Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001105/0.001105, allocations: 92.2 kB / 20.19 MB, free: 4.363 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001212/0.001212, allocations: 177 kB / 23.49 MB, free: 1.059 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9633/0.9633, allocations: 177.1 MB / 203.8 MB, free: 5.617 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.1011/0.1011, allocations: 17.46 MB / 277.7 MB, free: 11.61 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57")
translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.714e-06/1.714e-06, allocations: 0 / 353.6 MB, free: 10.17 MB / 282.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 2.84e-05/3.012e-05, allocations: 6.312 kB / 353.6 MB, free: 10.16 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14335:7-14335:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14335:7-14335:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.Joels57): time 0.2225/0.2226, allocations: 85.31 MB / 438.9 MB, free: 10.12 MB / 330.7 MB
Notification: Performance of NFInst.instExpressions: time 0.3834/0.6059, allocations: 220.2 MB / 0.6437 GB, free: 2.875 MB / 442.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.01311/0.619, allocations: 229.9 kB / 0.6439 GB, free: 2.875 MB / 442.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.01316/0.6322, allocations: 4.506 MB / 0.6483 GB, free: 1.352 MB / 442.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.04728/0.6795, allocations: 18.52 MB / 0.6664 GB, free: 8.918 MB / 458.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.06966/0.7491, allocations: 33.51 MB / 0.6991 GB, free: 2.965 MB / 474.7 MB
Notification: Performance of NFFlatten.flatten: time 0.5364/1.286, allocations: 91.37 MB / 0.7883 GB, free: 6.566 MB / 0.5105 GB
Notification: Performance of NFFlatten.resolveConnections: time 0.0701/1.356, allocations: 54.61 MB / 0.8416 GB, free: 13.22 MB / 0.5262 GB
Notification: Performance of NFEvalConstants.evaluate: time 0.1478/1.503, allocations: 77.94 MB / 0.9178 GB, free: 7.855 MB / 0.5574 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.09275/1.596, allocations: 51.33 MB / 0.9679 GB, free: 8.227 MB / 0.6043 GB
Notification: Performance of NFPackage.collectConstants: time 0.5563/2.152, allocations: 12.2 MB / 0.9798 GB, free: 57.05 MB / 0.6044 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.09707/2.249, allocations: 34.09 MB / 1.013 GB, free: 57.05 MB / 0.6044 GB
Notification: Performance of NFScalarize.scalarize: time 0.04074/2.29, allocations: 24.28 MB / 1.037 GB, free: 57.05 MB / 0.6044 GB
Notification: Performance of NFVerifyModel.verify: time 0.06231/2.352, allocations: 31.12 MB / 1.067 GB, free: 57.05 MB / 0.6044 GB
Notification: Performance of NFConvertDAE.convert: time 0.1812/2.534, allocations: 108.5 MB / 1.173 GB, free: 11.94 MB / 0.62 GB
Notification: Performance of FrontEnd - DAE generated: time 5.871e-06/2.534, allocations: 0 / 1.173 GB, free: 11.94 MB / 0.62 GB
Notification: Performance of FrontEnd: time 1.543e-06/2.534, allocations: 0 / 1.173 GB, free: 11.94 MB / 0.62 GB
