_704277.periodicDose.pulse.count,GS_704277.periodicDose.pulse.T_start,GS_704277.central.rising,remdesivir.peripheral.rising,remdesivir.periodicDose.pulse.count,remdesivir.periodicDose.pulse.T_start,remdesivir.central.rising,$whenCondition12,$whenCondition11,$whenCondition10,$whenCondition9,$whenCondition8,$whenCondition7,$whenCondition6,$whenCondition5,$whenCondition4,$whenCondition3,$whenCondition2,$whenCondition1,$whenCondition13,$whenCondition14,$whenCondition15) * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (148): * Single equations (assignments): 139 * Array equations: 0 * Algorithm blocks: 9 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of prepare postOptimizeDAE: time 0.0003798/0.02443, allocations: 0.5474 MB / 0.6761 GB, free: 18.47 MB / 0.5262 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0001093/0.02453, allocations: 124.8 kB / 0.6762 GB, free: 18.42 MB / 0.5262 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 7.521e-05/0.02461, allocations: 81.08 kB / 0.6763 GB, free: 18.36 MB / 0.5262 GB Notification: Performance of postOpt inlineArrayEqn (simulation): time 6.141e-06/0.02462, allocations: 8.406 kB / 0.6763 GB, free: 18.36 MB / 0.5262 GB Notification: Performance of postOpt constantLinearSystem (simulation): time 1.311e-05/0.02463, allocations: 4.312 kB / 0.6763 GB, free: 18.36 MB / 0.5262 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 8.126e-06/0.02464, allocations: 5.188 kB / 0.6763 GB, free: 18.36 MB / 0.5262 GB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.001674/0.02631, allocations: 1.887 MB / 0.6781 GB, free: 17.24 MB / 0.5262 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 2.805e-06/0.02631, allocations: 4 kB / 0.6781 GB, free: 17.24 MB / 0.5262 GB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0004484/0.02676, allocations: 159.5 kB / 0.6783 GB, free: 17.23 MB / 0.5262 GB Notification: Performance of postOpt tearingSystem (simulation): time 6.162e-06/0.02677, allocations: 7.719 kB / 0.6783 GB, free: 17.22 MB / 0.5262 GB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 4.91e-05/0.02682, allocations: 35.89 kB / 0.6783 GB, free: 17.21 MB / 0.5262 GB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 3.747e-06/0.02682, allocations: 3.312 kB / 0.6783 GB, free: 17.21 MB / 0.5262 GB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.154e-06/0.02682, allocations: 7.922 kB / 0.6783 GB, free: 17.2 MB / 0.5262 GB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.001318/0.02814, allocations: 1.712 MB / 0.68 GB, free: 16.15 MB / 0.5262 GB Notification: Performance of postOpt removeConstants (simulation): time 7.667e-05/0.02822, allocations: 75.25 kB / 0.6801 GB, free: 16.1 MB / 0.5262 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001035/0.02832, allocations: 43.66 kB / 0.6801 GB, free: 16.07 MB / 0.5262 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0002192/0.02854, allocations: 38.36 kB / 0.6802 GB, free: 16.07 MB / 0.5262 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0001479/0.02869, allocations: 86.25 kB / 0.6802 GB, free: 16.05 MB / 0.5262 GB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 3.709e-05/0.02873, allocations: 36.58 kB / 0.6803 GB, free: 16.04 MB / 0.5262 GB Notification: Performance of sorting global known variables: time 0.0002446/0.02897, allocations: 341.1 kB / 0.6806 GB, free: 15.87 MB / 0.5262 GB Notification: Performance of sort global known variables: time 8e-08/0.02897, allocations: 0 / 0.6806 GB, free: 15.87 MB / 0.5262 GB Notification: Performance of remove unused functions: time 0.0004899/0.02946, allocations: 259.8 kB / 0.6808 GB, free: 15.84 MB / 0.5262 GB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 1 * Number of states: 21 (remdesivir.central.C,remdesivir.central.AUC,remdesivir.elim.MExc,remdesivir.periodicDose.TotalCumulativeMass,remdesivir.periodicDose.variableDose.TotalCumulativeMass,remdesivir.peripheral.C,remdesivir.peripheral.AUC,GS_704277.central.C,GS_704277.central.AUC,GS_704277.elim.MExc,GS_704277.periodicDose.TotalCumulativeMass,GS_704277.periodicDose.variableDose.TotalCumulativeMass,GS_704277.peripheral.C,GS_704277.peripheral.AUC,GS_441524.central.C,GS_441524.central.AUC,GS_441524.elim.MExc,GS_441524.periodicDose.TotalCumulativeMass,GS_441524.periodicDose.variableDose.TotalCumulativeMass,GS_441524.peripheral.C,GS_441524.peripheral.AUC) * Number