Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001514/0.001514, allocations: 92.2 kB / 20.19 MB, free: 4.352 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001849/0.001849, allocations: 173 kB / 23.49 MB, free: 1.051 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.073/1.073, allocations: 177.1 MB / 203.8 MB, free: 5.629 MB / 186.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.09563/0.09563, allocations: 17.45 MB / 277.7 MB, free: 11.62 MB / 266.7 MB " [Timeout remaining time 180] Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation") translateModel(Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation") [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 1.713e-06/1.713e-06, allocations: 0 / 353.6 MB, free: 10.13 MB / 282.7 MB Notification: Performance of FrontEnd - Absyn->SCode: time 2.226e-05/2.398e-05, allocations: 6.25 kB / 353.6 MB, free: 10.12 MB / 282.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14335:7-14335:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14335:7-14335:66:writable] Notification: The diagnostics message for the missing inner is: Your model is using an outer \"system\" component but an inner \"system\" component is not defined. For simulation drag Modelica.Fluid.System into your model to specify system properties. Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation): time 0.03862/0.03864, allocations: 45.53 MB / 399.1 MB, free: 12.67 MB / 330.7 MB Notification: Performance of NFInst.instExpressions: time 0.2167/0.2554, allocations: 73.65 MB / 472.8 MB, free: 2.664 MB / 330.7 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.003944/0.2593, allocations: 79.38 kB / 472.9 MB, free: 2.586 MB / 330.7 MB Notification: Performance of NFTyping.typeComponents: time 0.004078/0.2634, allocations: 1.504 MB / 474.4 MB, free: 1.078 MB / 330.7 MB Notification: Performance of NFTyping.typeBindings: time 0.01678/0.2802, allocations: 6.204 MB / 480.6 MB, free: 10.91 MB / 346.7 MB Notification: Performance of NFTyping.typeClassSections: time 0.02335/0.3035, allocations: 10.68 MB / 491.2 MB, free: 276 kB / 346.7 MB Notification: Performance of NFFlatten.flatten: time 0.02148/0.325, allocations: 27.43 MB / 0.5065 GB, free: 4.75 MB / 378.7 MB Notification: Performance of NFFlatten.resolveConnections: time 0.0199/0.3449, allocations: 17.1 MB / 0.5232 GB, free: 3.551 MB / 394.7 MB Notification: Performance of NFEvalConstants.evaluate: time 0.0455/0.3904, allocations: 23.17 MB / 0.5458 GB, free: 12.35 MB / 426.7 MB Notification: Performance of NFSimplifyModel.simplify: time 0.366/0.7564, allocations: 16.54 MB / 0.562 GB, free: 32.2 MB / 426.8 MB Notification: Performance of NFPackage.collectConstants: time 0.01238/0.7688, allocations: 3.131 MB / 0.5651 GB, free: 32.2 MB / 426.8 MB Notification: Performance of NFFlatten.collectFunctions: time 0.0323/0.8011, allocations: 10.39 MB / 0.5752 GB, free: 32.2 MB / 426.8 MB Notification: Performance of NFScalarize.scalarize: time 0.01333/0.8144, allocations: 7.159 MB / 0.5822 GB, free: 32.2 MB / 426.8 MB Notification: Performance of NFVerifyModel.verify: time 0.02366/0.8381, allocations: 9.41 MB / 0.5914 GB, free: 32.2 MB / 426.8 MB Notification: Performance of NFConvertDAE.convert: time 0.06202/0.9001, allocations: 33.77 MB / 0.6244 GB, free: 24.24 MB / 426.8 MB Notification: Performance of FrontEnd - DAE generated: time 5.821e-06/0.9001, allocations: 2.406 kB / 0.6244 GB, free: 24.24 MB / 426.8 MB Notification: Performance of FrontEnd: time 2.474e-06/0.9001, allocations: 9.328 kB / 0.6244 GB, free: 24.24 MB / 426.8 MB Notification: Performance of Transformations before backend: time 0.001132/0.9012, allocations: 0 / 0.6244 GB, free: 24.24 MB / 426.8 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 3808 * Number of variables: 3808 Notification: Performance of Generate backend data structure: time 0.06537/0.9666, allocations: 24.42 MB / 0.6482 GB, free: 5.652 MB / 426.8 MB Notification: Performance of prepare preOptimizeDAE: time 6.995e-05/0.9667, allocations: 