Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Examples.EnzymeKinetics.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0009312/0.0009312, allocations: 92.2 kB / 20.19 MB, free: 4.363 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.0009785/0.0009785, allocations: 173.3 kB / 23.5 MB, free: 1.059 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.02/1.02, allocations: 177.1 MB / 203.8 MB, free: 5.637 MB / 186.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.1066/0.1066, allocations: 17.46 MB / 277.7 MB, free: 11.62 MB / 266.7 MB " [Timeout remaining time 180] Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Chemical.Examples.EnzymeKinetics,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.EnzymeKinetics") translateModel(Chemical.Examples.EnzymeKinetics,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.EnzymeKinetics") [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 3.546e-06/3.546e-06, allocations: 0 / 353.6 MB, free: 10.18 MB / 282.7 MB Notification: Performance of FrontEnd - Absyn->SCode: time 2.872e-05/3.227e-05, allocations: 6.25 kB / 353.6 MB, free: 10.18 MB / 282.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1586:5-1586:64:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1586:5-1586:64:writable] Notification: The diagnostics message for the missing inner is: Your model is using an outer \"system\" component but an inner \"system\" component is not defined. For simulation drag Modelica.Fluid.System into your model to specify system properties. Notification: Performance of NFInst.instantiate(Chemical.Examples.EnzymeKinetics): time 0.05235/0.05238, allocations: 43.94 MB / 397.5 MB, free: 14.32 MB / 330.7 MB Notification: Performance of NFInst.instExpressions: time 0.02447/0.07685, allocations: 12.79 MB / 410.3 MB, free: 1.477 MB / 330.7 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.003897/0.08075, allocations: 142.9 kB / 410.4 MB, free: 1.336 MB / 330.7 MB Notification: Performance of NFTyping.typeComponents: time 0.1617/0.2425, allocations: 2.428 MB / 412.9 MB, free: 34.24 MB / 330.7 MB Notification: Performance of NFTyping.typeBindings: time 0.00808/0.2506, allocations: 2.613 MB / 415.5 MB, free: 33.81 MB / 330.7 MB Notification: Performance of NFTyping.typeClassSections: time 0.008493/0.2591, allocations: 4.806 MB / 420.3 MB, free: 33.5 MB / 330.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. Notification: Performance of NFFlatten.flatten: time 0.009562/0.2686, allocations: 6.709 MB / 427 MB, free: 31.71 MB / 330.7 MB Notification: Performance of NFFlatten.resolveConnections: time 0.001813/0.2704, allocations: 1.373 MB / 428.4 MB, free: 31.41 MB / 330.7 MB Notification: Performance of NFEvalConstants.evaluate: time 0.004929/0.2754, allocations: 3.915 MB / 432.3 MB, free: 29.84 MB / 330.7 MB Notification: Performance of NFSimplifyModel.simplify: time 0.003178/0.2786, allocations: 3.098 MB / 435.4 MB, free: 28.72 MB / 330.7 MB Notification: Performance of NFPackage.collectConstants: time 0.0008119/0.2794, allocations: 0.6207 MB / 436 MB, free: 28.72 MB / 330.7 MB Notification: Performance of NFFlatten.collectFunctions: time 0.00449/0.2839, allocations: 2.357 MB / 438.4 MB, free: 28.14 MB / 330.7 MB Notification: Performance of NFScalarize.scalarize: time 0.0009831/0.2848, allocations: 2.073 MB / 440.4 MB, free: 26.72 MB / 330.7 MB Notification: Performance of NFVerifyModel.verify: time 0.001664/0.2865, allocations: 2.226 MB / 442.7 MB, free: 25.21 MB / 330.7 MB Notification: Performance of NFConvertDAE.convert: time 0.006587/0.2931, allocations: 7.665 MB / 450.3 MB, free: 18.24 MB / 330.7 MB Notification: Performance of FrontEnd - DAE generated: time 4.939e-06/0.2931, allocations: 0 / 450.3 MB, free: 18.24 MB / 330.7 MB Notification: Performance of FrontEnd: time 1.643e-06/0.2931, allocations: 0 / 450.3 MB, free: 18.24 MB / 330.7 MB Notification: Performance of Transformations before backend: time 5.334e-05/0.2931, allocations: 0 / 450.3 MB, free: 18.24 MB / 330.7 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 1844 * Number of variables: 1844 Notification: Performance of Generate backend data structure: time 0.007047/0.3002, allocations: 8.344 MB / 458.7 MB, free: 9.941 MB / 330.7 MB Notification: Performance of prepare preOptimizeDAE: time 4.359e-05/0.3002, allocations: 8.031 kB / 458.7 MB, free: 9.934 MB / 330.7 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.002684/0.3029, allocations: 2.844 MB / 461.5 MB, free: 7.109 MB / 330.7 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.002963/0.3059, allocations: 3.57 MB / 465.1 MB, free: 3.695 MB / 330.7 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0003434/0.3062, allocations: 0.9529 MB / 466 MB, free: 2.648 MB / 330.7 MB Notification: Performance of preOpt expandDerOperator (simulation): time 0.0004535/0.3067, allocations: 0.5864 MB / 466.6 MB, free: 2.074 MB / 330.7 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.008878/0.3156, allocations: 8.01 MB / 474.6 MB, free: 10.06 MB / 346.7 MB Notification: Performance of preOpt findStateOrder (simulation): time 8.525e-05/0.3156, allocations: 2.844 kB / 474.6 MB, free: 10.06 MB / 346.7 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0003213/0.316, allocations: 241.8 kB / 474.9 MB, free: 9.836 MB / 346.7 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0006574/0.3166, allocations: 0.8233 MB / 475.7 MB, free: 9.012 MB / 346.7 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.01237/0.329, allocations: 9.772 MB / 485.5 MB, free: 15.24 MB / 362.7 MB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.03217/0.3612, allocations: 27.61 MB / 0.501 GB, free: 4.195 MB / 378.7 MB Notification: Performance of preOpt comSubExp (simulation): time 0.003224/0.3644, allocations: 2.321 MB / 0.5033 GB, free: 1.875 MB / 378.7 MB Notification: Performance of preOpt resolveLoops (simulation): time 0.002173/0.3666, allocations: 1.607 MB / 0.5049 GB, free: 264 kB / 378.7 MB Notification: Performance of preOpt evalFunc (simulation): time 0.01442/0.381, allocations: 14.06 MB / 0.5186 GB, free: 2.301 MB / 394.7 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 4.2e-05/0.381, allocations: 62.02 kB / 0.5187 GB, free: 2.23 MB / 394.7 MB Notification: Performance of pre-optimization done (n=305): time 3.847e-06/0.381, allocations: 0 / 0.5187 GB, free: 2.23 MB / 394.7 MB Notification: Performance of matching and sorting (n=424): time 0.06883/0.4499, allocations: 28.08 MB / 0.5461 GB, free: 6.289 MB / 426.7 MB Notification: Performance of inlineWhenForInitialization (initialization): time 4.92e-05/0.4499, allocations: 86.08 kB / 0.5462 GB, free: 6.191 MB / 426.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.bhigh[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.bhigh[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.bhigh[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.ahigh[7] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.ahigh[6] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.ahigh[5] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.ahigh[4] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.ahigh[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.ahigh[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.ahigh[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.blow[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.blow[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.blow[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.alow[7] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.alow[6] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.alow[5] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.alow[4] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.alow[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.alow[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.alow[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[7] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[6] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[5] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[4] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[7] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[6] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[5] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[4] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.003484/0.4534, allocations: 3.187 MB / 0.5493 GB, free: 3 MB / 426.7 MB Notification: Performance of collectPreVariables (initialization): time 0.001399/0.4548, allocations: 88.67 kB / 0.5494 GB, free: 2.91 MB / 426.7 MB Notification: Performance of collectInitialEqns (initialization): time 0.001942/0.4567, allocations: 3.401 MB / 0.5527 GB, free: 15.5 MB / 442.7 MB Notification: Performance of collectInitialBindings (initialization): time 0.001454/0.4582, allocations: 1.492 MB / 0.5542 GB, free: 14.03 MB / 442.7 MB Notification: Performance of simplifyInitialFunctions (initialization): time 