Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Examples.debug.EnzymeKinetics2_.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001468/0.001468, allocations: 92.2 kB / 20.19 MB, free: 4.359 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001211/0.001211, allocations: 173 kB / 23.49 MB, free: 1.059 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.049/1.049, allocations: 177.1 MB / 203.8 MB, free: 5.602 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.1246/0.1246, allocations: 17.46 MB / 277.7 MB, free: 11.6 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Examples.debug.EnzymeKinetics2_,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.debug.EnzymeKinetics2_")
translateModel(Chemical.Examples.debug.EnzymeKinetics2_,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.debug.EnzymeKinetics2_") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.903e-06/1.903e-06, allocations: 0 / 353.6 MB, free: 10.18 MB / 282.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 3.122e-05/3.312e-05, allocations: 10.19 kB / 353.6 MB, free: 10.16 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1343:7-1343:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1343:7-1343:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1361:7-1361:76:writable] Warning: An inner declaration for outer component dropOfCommons could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1361:7-1361:76:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"dropOfCommons\" component but
an inner \"dropOfCommons\" component is not defined.
Use Chemical.DropOfCommons in your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Examples.debug.EnzymeKinetics2_): time 0.0353/0.03533, allocations: 35.98 MB / 389.5 MB, free: 6.309 MB / 314.7 MB
Notification: Performance of NFInst.instExpressions: time 0.01384/0.04918, allocations: 10.96 MB / 400.5 MB, free: 11.3 MB / 330.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.002183/0.05136, allocations: 83.31 kB / 400.6 MB, free: 11.22 MB / 330.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.003892/0.05525, allocations: 1.997 MB / 402.6 MB, free: 9.215 MB / 330.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.003694/0.05894, allocations: 1.532 MB / 404.1 MB, free: 7.672 MB / 330.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.005536/0.06448, allocations: 4.321 MB / 408.4 MB, free: 3.332 MB / 330.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
Notification: Performance of NFFlatten.flatten: time 0.1411/0.2056, allocations: 3.612 MB / 412 MB, free: 35.77 MB / 330.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.001272/0.2068, allocations: 0.5498 MB / 412.6 MB, free: 35.63 MB / 330.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.003757/0.2106, allocations: 2.044 MB / 414.6 MB, free: 35.63 MB / 330.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.003019/0.2136, allocations: 1.633 MB / 416.3 MB, free: 35.63 MB / 330.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0009565/0.2146, allocations: 313.6 kB / 416.6 MB, free: 35.63 MB / 330.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.00551/0.2201, allocations: 2.047 MB / 418.6 MB, free: 35.63 MB / 330.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.001415/0.2215, allocations: 1.104 MB / 419.7 MB, free: 35.63 MB / 330.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.003333/0.2248, allocations: 1.15 MB / 420.9 MB, free: 35.63 MB / 330.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.008927/0.2338, allocations: 4.853 MB / 425.7 MB, free: 35.08 MB / 330.7 MB
Notification: Performance of FrontEnd - DAE generated: time 5.13e-06/0.2338, allocations: 0.5 kB / 425.7 MB, free: 35.08 MB / 330.7 MB
Notification: Performance of FrontEnd: time 2.023e-06/0.2338, allocations: 0 / 425.7 MB, free: 35.08 MB / 330.7 MB
Notification: Performance of Transformations before backend: time 0.0001586/0.2339, allocations: 0.8438 kB / 425.7 MB, free: 35.08 MB / 330.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 960
 * Number of variables: 960
Notification: Performance of Generate backend data structure: time 0.006885/0.2408, allocations: 4.722 MB / 430.5 MB, free: 32.43 MB / 330.7 MB
Notification: Performance of prepare preOptimizeDAE: time 4.289e-05/0.2408, allocations: 9.422 kB / 430.5 MB, free: 32.43 MB / 330.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.002344/0.2432, allocations: 1.705 MB / 432.2 MB, free: 31.76 MB / 330.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.002115/0.2453, allocations: 1.98 MB / 434.2 MB, free: 30.69 MB / 330.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.000283/0.2456, allocations: 0.5026 MB / 434.7 MB, free: 30.27 MB / 330.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0002651/0.2459, allocations: 304.5 kB / 435 MB, free: 30.18 MB / 330.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.004575/0.2504, allocations: 4.442 MB / 439.4 MB, free: 28.81 MB / 330.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 4.339e-05/0.2505, allocations: 192 / 439.4 MB, free: 28.81 MB / 330.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001546/0.2506, allocations: 118.2 kB / 439.5 MB, free: 28.7 MB / 330.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0002831/0.2509, allocations: 474.3 kB / 440 MB, free: 28.24 MB / 330.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.005548/0.2565, allocations: 5.708 MB / 445.7 MB, free: 22.54 MB / 330.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.01617/0.2726, allocations: 15.69 MB / 461.4 MB, free: 7.062 MB / 330.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.001944/0.2746, allocations: 1.283 MB / 462.7 MB, free: 5.781 MB / 330.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.001146/0.2757, allocations: 0.8678 MB / 463.5 MB, free: 4.91 MB / 330.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.01195/0.2877, allocations: 9.875 MB / 473.4 MB, free: 11.09 MB / 346.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 4.548e-05/0.2877, allocations: 46.7 kB / 473.4 MB, free: 11.03 MB / 346.7 MB
Notification: Performance of pre-optimization done (n=188): time 3.717e-06/0.2877, allocations: 6.688 kB / 473.4 MB, free: 11.03 MB / 346.7 MB
Error: Internal error It is not possible to select continuous time states because Number of Equations 58 greater than number of States 57 to select from.
Error: Internal error Selection of DummyDerivatives failed due to negative system rank of -1!
           There are 31 unassigned equations and 30 potential states.
Error: Internal error - IndexReduction.selectDummyDerivatives2new failed!
Error: Internal error - IndexReduction.processComps4New failed!
Error: Internal error - IndexReduction.dynamicStateSelectionWork failed!
"
[Timeout remaining time 660]
[Calling sys.exit(0), Time elapsed: 2.1468619361985475]