Notification: Performance of Transformations before backend: time 0.002788/2.536, allocations: 0 / 1.173 GB, free: 11.94 MB / 0.62 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 11424
 * Number of variables: 11424
Notification: Performance of Generate backend data structure: time 0.5106/3.047, allocations: 73.76 MB / 1.245 GB, free: 238.1 MB / 0.6515 GB
Notification: Performance of prepare preOptimizeDAE: time 4.659e-05/3.047, allocations: 7.938 kB / 1.245 GB, free: 238.1 MB / 0.6515 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.08116/3.128, allocations: 19.72 MB / 1.264 GB, free: 232.4 MB / 0.6515 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.06731/3.196, allocations: 38.09 MB / 1.302 GB, free: 216 MB / 0.6515 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.005075/3.201, allocations: 9.209 MB / 1.311 GB, free: 207.6 MB / 0.6515 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.02311/3.224, allocations: 4.568 MB / 1.315 GB, free: 205.4 MB / 0.6515 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.2153/3.439, allocations: 58.04 MB / 1.372 GB, free: 151.3 MB / 0.6515 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.001741/3.441, allocations: 27.94 kB / 1.372 GB, free: 151.3 MB / 0.6515 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.02036/3.461, allocations: 1.76 MB / 1.374 GB, free: 149.6 MB / 0.6515 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0004527/3.462, allocations: 1.062 MB / 1.375 GB, free: 148.5 MB / 0.6515 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.1525/3.614, allocations: 61.5 MB / 1.435 GB, free: 86.93 MB / 0.6515 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.7463/4.361, allocations: 281.5 MB / 1.71 GB, free: 82.09 MB / 0.6515 GB
Notification: Performance of preOpt comSubExp (simulation): time 2.338/6.699, allocations: 0.9234 GB / 2.633 GB, free: 197 MB / 0.6515 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.05731/6.756, allocations: 23.24 MB / 2.656 GB, free: 196.5 MB / 0.6515 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.3345/7.091, allocations: 166.2 MB / 2.818 GB, free: 85.04 MB / 0.6515 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0001647/7.091, allocations: 336.8 kB / 2.818 GB, free: 84.7 MB / 0.6515 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.05297/7.144, allocations: 27.7 MB / 2.845 GB, free: 58.3 MB / 0.6515 GB
Notification: Performance of pre-optimization done (n=2985): time 0.0001312/7.144, allocations: 0 / 2.845 GB, free: 58.3 MB / 0.6515 GB
Notification: Performance of matching and sorting (n=3387): time 1.366/8.51, allocations: 235.1 MB / 3.075 GB, free: 92.45 MB / 0.6515 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0002589/8.51, allocations: 449.3 kB / 3.075 GB, free: 91.97 MB / 0.6515 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.05337/8.563, allocations: 26.16 MB / 3.101 GB, free: 66.55 MB / 0.6515 GB
Notification: Performance of collectPreVariables (initialization): time 0.01353/8.577, allocations: 0.572 MB / 3.101 GB, free: 65.98 MB / 0.6515 GB
Notification: Performance of collectInitialEqns (initialization): time 0.01545/8.592, allocations: 23.29 MB / 3.124 GB, free: 45.35 MB / 0.6515 GB