of discrete variables: 39 ($whenCondition15,$whenCondition14,$whenCondition13,$whenCondition1,$whenCondition2,$whenCondition3,$whenCondition4,$whenCondition5,$whenCondition6,$whenCondition7,$whenCondition8,$whenCondition9,$whenCondition10,$whenCondition11,$whenCondition12,remdesivir.central.Cmax,remdesivir.central.Cmin,remdesivir.central.rising,remdesivir.periodicDose.pulse.T_start,remdesivir.periodicDose.pulse.count,remdesivir.peripheral.Cmax,remdesivir.peripheral.Cmin,remdesivir.peripheral.rising,GS_704277.central.Cmax,GS_704277.central.Cmin,GS_704277.central.rising,GS_704277.periodicDose.pulse.T_start,GS_704277.periodicDose.pulse.count,GS_704277.peripheral.Cmax,GS_704277.peripheral.Cmin,GS_704277.peripheral.rising,GS_441524.central.Cmax,GS_441524.central.Cmin,GS_441524.central.rising,GS_441524.periodicDose.pulse.T_start,GS_441524.periodicDose.pulse.count,GS_441524.peripheral.Cmax,GS_441524.peripheral.Cmin,GS_441524.peripheral.rising) * Number of discrete states: 33 (remdesivir.periodicDose.pulse.count,GS_704277.periodicDose.pulse.count,GS_441524.periodicDose.pulse.count,GS_441524.peripheral.Cmin,$whenCondition12,GS_441524.peripheral.Cmax,$whenCondition11,GS_441524.peripheral.rising,GS_441524.central.Cmin,$whenCondition10,GS_441524.central.Cmax,$whenCondition9,GS_441524.central.rising,GS_704277.peripheral.Cmin,$whenCondition8,GS_704277.peripheral.Cmax,$whenCondition7,GS_704277.peripheral.rising,GS_704277.central.Cmin,$whenCondition6,GS_704277.central.Cmax,$whenCondition5,GS_704277.central.rising,remdesivir.peripheral.Cmin,$whenCondition4,remdesivir.peripheral.Cmax,$whenCondition3,remdesivir.peripheral.rising,remdesivir.central.Cmin,$whenCondition2,remdesivir.central.Cmax,$whenCondition1,remdesivir.central.rising) * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (87): * Single equations (assignments): 75 * Array equations: 0 * Algorithm blocks: 6 * Record equations: 0 * When equations: 6 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of Backend phase and start with SimCode phase: time 0.0001549/0.02962, allocations: 192.4 kB / 0.681 GB, free: 15.71 MB / 0.5262 GB Notification: Performance of simCode: created initialization part: time 0.0009395/0.03056, allocations: 1.505 MB / 0.6825 GB, free: 14.53 MB / 0.5262 GB Notification: Performance of simCode: created event and clocks part: time 2.044e-06/0.03056, allocations: 0 / 0.6825 GB, free: 14.53 MB / 0.5262 GB Notification: Performance of simCode: created simulation system equations: time 0.0004391/0.031, allocations: 0.8192 MB / 0.6833 GB, free: 13.87 MB / 0.5262 GB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0007164/0.03171, allocations: 260.8 kB / 0.6835 GB, free: 13.8 MB / 0.5262 GB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.003183/0.0349, allocations: 2.359 MB / 0.6858 GB, free: 12.32 MB / 0.5262 GB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0001242/0.03502, allocations: 173.8 kB / 0.686 GB, free: 12.24 MB / 0.5262 GB Notification: Performance of simCode: alias equations: time 0.000302/0.03532, allocations: 92.88 kB / 0.6861 GB, free: 12.22 MB / 0.5262 GB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0001321/0.03545, allocations: 65.78 kB / 0.6862 GB, free: 12.21 MB / 0.5262 GB Notification: Performance of SimCode: time 1.103e-06/0.03546, allocations: 0 / 0.6862 GB, free: 12.21 MB / 0.5262 GB Notification: Performance of Templates: time 0.01535/0.0508, allocations: 13.43 MB / 0.6993 GB, free: 3.129 MB / 0.5262 GB " [Timeout remaining time 660] make -j1 -f Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites.makefile [Timeout 660] (rm -f Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites.pipe ; mkfifo Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites.pipe ; head -c 1048576 < Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites.pipe >> ../files/Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites.sim & ./Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites -abortSlowSimulation -alarm=240 -lv LOG_STATS > Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites.pipe 2>&1) [Timeout 240] [Calling sys.exit(0), Time elapsed: 7.826202346011996]