Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Examples.SimpleForwardReaction.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001155/0.001155, allocations: 92.2 kB / 20.19 MB, free: 4.359 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001076/0.001076, allocations: 173 kB / 23.49 MB, free: 1.059 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9998/0.9998, allocations: 177.1 MB / 203.8 MB, free: 5.645 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.1082/0.1082, allocations: 17.46 MB / 277.7 MB, free: 11.63 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Examples.SimpleForwardReaction,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.SimpleForwardReaction")
translateModel(Chemical.Examples.SimpleForwardReaction,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.SimpleForwardReaction") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 2.645e-06/2.645e-06, allocations: 0 / 353.5 MB, free: 10.2 MB / 282.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 3.153e-05/3.417e-05, allocations: 10.25 kB / 353.5 MB, free: 10.19 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1731:7-1731:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1731:7-1731:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Examples.SimpleForwardReaction): time 0.02556/0.0256, allocations: 33.05 MB / 386.6 MB, free: 9.273 MB / 314.7 MB
Notification: Performance of NFInst.instExpressions: time 0.01115/0.03675, allocations: 10.12 MB / 396.7 MB, free: 15.1 MB / 330.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.0007592/0.03751, allocations: 55.56 kB / 396.8 MB, free: 15.05 MB / 330.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.003012/0.04052, allocations: 1.857 MB / 398.6 MB, free: 13.18 MB / 330.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.00163/0.04215, allocations: 1.222 MB / 399.8 MB, free: 11.95 MB / 330.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.0041/0.04625, allocations: 3.341 MB / 403.2 MB, free: 8.594 MB / 330.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter forwardReaction.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter forwardReaction.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter forwardReaction.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter forwardReaction.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter forwardReaction.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter forwardReaction.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter forwardReaction.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter forwardReaction.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter forwardReaction.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter forwardReaction.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter forwardReaction.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
Notification: Performance of NFFlatten.flatten: time 0.002685/0.04893, allocations: 2.6 MB / 405.8 MB, free: 5.984 MB / 330.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0004839/0.04942, allocations: 419.5 kB / 406.2 MB, free: 5.531 MB / 330.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.001052/0.05047, allocations: 1.438 MB / 407.6 MB, free: 4.09 MB / 330.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.001035/0.0515, allocations: 1.13 MB / 408.8 MB, free: 2.957 MB / 330.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0001898/0.05169, allocations: 212 kB / 409 MB, free: 2.75 MB / 330.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.002529/0.05422, allocations: 1.442 MB / 410.4 MB, free: 1.305 MB / 330.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0004384/0.05466, allocations: 0.7554 MB / 411.2 MB, free: 0.5469 MB / 330.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.1559/0.2106, allocations: 0.7879 MB / 412 MB, free: 38.52 MB / 330.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.006314/0.2169, allocations: 3.447 MB / 415.4 MB, free: 38.32 MB / 330.7 MB
Notification: Performance of FrontEnd - DAE generated: time 3.978e-06/0.2169, allocations: 3.312 kB / 415.4 MB, free: 38.32 MB / 330.7 MB
Notification: Performance of FrontEnd: time 2.314e-06/0.2169, allocations: 2.031 kB / 415.4 MB, free: 38.32 MB / 330.7 MB
Notification: Performance of Transformations before backend: time 9.409e-05/0.217, allocations: 0 / 415.4 MB, free: 38.32 MB / 330.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 623
 * Number of variables: 623
Notification: Performance of Generate backend data structure: time 0.005274/0.2223, allocations: 3.247 MB / 418.7 MB, free: 36.88 MB / 330.7 MB
Notification: Performance of prepare preOptimizeDAE: time 4.733e-05/0.2223, allocations: 10 kB / 418.7 MB, free: 36.88 MB / 330.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.001448/0.2238, allocations: 0.9843 MB / 419.7 MB, free: 36.71 MB / 330.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.001834/0.2256, allocations: 1.5 MB / 421.2 MB, free: 36.29 MB / 330.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.000256/0.2258, allocations: 380.3 kB / 421.5 MB, free: 36.03 MB / 330.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0002522/0.2261, allocations: 205.5 kB / 421.7 MB, free: 36.03 MB / 330.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.003328/0.2294, allocations: 2.861 MB / 424.6 MB, free: 35.79 MB / 330.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 3.764e-05/0.2295, allocations: 192 / 424.6 MB, free: 35.79 MB / 330.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001141/0.2296, allocations: 83.33 kB / 424.7 MB, free: 35.79 MB / 330.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0002032/0.2298, allocations: 319.5 kB / 425 MB, free: 35.78 MB / 330.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.004095/0.2339, allocations: 3.681 MB / 428.7 MB, free: 35.48 MB / 330.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.009702/0.2436, allocations: 8.952 MB / 437.6 MB, free: 30.69 MB / 330.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.001084/0.2447, allocations: 0.5817 MB / 438.2 MB, free: 30.17 MB / 330.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0004177/0.2451, allocations: 265.9 kB / 438.5 MB, free: 29.94 MB / 330.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.003875/0.249, allocations: 3.472 MB / 441.9 MB, free: 26.93 MB / 330.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.274e-05/0.249, allocations: 46.05 kB / 442 MB, free: 26.87 MB / 330.7 MB