Notification: Performance of collectInitialBindings (initialization): time 0.02529/8.618, allocations: 15.04 MB / 3.139 GB, free: 31.89 MB / 0.6515 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.337/8.955, allocations: 10.54 MB / 3.149 GB, free: 153.8 MB / 0.6515 GB
Notification: Performance of setup shared object (initialization): time 6.87e-05/8.955, allocations: 481.2 kB / 3.15 GB, free: 153.3 MB / 0.6515 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.04115/8.996, allocations: 11.75 MB / 3.161 GB, free: 153.2 MB / 0.6515 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.05163/9.047, allocations: 32.73 MB / 3.193 GB, free: 128.8 MB / 0.6515 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.08933/9.137, allocations: 48.81 MB / 3.241 GB, free: 102.5 MB / 0.6515 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0007309/9.138, allocations: 126.4 kB / 3.241 GB, free: 102.5 MB / 0.6515 GB
Notification: Performance of matching and sorting (n=5667) (initialization): time 0.7005/9.838, allocations: 135.8 MB / 3.373 GB, free: 28.96 MB / 0.6515 GB
Notification: Performance of prepare postOptimizeDAE: time 0.0003854/9.838, allocations: 196 kB / 3.374 GB, free: 28.77 MB / 0.6515 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0005718/9.839, allocations: 444 kB / 3.374 GB, free: 28.34 MB / 0.6515 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.582/10.42, allocations: 158.9 MB / 3.529 GB, free: 81.74 MB / 0.6515 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.04024/10.46, allocations: 11.25 MB / 3.54 GB, free: 79.58 MB / 0.6515 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.5191/10.98, allocations: 88.04 MB / 3.626 GB, free: 96.43 MB / 0.6515 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.04384/11.02, allocations: 2.499 MB / 3.629 GB, free: 96.43 MB / 0.6515 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.01505/11.04, allocations: 2.797 MB / 3.631 GB, free: 96.43 MB / 0.6515 GB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 2031
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (5523):
 * Single equations (assignments): 5514
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.03674/11.08, allocations: 2.947 MB / 3.634 GB, free: 95.98 MB / 0.6515 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.02782/11.1, allocations: 4.203 MB / 3.638 GB, free: 95.98 MB / 0.6515 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.442/11.55, allocations: 91.78 MB / 3.728 GB, free: 93.71 MB / 0.6515 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0003497/11.55, allocations: 360.9 kB / 3.728 GB, free: 93.71 MB / 0.6515 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0004815/11.55, allocations: 56.75 kB / 3.728 GB, free: 93.71 MB / 0.6515 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.001085/11.55, allocations: 178.8 kB / 3.728 GB, free: 93.71 MB / 0.6515 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.8511/12.4, allocations: 147.7 MB / 3.873 GB, free: 99.73 MB / 0.6515 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0003677/12.4, allocations: 9.906 kB / 3.873 GB, free: 99.73 MB / 0.6515 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.03708/12.44, allocations: 7.323 MB / 3.88 GB, free: 