8.031 kB / 0.6482 GB, free: 5.645 MB / 426.8 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.03172/0.9984, allocations: 6.564 MB / 0.6546 GB, free: 15.06 MB / 442.8 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.02576/1.024, allocations: 11.1 MB / 0.6655 GB, free: 4.422 MB / 442.8 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.002081/1.026, allocations: 3.06 MB / 0.6685 GB, free: 0.918 MB / 442.8 MB Notification: Performance of preOpt expandDerOperator (simulation): time 0.00917/1.035, allocations: 1.519 MB / 0.6699 GB, free: 15.39 MB / 458.8 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.06478/1.1, allocations: 19.37 MB / 0.6889 GB, free: 11.74 MB / 474.8 MB Notification: Performance of preOpt findStateOrder (simulation): time 0.0005774/1.101, allocations: 10.47 kB / 0.6889 GB, free: 11.74 MB / 474.8 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.007709/1.108, allocations: 0.5863 MB / 0.6894 GB, free: 11.15 MB / 474.8 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0002331/1.109, allocations: 367.9 kB / 0.6898 GB, free: 10.79 MB / 474.8 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.06117/1.17, allocations: 20.5 MB / 0.7098 GB, free: 6.32 MB / 490.8 MB Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts. Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.3277/1.498, allocations: 86.16 MB / 0.7939 GB, free: 154 MB / 0.5105 GB Notification: Performance of preOpt comSubExp (simulation): time 0.5734/2.071, allocations: 315 MB / 1.102 GB, free: 108.7 MB / 0.5105 GB Notification: Performance of preOpt resolveLoops (simulation): time 0.01805/2.089, allocations: 7.749 MB / 1.109 GB, free: 100.9 MB / 0.5105 GB Notification: Performance of preOpt evalFunc (simulation): time 0.09371/2.183, allocations: 51.02 MB / 1.159 GB, free: 51.55 MB / 0.5105 GB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0001007/2.183, allocations: 141.1 kB / 1.159 GB, free: 51.4 MB / 0.5105 GB Notification: Performance of preOpt simplifyInStream (simulation): time 0.02028/2.203, allocations: 6.035 MB / 1.165 GB, free: 46 MB / 0.5105 GB Notification: Performance of pre-optimization done (n=995): time 5.352e-05/2.203, allocations: 0 / 1.165 GB, free: 46 MB / 0.5105 GB Notification: Performance of matching and sorting (n=1129): time 0.5561/2.759, allocations: 78.81 MB / 1.242 GB, free: 177.9 MB / 0.5105 GB Notification: Performance of inlineWhenForInitialization (initialization): time 8.969e-05/2.759, allocations: 166 kB / 1.242 GB, free: 177.8 MB / 0.5105 GB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.01047/2.77, allocations: 8.776 MB / 1.251 GB, free: 174 MB / 0.5105 GB Notification: Performance of collectPreVariables (initialization): time 0.004077/2.774, allocations: 210.6 kB / 1.251 GB, free: 173.9 MB / 0.5105 GB Notification: Performance of collectInitialEqns (initialization): time 0.004245/2.778, allocations: 7.705 MB / 1.258 GB, free: 168.2 MB / 0.5105 GB Notification: Performance of collectInitialBindings (initialization): time 0.00578/2.784, allocations: 4.305 MB / 1.263 GB, free: 164.6 MB / 0.5105 GB Notification: Performance of simplifyInitialFunctions (initialization): time 0.006746/2.791, allocations: 3.448 MB / 1.266 GB, free: 162.6 MB / 0.5105 GB Notification: Performance of setup shared object (initialization): time 4.758e-05/2.791, allocations: 488.4 kB / 1.266 GB, free: 162.1 MB / 0.5105 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.007222/2.798, allocations: 3.917 MB / 1.27 GB, free: 161 MB / 0.5105 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.009344/2.807, allocations: 10.91 MB / 1.281 GB, free: 148.8 MB / 0.5105 GB Notification: Performance of analyzeInitialSystem (initialization): time 0.02253/2.83, allocations: 16.27 MB / 1.297 GB, free: 129.6 MB / 0.5105 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0001932/2.83, allocations: 40 kB / 1.297 GB, free: 129.5 MB / 0.5105 GB Notification: Performance of matching and sorting (n=1889) (initialization): time 0.2843/3.114, allocations: 45.28 MB / 1.341 