Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Examples.SimpleReactionsWithJunction3.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001007/0.001007, allocations: 92.2 kB / 20.19 MB, free: 4.363 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001022/0.001022, allocations: 173.3 kB / 23.49 MB, free: 1.062 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9686/0.9686, allocations: 177.1 MB / 203.8 MB, free: 5.645 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.1092/0.1092, allocations: 17.47 MB / 277.7 MB, free: 11.63 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Examples.SimpleReactionsWithJunction3,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.SimpleReactionsWithJunction3")
translateModel(Chemical.Examples.SimpleReactionsWithJunction3,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.SimpleReactionsWithJunction3") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.813e-06/1.813e-06, allocations: 0 / 353.5 MB, free: 10.2 MB / 282.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 2.607e-05/2.788e-05, allocations: 5.125 kB / 353.5 MB, free: 10.19 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Processes.mo:1084:7-1084:40:writable] Warning: An inner declaration for outer component dropOfCommons could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Processes.mo:1084:7-1084:40:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"dropOfCommons\" component but
an inner \"dropOfCommons\" component is not defined.
Use Chemical.DropOfCommons in your model
to specify system properties.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1731:7-1731:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1731:7-1731:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Examples.SimpleReactionsWithJunction3): time 0.03436/0.03439, allocations: 33.18 MB / 386.7 MB, free: 9.137 MB / 314.7 MB
Notification: Performance of NFInst.instExpressions: time 0.01344/0.04783, allocations: 10.32 MB / 397 MB, free: 14.77 MB / 330.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.001788/0.04962, allocations: 55.56 kB / 397.1 MB, free: 14.71 MB / 330.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.003767/0.05338, allocations: 1.873 MB / 399 MB, free: 12.83 MB / 330.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.003258/0.05664, allocations: 1.245 MB / 400.2 MB, free: 11.58 MB / 330.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.006192/0.06283, allocations: 4.146 MB / 404.4 MB, free: 7.414 MB / 330.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter r_ref.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter r_ref.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter r_ref.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter r_ref.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter r_ref.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter r_ref.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter r_ref.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter r_ref.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter r_ref.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter r_ref.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter r_ref.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
Notification: Performance of NFFlatten.flatten: time 0.004356/0.06719, allocations: 2.653 MB / 407 MB, free: 4.75 MB / 330.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0007027/0.06789, allocations: 428.2 kB / 407.4 MB, free: 4.289 MB / 330.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.001793/0.06969, allocations: 1.458 MB / 408.9 MB, free: 2.828 MB / 330.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.001333/0.07102, allocations: 1.142 MB / 410 MB, free: 1.684 MB / 330.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0003907/0.07141, allocations: 216 kB / 410.2 MB, free: 1.473 MB / 330.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.1654/0.2368, allocations: 1.953 MB / 412.2 MB, free: 38.55 MB / 330.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.001044/0.2379, allocations: 0.7822 MB / 413 MB, free: 38.55 MB / 330.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.001997/0.2399, allocations: 0.8112 MB / 413.8 MB, free: 38.55 MB / 330.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.008128/0.248, allocations: 3.909 MB / 417.7 MB, free: 38.34 MB / 330.7 MB
Notification: Performance of FrontEnd - DAE generated: time 6.221e-06/0.248, allocations: 0.7969 kB / 417.7 MB, free: 38.34 MB / 330.7 MB
Notification: Performance of FrontEnd: time 1.593e-06/0.248, allocations: 0 / 417.7 MB, free: 38.34 MB / 330.7 MB
Notification: Performance of Transformations before backend: time 0.0001666/0.2482, allocations: 1.656 kB / 417.7 MB, free: 38.34 MB / 330.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 662
 * Number of variables: 662
Notification: Performance of Generate backend data structure: time 0.008554/0.2567, allocations: 3.462 MB / 421.2 MB, free: 36.86 MB / 330.7 MB
Notification: Performance of prepare preOptimizeDAE: time 5.199e-05/0.2568, allocations: 8.812 kB / 421.2 MB, free: 36.86 MB / 330.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.002956/0.2597, allocations: 1.246 MB / 422.4 MB, free: 36.67 MB / 330.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.002479/0.2622, allocations: 1.444 MB / 423.9 MB, free: 36.25 MB / 330.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0002959/0.2625, allocations: 381 kB / 424.2 MB, free: 35.99 MB / 330.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.000319/0.2628, allocations: 206 kB / 424.4 MB, free: 35.99 MB / 330.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.004417/0.2672, allocations: 3.024 MB / 427.5 MB, free: 35.4 MB / 330.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 3.768e-05/0.2673, allocations: 7.031 kB / 427.5 MB, free: 35.4 MB / 330.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001461/0.2674, allocations: 84.52 kB / 427.5 MB, free: 35.34 MB / 330.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0002588/0.2677, allocations: 294.6 kB / 427.8 MB, free: 35.28 MB / 330.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.00542/0.2731, allocations: 3.804 MB / 431.6 MB, free: 34.88 MB / 330.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.01532/0.2884, allocations: 11.49 MB / 443.1 MB, free: 26.48 MB / 330.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.001922/0.2903, allocations: 1.088 MB / 444.2 MB, free: 25.49 MB / 330.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.00114/0.2915, allocations: 0.7412 MB / 445 MB, free: 24.74 MB / 330.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.009724/0.3012, allocations: 8.482 MB / 453.4 MB, free: 16.31 MB / 330.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 3.065e-05/0.3012, allocations: 47.17 kB / 453.5 MB, free: 16.26 MB / 330.7 MB
Notification: Performance of pre-optimization done (n=151): time 3.016e-06/0.3012, allocations: 2.625 kB / 453.5 MB, free: 16.26 MB / 330.7 MB
Error: Internal error It is not possible to select continuous time states because Number of Equations 51 greater than number of States 50 to select from.
Error: Internal error Selection of DummyDerivatives failed due to negative system rank of -1!
           There are 30 unassigned equations and 29 potential states.
Error: Internal error - IndexReduction.selectDummyDerivatives2new failed!
Error: Internal error - IndexReduction.processComps4New failed!
Error: Internal error - IndexReduction.dynamicStateSelectionWork failed!
"
[Timeout remaining time 660]
[Calling sys.exit(0), Time elapsed: 2.048227289924398]