99.45 MB / 0.6515 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.1618/12.6, allocations: 53.04 MB / 3.932 GB, free: 97.43 MB / 0.6515 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.01048/12.61, allocations: 1.428 MB / 3.933 GB, free: 97.43 MB / 0.6515 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.1835/12.79, allocations: 49.29 MB / 3.981 GB, free: 79.29 MB / 0.6515 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.166e-05/12.79, allocations: 20.44 kB / 3.981 GB, free: 79.28 MB / 0.6515 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.7531/13.55, allocations: 104.8 MB / 4.084 GB, free: 88.78 MB / 0.6515 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.02942/13.57, allocations: 9.862 MB / 4.093 GB, free: 88.78 MB / 0.6515 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.01398/13.59, allocations: 0.8945 MB / 4.094 GB, free: 88.78 MB / 0.6515 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.02837/13.62, allocations: 1.572 MB / 4.096 GB, free: 88.78 MB / 0.6515 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.01862/13.64, allocations: 5.155 MB / 4.101 GB, free: 88.74 MB / 0.6515 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.007743/13.64, allocations: 1.384 MB / 4.102 GB, free: 88.74 MB / 0.6515 GB
Notification: Performance of sorting global known variables: time 0.02268/13.67, allocations: 14.84 MB / 4.116 GB, free: 87.79 MB / 0.6515 GB
Notification: Performance of sort global known variables: time 2.21e-07/13.67, allocations: 0 / 4.116 GB, free: 87.79 MB / 0.6515 GB
Notification: Performance of remove unused functions: time 0.06516/13.73, allocations: 19.75 MB / 4.136 GB, free: 87.79 MB / 0.6515 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 45
 * Number of states: 180 (pCO2_2000.solution.temperature,pCO2_2000.O2_free.logn,pCO2_2000.H2O.logn,pCO2_2000.relaxed.OxyHm[1].logn,pCO2_2000.relaxed.OxyHm[2].logn,pCO2_2000.relaxed.OxyHm[3].logn,pCO2_2000.relaxed.OxyHm[4].logn,pCO2_2000.relaxed.DeoxyHm[1].logn,pCO2_2000.relaxed.DeoxyHm[2].logn,pCO2_2000.relaxed.DeoxyHm[3].logn,pCO2_2000.relaxed.DeoxyHm[4].logn,pCO2_2000.relaxed.HmAH[1].logn,pCO2_2000.relaxed.HmAH[2].logn,pCO2_2000.relaxed.HmAH[3].logn,pCO2_2000.relaxed.HmAH[4].logn,pCO2_2000.relaxed.HmA[1].logn,pCO2_2000.relaxed.HmA[2].logn,pCO2_2000.relaxed.HmA[3].logn,pCO2_2000.relaxed.HmA[4].logn,pCO2_2000.relaxed.HmNH3[1].logn,pCO2_2000.relaxed.HmNH3[2].logn,pCO2_2000.relaxed.HmNH3[3].logn,pCO2_2000.relaxed.HmNH3[4].logn,pCO2_2000.relaxed.HmNH2[1].logn,pCO2_2000.relaxed.HmNH2[2].logn,pCO2_2000.relaxed.HmNH2[3].logn,pCO2_2000.relaxed.HmNH2[4].logn,pCO2_2000.relaxed.HmNHCOO[1].logn,pCO2_2000.relaxed.HmNHCOO[2].logn,pCO2_2000.relaxed.HmNHCOO[3].logn,pCO2_2000.relaxed.HmNHCOO[4].logn,pCO2_2000.tensed.OxyHm[1].logn,pCO2_2000.tensed.OxyHm[2].logn,pCO2_2000.tensed.OxyHm[3].logn,pCO2_2000.tensed.OxyHm[4].logn,pCO2_2000.tensed.DeoxyHm[1].logn,pCO2_2000.tensed.DeoxyHm[2].logn,pCO2_2000.tensed.DeoxyHm[3].logn,pCO2_2000.tensed.DeoxyHm[4].logn,pCO2_2000.tensed.HmAH[1].logn,pCO2_2000.tensed.HmAH[2].logn,pCO2_2000.tensed.HmAH[3].logn,pCO2_2000.tensed.HmAH[4].logn,pCO2_2000.tensed.HmA[1].logn,pCO2_2000.tensed.HmA[2].logn,pCO2_2000