GB, free: 84.12 MB / 0.5105 GB Notification: Performance of prepare postOptimizeDAE: time 0.0001091/3.114, allocations: 68 kB / 1.341 GB, free: 84.05 MB / 0.5105 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0001455/3.115, allocations: 150.2 kB / 1.341 GB, free: 83.91 MB / 0.5105 GB Notification: Performance of postOpt tearingSystem (initialization): time 0.08481/3.199, allocations: 47.51 MB / 1.388 GB, free: 36.48 MB / 0.5105 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.01058/3.21, allocations: 3.752 MB / 1.391 GB, free: 32.72 MB / 0.5105 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.2778/3.488, allocations: 28.17 MB / 1.419 GB, free: 146.5 MB / 0.5105 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.01758/3.505, allocations: 0.8329 MB / 1.42 GB, free: 146.5 MB / 0.5105 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.006745/3.512, allocations: 0.9341 MB / 1.421 GB, free: 146.5 MB / 0.5105 GB Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 677 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (1841): * Single equations (assignments): 1838 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 3 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 2 systems {(1,3,100.0%), (33,10,82.4%)} * Non-linear torn systems (#iteration vars, #inner vars): 1 system {(1,3)} Notification: Performance of prepare postOptimizeDAE: time 0.01437/3.527, allocations: 1.083 MB / 1.422 GB, free: 146.3 MB / 0.5105 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.007263/3.534, allocations: 1.404 MB / 1.423 GB, free: 146.3 MB / 0.5105 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.1565/3.69, allocations: 30.61 MB / 1.453 GB, free: 145.7 MB / 0.5105 GB Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0001959/3.69, allocations: 122.1 kB / 1.453 GB, free: 145.7 MB / 0.5105 GB Notification: Performance of postOpt constantLinearSystem (simulation): time 7.501e-05/3.69, allocations: 19.66 kB / 1.453 GB, free: 145.7 MB / 0.5105 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.0004359/3.691, allocations: 59.95 kB / 1.453 GB, free: 145.7 MB / 0.5105 GB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.1721/3.863, allocations: 46.94 MB / 1.499 GB, free: 129.5 MB / 0.5105 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0001352/3.863, allocations: 4.25 kB / 1.499 GB, free: 129.5 MB / 0.5105 GB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.009289/3.872, allocations: 2.446 MB / 1.501 GB, free: 128.8 MB / 0.5105 GB Notification: Performance of postOpt tearingSystem (simulation): time 0.04928/3.922, allocations: 15.85 MB / 1.517 GB, free: 113.2 MB / 0.5105 GB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.004264/3.926, allocations: 463.5 kB / 1.517 GB, free: 112.7 MB / 0.5105 GB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.04743/3.973, allocations: 15.66 MB / 1.533 GB, free: 96.87 MB / 0.5105 GB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 4.178e-06/3.973, allocations: 7.938 kB / 1.533 GB, free: 96.86 MB / 0.5105 GB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.1407/4.114, allocations: 34.67 MB / 1.566 GB, free: 62.43 MB / 0.5105 GB Notification: Performance of postOpt removeConstants (simulation): time 0.0102/4.124, allocations: 2.889 MB / 1.569 GB, free: 59.55 MB / 0.5105 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.006223/4.131, allocations: 287.9 kB / 1.569 GB, free: 59.27 MB / 0.5105 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.01029/4.141, allocations: 0.5267 MB / 1.57 GB, free: 58.74 MB / 0.5105 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.006403/4.147, allocations: 1.706 MB / 1.572 GB, free: 57.03 MB / 0.5105 GB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.003211/4.15, allocations: 467.6 kB / 1.572 GB, free: 56.57 MB / 0.5105 GB Notification: Performance of sorting global known variables: time 0.007481/4.158, allocations: 4.272 MB / 1.576 GB, free: 52.34 MB / 0.5105 GB Notification: Performance of sort global known variables: time 1.81e-07/4.158, allocations: 