Notification: Performance of pre-optimization done (n=78): time 1.733e-06/0.249, allocations: 0 / 442 MB, free: 26.87 MB / 330.7 MB
Notification: Performance of matching and sorting (n=92): time 0.004162/0.2531, allocations: 2.601 MB / 444.6 MB, free: 24.25 MB / 330.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 2.323e-05/0.2532, allocations: 63.69 kB / 444.6 MB, free: 24.18 MB / 330.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter forwardReaction.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter forwardReaction.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter forwardReaction.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter forwardReaction.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter forwardReaction.nextProducts[1].data.bhigh[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter forwardReaction.nextProducts[1].data.bhigh[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter forwardReaction.nextProducts[1].data.bhigh[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter forwardReaction.nextProducts[1].data.ahigh[7] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter forwardReaction.nextProducts[1].data.ahigh[6] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter forwardReaction.nextProducts[1].data.ahigh[5] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter forwardReaction.nextProducts[1].data.ahigh[4] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter forwardReaction.nextProducts[1].data.ahigh[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter forwardReaction.nextProducts[1].data.ahigh[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter forwardReaction.nextProducts[1].data.ahigh[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter forwardReaction.nextProducts[1].data.blow[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter forwardReaction.nextProducts[1].data.blow[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter forwardReaction.nextProducts[1].data.blow[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter forwardReaction.nextProducts[1].data.alow[7] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter forwardReaction.nextProducts[1].data.alow[6] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter forwardReaction.nextProducts[1].data.alow[5] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter forwardReaction.nextProducts[1].data.alow[4] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter forwardReaction.nextProducts[1].data.alow[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter forwardReaction.nextProducts[1].data.alow[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter forwardReaction.nextProducts[1].data.alow[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter forwardReaction.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter forwardReaction.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter forwardReaction.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.001304/0.2545, allocations: 1.682 MB / 446.3 MB, free: 22.48 MB / 330.7 MB
Notification: Performance of collectPreVariables (initialization): time 6.339e-05/0.2545, allocations: 41.7 kB / 446.4 MB, free: 22.44 MB / 330.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0005339/0.2551, allocations: 1.465 MB / 447.8 MB, free: 20.97 MB / 330.7 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0001741/0.2552, allocations: 347.2 kB / 448.2 MB, free: 20.64 MB / 330.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0003378/0.2556, allocations: 417 kB / 448.6 MB, free: 20.22 MB / 330.7 MB
Notification: Performance of setup shared object (initialization): time 4.86e-05/0.2556, allocations: 480.8 kB / 449 MB, free: 19.75 MB / 330.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0004298/0.2561, allocations: 266 kB / 449.3 MB, free: 19.49 MB / 330.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.0006878/0.2567, allocations: 1.357 MB / 450.7 MB, free: 17.65 MB / 330.7 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.001267/0.258, allocations: 1.674 MB / 452.3 MB, free: 15.64 MB / 330.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 8.636e-06/0.258, allocations: 8 kB / 452.3 MB, free: 15.64 MB / 330.7 MB
Notification: Performance of matching and sorting (n=193) (initialization): time 0.002107/0.2601, allocations: 1.617 MB / 454 MB, free: 14.18 MB / 330.7 MB
Notification: Performance of prepare postOptimizeDAE: time 2.055e-05/0.2601, allocations: 12 kB / 454 MB, free: 14.16 MB / 330.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.518e-05/0.2602, allocations: 24 kB / 454 MB, free: 14.14 MB / 330.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 0.0002256/0.2604, allocations: 112.6 kB / 454.1 MB, free: 14.03 MB / 330.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.001477/0.2619, allocations: 0.6223 MB / 454.7 MB, free: 13.45 MB / 330.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.001287/0.2632, allocations: 3.549 MB / 458.3 MB, free: 9.684 MB / 330.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.000495/0.2636, allocations: 68.94 kB / 458.3 MB, free: 9.621 MB / 330.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0001318/0.2638, allocations: 194.6 kB / 458.5 MB, free: 9.434 MB / 330.7 MB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 107
 * Number of states: 0 ()