.tensed.HmA[3].logn,pCO2_2000.tensed.HmA[4].logn,pCO2_2000.tensed.HmNH3[1].logn,pCO2_2000.tensed.HmNH3[2].logn,pCO2_2000.tensed.HmNH3[3].logn,pCO2_2000.tensed.HmNH3[4].logn,pCO2_2000.tensed.HmNH2[1].logn,pCO2_2000.tensed.HmNH2[2].logn,pCO2_2000.tensed.HmNH2[3].logn,pCO2_2000.tensed.HmNH2[4].logn,pCO2_2000.tensed.HmNHCOO[1].logn,pCO2_2000.tensed.HmNHCOO[2].logn,pCO2_2000.tensed.HmNHCOO[3].logn,pCO2_2000.tensed.HmNHCOO[4].logn,pCO2_2000.CO2_free.logn,pCO2_5330.solution.temperature,pCO2_5330.O2_free.logn,pCO2_5330.H2O.logn,pCO2_5330.relaxed.OxyHm[1].logn,pCO2_5330.relaxed.OxyHm[2].logn,pCO2_5330.relaxed.OxyHm[3].logn,pCO2_5330.relaxed.OxyHm[4].logn,pCO2_5330.relaxed.DeoxyHm[1].logn,pCO2_5330.relaxed.DeoxyHm[2].logn,pCO2_5330.relaxed.DeoxyHm[3].logn,pCO2_5330.relaxed.DeoxyHm[4].logn,pCO2_5330.relaxed.HmAH[1].logn,pCO2_5330.relaxed.HmAH[2].logn,pCO2_5330.relaxed.HmAH[3].logn,pCO2_5330.relaxed.HmAH[4].logn,pCO2_5330.relaxed.HmA[1].logn,pCO2_5330.relaxed.HmA[2].logn,pCO2_5330.relaxed.HmA[3].logn,pCO2_5330.relaxed.HmA[4].logn,pCO2_5330.relaxed.HmNH3[1].logn,pCO2_5330.relaxed.HmNH3[2].logn,pCO2_5330.relaxed.HmNH3[3].logn,pCO2_5330.relaxed.HmNH3[4].logn,pCO2_5330.relaxed.HmNH2[1].logn,pCO2_5330.relaxed.HmNH2[2].logn,pCO2_5330.relaxed.HmNH2[3].logn,pCO2_5330.relaxed.HmNH2[4].logn,pCO2_5330.relaxed.HmNHCOO[1].logn,pCO2_5330.relaxed.HmNHCOO[2].logn,pCO2_5330.relaxed.HmNHCOO[3].logn,pCO2_5330.relaxed.HmNHCOO[4].logn,pCO2_5330.tensed.OxyHm[1].logn,pCO2_5330.tensed.OxyHm[2].logn,pCO2_5330.tensed.OxyHm[3].logn,pCO2_5330.tensed.OxyHm[4].logn,pCO2_5330.tensed.DeoxyHm[1].logn,pCO2_5330.tensed.DeoxyHm[2].logn,pCO2_5330.tensed.DeoxyHm[3].logn,pCO2_5330.tensed.DeoxyHm[4].logn,pCO2_5330.tensed.HmAH[1].logn,pCO2_5330.tensed.HmAH[2].logn,pCO2_5330.tensed.HmAH[3].logn,pCO2_5330.tensed.HmAH[4].logn,pCO2_5330.tensed.HmA[1].logn,pCO2_5330.tensed.HmA[2].logn,pCO2_5330.tensed.HmA[3].logn,pCO2_5330.tensed.HmA[4].logn,pCO2_5330.tensed.HmNH3[1].logn,pCO2_5330.tensed.HmNH3[2].logn,pCO2_5330.tensed.HmNH3[3].logn,pCO2_5330.tensed.HmNH3[4].logn,pCO2_5330.tensed.HmNH2[1].logn,pCO2_5330.tensed.HmNH2[2].logn,pCO2_5330.tensed.HmNH2[3].logn,pCO2_5330.tensed.HmNH2[4].logn,pCO2_5330.tensed.HmNHCOO[1].logn,pCO2_5330.tensed.HmNHCOO[2].logn,pCO2_5330.tensed.HmNHCOO[3].logn,pCO2_5330.tensed.HmNHCOO[4].logn,pCO2_5330.CO2_free.logn,pCO2_9330.solution.temperature,pCO2_9330.O2_free.logn,pCO2_9330.H2O.logn,pCO2_9330.relaxed.OxyHm[1].logn,pCO2_9330.relaxed.OxyHm[2].logn,pCO2_9330.relaxed.OxyHm[3].logn,pCO2_9330.relaxed.OxyHm[4].logn,pCO2_9330.relaxed.DeoxyHm[1].logn,pCO2_9330.relaxed.DeoxyHm[2].logn,pCO2_9330.relaxed.DeoxyHm[3].logn,pCO2_9330.relaxed.DeoxyHm[4].logn,pCO2_9330.relaxed.HmAH[1].logn,pCO2_9330.relaxed.HmAH[2].logn,pCO2_9330.relaxed.HmAH[3].logn,pCO2_9330.relaxed.HmAH[4].logn,pCO2_9330.relaxed.HmA[1].logn,pCO2_9330.relaxed.HmA[2].logn,pCO2_9330.relaxed.HmA[3].logn,pCO2_9330.relaxed.HmA[4].logn,pCO2_9330.relaxed.HmNH3[1].logn,pCO2_9330.relaxed.HmNH3[2].logn,pCO2_9330.relaxed.HmNH3[3].logn,pCO2_9330.relaxed.HmNH3[4].logn,pCO2_9330.relaxed.HmNH2[1].logn,pCO2_9330.relaxed.HmNH2[2].logn,pCO2_9330.relaxed.HmNH2[3].logn,pCO2_9330.relaxed.HmNH2[4].logn,pCO2_9330.relaxed.HmNHCOO[1].logn,pCO2_9330.relaxed.HmNHCOO[2].logn,pCO2_9330.relaxed.HmNHCOO[3].logn,pCO2_9330.relaxed.HmNHCOO[4].logn,pCO2_9330.tensed.OxyHm[1].logn,pCO2_9330.tensed.OxyHm[2].logn,pCO2_9330.tensed.OxyHm[3].logn,pCO2_9330.tensed.OxyHm[4].logn,pCO2_9330.tensed.DeoxyHm[1].logn,pCO2_9330.tensed.DeoxyHm[2].logn,pCO2_9330.tensed.DeoxyHm[3].logn,pCO2_9330.tensed.DeoxyHm[4].logn,pCO2_9330.tensed.HmAH[1].logn,pCO2_9330.tensed.HmAH[2].logn,pCO2_9330.tensed.HmAH[3].logn,pCO2_9330.tensed.HmAH[4].logn,pCO2_9330.tensed.HmA[1].logn,pCO2_9330.tensed.HmA[2].logn,pCO2_9330.tensed.HmA[3].logn,pCO2_9330.tensed.HmA[4].logn,pCO2_9330.tensed.HmNH3[1].logn,pCO2_9330.tensed.HmNH3[2].logn,pCO2_9330.tensed.HmNH3[3].logn,pCO2_9330.tensed.HmNH3[4].logn,pCO2_9330.tensed.HmNH2[1].logn,pCO2_9330.tensed.HmNH2[2].logn,pCO2_9330.tensed.HmNH2[3].logn,pCO2_9330.tensed.HmNH2[4].logn,pCO2_9330.tensed.HmNHCOO[1].logn,pCO2_9330.tensed.HmNHCOO[2].logn,pCO2_9330.tensed.HmNHCOO[3].logn,pCO2_9330.tensed.HmNHCOO[4].logn,pCO2_9330.CO2_free.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (3702):
 * Single equations (assignments): 3693
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.02767/13.76, allocations: 11.23 MB / 4.147 GB, free: 87.46 MB / 0.6515 GB
Notification: Performance of simCode: created initialization part: time 0.1208/13.88, allocations: 42.47 MB / 4.188 GB, free: 82.17 MB / 0.6515 GB
Notification: Performance of simCode: created event and clocks part: time 1.641e-05/13.88, allocations: 3.969 kB / 4.188 GB, free: 82.17 MB / 0.6515 GB
Notification: Performance of simCode: created simulation system equations: time 0.06786/13.95, allocations: 23.02 MB / 4.211 GB, free: 66.12 MB / 0.6515 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.05622/14, allocations: 8.229 MB / 4.219 GB, free: 59.93 MB / 0.6515 GB
Error: Error parsing unit kDa: Unit not found
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.4409/14.44, allocations: 92.98 MB / 4.309 GB, free: 135 MB / 0.6671 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.02178/14.47, allocations: 13.92 MB / 4.323 GB, free: 133.7 MB / 0.6671 GB
Notification: Performance of simCode: alias equations: time 0.03613/14.5, allocations: 12.45 MB / 4.335 GB, free: 133.2 MB / 0.6671 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.01273/14.52, allocations: 3.87 MB / 4.339 GB, free: 133.1 MB / 0.6671 GB
Notification: Performance of SimCode: time 1.903e-06/14.52, allocations: 0 / 4.339 GB, free: 133.1 MB / 0.6671 GB
Notification: Performance of Templates: time 2.313/16.83, allocations: 1.028 GB / 5.367 GB, free: 101.1 MB / 0.6671 GB
"
[Timeout remaining time 643]
make -j1 -f Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.makefile [Timeout 660]
(rm -f Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; mkfifo Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; head -c 1048576 < Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe >> ../files/Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.sim & ./Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57 -abortSlowSimulation -alarm=240  -lv LOG_STATS > Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 43.52433602209203]