0 / 1.576 GB, free: 52.34 MB / 0.5105 GB Notification: Performance of remove unused functions: time 0.02514/4.183, allocations: 6.563 MB / 1.583 GB, free: 46.3 MB / 0.5105 GB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 15 * Number of states: 60 (solution.temperature,O2_free.logn,H2O.logn,relaxed.OxyHm[1].logn,relaxed.OxyHm[2].logn,relaxed.OxyHm[3].logn,relaxed.OxyHm[4].logn,relaxed.DeoxyHm[1].logn,relaxed.DeoxyHm[2].logn,relaxed.DeoxyHm[3].logn,relaxed.DeoxyHm[4].logn,relaxed.HmAH[1].logn,relaxed.HmAH[2].logn,relaxed.HmAH[3].logn,relaxed.HmAH[4].logn,relaxed.HmA[1].logn,relaxed.HmA[2].logn,relaxed.HmA[3].logn,relaxed.HmA[4].logn,relaxed.HmNH3[1].logn,relaxed.HmNH3[2].logn,relaxed.HmNH3[3].logn,relaxed.HmNH3[4].logn,relaxed.HmNH2[1].logn,relaxed.HmNH2[2].logn,relaxed.HmNH2[3].logn,relaxed.HmNH2[4].logn,relaxed.HmNHCOO[1].logn,relaxed.HmNHCOO[2].logn,relaxed.HmNHCOO[3].logn,relaxed.HmNHCOO[4].logn,tensed.OxyHm[1].logn,tensed.OxyHm[2].logn,tensed.OxyHm[3].logn,tensed.OxyHm[4].logn,tensed.DeoxyHm[1].logn,tensed.DeoxyHm[2].logn,tensed.DeoxyHm[3].logn,tensed.DeoxyHm[4].logn,tensed.HmAH[1].logn,tensed.HmAH[2].logn,tensed.HmAH[3].logn,tensed.HmAH[4].logn,tensed.HmA[1].logn,tensed.HmA[2].logn,tensed.HmA[3].logn,tensed.HmA[4].logn,tensed.HmNH3[1].logn,tensed.HmNH3[2].logn,tensed.HmNH3[3].logn,tensed.HmNH3[4].logn,tensed.HmNH2[1].logn,tensed.HmNH2[2].logn,tensed.HmNH2[3].logn,tensed.HmNH2[4].logn,tensed.HmNHCOO[1].logn,tensed.HmNHCOO[2].logn,tensed.HmNHCOO[3].logn,tensed.HmNHCOO[4].logn,CO2_free.logn) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (1234): * Single equations (assignments): 1231 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 3 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 2 systems {(1,3,100.0%), (33,10,82.4%)} * Non-linear torn systems (#iteration vars, #inner vars): 1 system {(1,3)} Notification: Performance of Backend phase and start with SimCode phase: time 0.009292/4.192, allocations: 3.766 MB / 1.586 GB, free: 43.26 MB / 0.5105 GB Notification: Performance of simCode: created initialization part: time 0.04183/4.234, allocations: 14.1 MB / 1.6 GB, free: 29.09 MB / 0.5105 GB Notification: Performance of simCode: created event and clocks part: time 9.718e-06/4.234, allocations: 4 kB / 1.6 GB, free: 29.09 MB / 0.5105 GB Notification: Performance of simCode: created simulation system equations: time 0.02144/4.256, allocations: 7.638 MB / 1.608 GB, free: 21.4 MB / 0.5105 GB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0146/4.27, allocations: 2.646 MB / 1.61 GB, free: 18.97 MB / 0.5105 GB Error: Error parsing unit kDa: Unit not found Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.2191/4.489, allocations: 29.53 MB / 1.639 GB, free: 164.8 MB / 0.5105 GB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.00808/4.497, allocations: 4.369 MB / 1.643 GB, free: 164.3 MB / 0.5105 GB Notification: Performance of simCode: alias equations: time 0.01075/4.508, allocations: 4.167 MB / 1.647 GB, free: 164.2 MB / 0.5105 GB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.004037/4.512, allocations: 1.298 MB / 1.649 GB, free: 164.2 MB / 0.5105 GB Notification: Performance of SimCode: time 2.294e-06/4.512, allocations: 0 / 1.649 GB, free: 164.2 MB / 0.5105 GB Notification: Performance of Templates: time 0.4404/4.953, allocations: 329 MB / 1.97 GB, free: 75.47 MB / 0.5105 GB " [Timeout remaining time 655] make -j1 -f Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation.makefile [Timeout 660] (rm -f Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation.pipe ; mkfifo Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation.pipe ; head -c 1048576 < Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation.pipe >> ../files/Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation.sim & ./Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation -abortSlowSimulation -alarm=240 -lv LOG_STATS > Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation.pipe 2>&1) [Timeout 240] [Calling sys.exit(0), Time elapsed: 14.998045692918822]