 * Number of discrete variables: 5 (forwardReaction.nextProducts[1].SelfClustering,forwardReaction.products[1].definition.SelfClustering,forwardReaction.products[1].definition.data.phase,substance.substanceDefinitionVar.SelfClustering,substance.substanceDefinitionVar.data.phase)
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (191):
 * Single equations (assignments): 189
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 2
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 2 systems
   {(1,1,100.0%), (1,1,100.0%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 0 systems
Notification: Performance of prepare postOptimizeDAE: time 0.0004552/0.2642, allocations: 274 kB / 458.8 MB, free: 9.184 MB / 330.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0002296/0.2645, allocations: 206.9 kB / 459 MB, free: 8.98 MB / 330.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.002064/0.2665, allocations: 1.747 MB / 460.7 MB, free: 7.316 MB / 330.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 4.608e-06/0.2665, allocations: 10.66 kB / 460.8 MB, free: 7.309 MB / 330.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 2.866e-06/0.2665, allocations: 0 / 460.8 MB, free: 7.309 MB / 330.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 6.492e-06/0.2665, allocations: 3.984 kB / 460.8 MB, free: 7.305 MB / 330.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.002637/0.2692, allocations: 2.605 MB / 463.4 MB, free: 4.645 MB / 330.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 3.246e-06/0.2692, allocations: 5.531 kB / 463.4 MB, free: 4.645 MB / 330.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.001103/0.2703, allocations: 349.2 kB / 463.7 MB, free: 4.32 MB / 330.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 0.0001415/0.2704, allocations: 64.67 kB / 463.8 MB, free: 4.254 MB / 330.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 4.192e-05/0.2705, allocations: 23.66 kB / 463.8 MB, free: 4.234 MB / 330.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.001068/0.2715, allocations: 3.501 MB / 467.3 MB, free: 0.5156 MB / 330.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 4.789e-06/0.2715, allocations: 14.44 kB / 467.3 MB, free: 0.5078 MB / 330.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.00158/0.2731, allocations: 1.148 MB / 468.5 MB, free: 15.29 MB / 346.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.0001571/0.2733, allocations: 134.9 kB / 468.6 MB, free: 15.16 MB / 346.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.000162/0.2734, allocations: 22.61 kB / 468.6 MB, free: 15.14 MB / 346.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0003939/0.2738, allocations: 23.98 kB / 468.6 MB, free: 15.12 MB / 346.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0001286/0.274, allocations: 67.06 kB / 468.7 MB, free: 15.06 MB / 346.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 4.529e-05/0.274, allocations: 27.98 kB / 468.7 MB, free: 15.03 MB / 346.7 MB
Notification: Performance of sorting global known variables: time 0.001128/0.2751, allocations: 0.8799 MB / 469.6 MB, free: 14.16 MB / 346.7 MB
Notification: Performance of sort global known variables: time 8.1e-08/0.2751, allocations: 0 / 469.6 MB, free: 14.16 MB / 346.7 MB
Notification: Performance of remove unused functions: time 0.001587/0.2767, allocations: 490.3 kB / 470.1 MB, free: 13.68 MB / 346.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 10
 * Number of states: 2 (substance.logn,substance1.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (83):
 * Single equations (assignments): 81
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 2
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 2 systems
   {(1,1,100.0%), (1,1,100.0%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 0 systems
Notification: Performance of Backend phase and start with SimCode phase: time 0.0005434/0.2773, allocations: 353.8 kB / 470.4 MB, free: 13.39 MB / 346.7 MB
Notification: Performance of simCode: created initialization part: time 0.001817/0.2791, allocations: 1.199 MB / 471.6 MB, free: 12.25 MB / 346.7 MB
Notification: Performance of simCode: created event and clocks part: time 2.504e-06/0.2791, allocations: 0 / 471.6 MB, free: 12.25 MB / 346.7 MB
Notification: Performance of simCode: created simulation system equations: time 0.0007/0.2798, allocations: 0.6029 MB / 472.2 MB, free: 11.63 MB / 346.7 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.001243/0.281, allocations: 388.7 kB / 472.6 MB, free: 11.3 MB / 346.7 MB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.006086/0.2871, allocations: 3.766 MB / 476.4 MB, free: 7.5 MB / 346.7 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.000523/0.2876, allocations: 0.541 MB / 476.9 MB, free: 6.93 MB / 346.7 MB
Notification: Performance of simCode: alias equations: time 0.001287/0.2889, allocations: 0.5571 MB / 477.5 MB, free: 6.531 MB / 346.7 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0004341/0.2894, allocations: 179.1 kB / 477.7 MB, free: 6.367 MB / 346.7 MB
Notification: Performance of SimCode: time 6.21e-07/0.2894, allocations: 0 / 477.7 MB, free: 6.367 MB / 346.7 MB
Notification: Performance of Templates: time 0.03417/0.3235, allocations: 23.79 MB / 0.4897 GB, free: 15.75 MB / 378.7 MB
"
[Timeout remaining time 660]
make -j1 -f Chemical_master_Chemical.Examples.SimpleForwardReaction.makefile [Timeout 660]
(rm -f Chemical_master_Chemical.Examples.SimpleForwardReaction.pipe ; mkfifo Chemical_master_Chemical.Examples.SimpleForwardReaction.pipe ; head -c 1048576 < Chemical_master_Chemical.Examples.SimpleForwardReaction.pipe >> ../files/Chemical_master_Chemical.Examples.SimpleForwardReaction.sim & ./Chemical_master_Chemical.Examples.SimpleForwardReaction -abortSlowSimulation -alarm=240  -lv LOG_STATS > Chemical_master_Chemical.Examples.SimpleForwardReaction.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 3.8925180728547275]