0.002012/0.4602, allocations: 1.273 MB / 0.5554 GB, free: 12.74 MB / 442.7 MB Notification: Performance of setup shared object (initialization): time 0.0001009/0.4603, allocations: 487.2 kB / 0.5559 GB, free: 12.27 MB / 442.7 MB Notification: Performance of preBalanceInitialSystem (initialization): time 0.00372/0.464, allocations: 2.654 MB / 0.5584 GB, free: 9.613 MB / 442.7 MB Notification: Performance of partitionIndependentBlocks (initialization): time 0.00458/0.4686, allocations: 4.481 MB / 0.5628 GB, free: 4.391 MB / 442.7 MB Notification: It was not possible to check the given initialization system for consistency symbolically, because the relevant equations are part of an algebraic loop. This is not supported yet. Notification: Performance of analyzeInitialSystem (initialization): time 0.1602/0.6288, allocations: 10.97 MB / 0.5735 GB, free: 147.1 MB / 442.7 MB Notification: Performance of solveInitialSystemEqSystem (initialization): time 6.816e-05/0.6289, allocations: 8.719 kB / 0.5735 GB, free: 147.1 MB / 442.7 MB Notification: Performance of matching and sorting (n=587) (initialization): time 0.01759/0.6464, allocations: 9.081 MB / 0.5824 GB, free: 146.6 MB / 442.7 MB Notification: Performance of prepare postOptimizeDAE: time 4.653e-05/0.6465, allocations: 21.12 kB / 0.5824 GB, free: 146.6 MB / 442.7 MB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0002614/0.6468, allocations: 167.7 kB / 0.5826 GB, free: 146.6 MB / 442.7 MB Notification: Performance of postOpt tearingSystem (initialization): time 0.01394/0.6607, allocations: 4.389 MB / 0.5869 GB, free: 146.5 MB / 442.7 MB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.00688/0.6676, allocations: 1.78 MB / 0.5886 GB, free: 145.8 MB / 442.7 MB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.01046/0.678, allocations: 9.737 MB / 0.5981 GB, free: 137.1 MB / 442.7 MB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.003592/0.6816, allocations: 266 kB / 0.5984 GB, free: 136.9 MB / 442.7 MB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0007777/0.6824, allocations: 0.7353 MB / 0.5991 GB, free: 136.2 MB / 442.7 MB Warning: Assuming fixed start value for the following 1 variables: liquidWater.substance.dH:VARIABLE(fixed = true ) type: Real Warning: The initial conditions are over specified. The following 2 initial equations are redundant, so they are removed from the initialization system: chemicalReaction1.nextProducts[1].SelfClustering_dH = 0.0 chemicalReaction1.nextProducts[1].SelfClustering = false. Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 154 * Number of states: 0 () * Number of discrete variables: 12 (chemicalReaction.nextProducts[1].SelfClustering,chemicalReaction.processDefinition.SelfClustering,liquidWater.substanceDefinitionVar.SelfClustering,liquidWater.substanceDefinitionVar.data.phase,S.substanceDefinitionVar.SelfClustering,S.substanceDefinitionVar.data.phase,chemicalReaction1.products[1].definition.SelfClustering,chemicalReaction1.products[1].definition.data.phase,chemicalReaction1.nextProducts[1].SelfClustering,chemicalReaction1.substrates[1].definition.SelfClustering,chemicalReaction1.substrates[1].definition.data.phase,chemicalReaction.processDefinition.data.phase) * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (425): * Single equations (assignments): 418 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 3 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 4 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 2 systems {(1,12,100.0%), (5,16,44.0%)} * Non-linear torn systems (#iteration vars, #inner vars): 2 systems {(9,26), (7,6)} Notification: Performance of prepare postOptimizeDAE: time 0.002596/0.685, allocations: 413.4 kB / 0.5995 GB, free: 135.8 MB / 442.7 MB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.00193/0.6869, allocations: 0.7243 MB / 0.6002 GB, free: 135.4 MB / 442.7 MB Error: Internal error IndexReduction.pantelidesIndexReduction failed! System is structurally singular and cannot be handled because the number of unassigned equations is larger than the number of states. Use -d=bltdump to get more information. Error: Internal error Transformation Module PFPlusExt index Reduction Method Pantelides failed! Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.01082/0.6977, allocations: 8.581 MB / 0.6086 GB, free: 128.2 MB / 442.7 MB Error: post-optimization module wrapFunctionCalls (simulation) failed. " [Timeout remaining time 659] [Calling sys.exit(0), Time elapsed: 2.486823858227581]