Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Obsolete.Examples.GasSolubility.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001054/0.001054, allocations: 92.2 kB / 20.19 MB, free: 4.363 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001005/0.001005, allocations: 177 kB / 23.49 MB, free: 1.059 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.921/0.921, allocations: 177.1 MB / 203.8 MB, free: 5.293 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo): time 0.08427/0.08427, allocations: 17.38 MB / 277.7 MB, free: 11.58 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Obsolete.Examples.GasSolubility,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.GasSolubility")
translateModel(Chemical.Obsolete.Examples.GasSolubility,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.GasSolubility") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.884e-06/1.884e-06, allocations: 0 / 353.4 MB, free: 10.3 MB / 282.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 2.562e-05/2.75e-05, allocations: 6.312 kB / 353.4 MB, free: 10.29 MB / 282.7 MB
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.GasSolubility): time 0.007831/0.007859, allocations: 10.21 MB / 363.7 MB, free: 36 kB / 282.7 MB
Notification: Performance of NFInst.instExpressions: time 0.0255/0.03336, allocations: 33.02 MB / 396.7 MB, free: 14.89 MB / 330.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.001596/0.03495, allocations: 35.69 kB / 396.7 MB, free: 14.85 MB / 330.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.001481/0.03643, allocations: 0.6355 MB / 397.4 MB, free: 14.21 MB / 330.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.005618/0.04205, allocations: 2.703 MB / 400.1 MB, free: 11.49 MB / 330.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.008835/0.05089, allocations: 4.503 MB / 404.6 MB, free: 6.957 MB / 330.7 MB
Notification: Performance of NFFlatten.flatten: time 0.003962/0.05485, allocations: 3.112 MB / 407.7 MB, free: 3.832 MB / 330.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.001994/0.05684, allocations: 1.426 MB / 409.1 MB, free: 2.363 MB / 330.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.002804/0.05965, allocations: 2.059 MB / 411.2 MB, free: 308 kB / 330.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.1362/0.1959, allocations: 1.327 MB / 412.5 MB, free: 22.71 MB / 330.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.001054/0.1969, allocations: 263.2 kB / 412.7 MB, free: 22.71 MB / 330.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.008088/0.205, allocations: 3.456 MB / 416.2 MB, free: 22.71 MB / 330.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.001002/0.206, allocations: 0.6246 MB / 416.8 MB, free: 22.71 MB / 330.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.00187/0.2079, allocations: 0.9712 MB / 417.8 MB, free: 22.71 MB / 330.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.01339/0.2213, allocations: 6.266 MB / 424.1 MB, free: 22.32 MB / 330.7 MB
Notification: Performance of FrontEnd - DAE generated: time 6.202e-06/0.2213, allocations: 3.969 kB / 424.1 MB, free: 22.32 MB / 330.7 MB
Notification: Performance of FrontEnd: time 1.793e-06/0.2213, allocations: 0.6562 kB / 424.1 MB, free: 22.32 MB / 330.7 MB
Notification: Performance of Transformations before backend: time 8.571e-05/0.2214, allocations: 2 kB / 424.1 MB, free: 22.32 MB / 330.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 539
 * Number of variables: 539
Notification: Performance of Generate backend data structure: time 0.004275/0.2256, allocations: 3.336 MB / 427.4 MB, free: 20.76 MB / 330.7 MB
Notification: Performance of prepare preOptimizeDAE: time 3.995e-05/0.2257, allocations: 13.78 kB / 427.4 MB, free: 20.76 MB / 330.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.001916/0.2276, allocations: 0.9721 MB / 428.4 MB, free: 20.44 MB / 330.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.001205/0.2288, allocations: 1.097 MB / 429.5 MB, free: 20.1 MB / 330.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 7.302e-05/0.2289, allocations: 162 kB / 429.6 MB, free: 20.09 MB / 330.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0002192/0.2291, allocations: 222.2 kB / 429.9 MB, free: 20.09 MB / 330.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.002221/0.2313, allocations: 2.041 MB / 431.9 MB, free: 19.84 MB / 330.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 3.435e-05/0.2314, allocations: 3.656 kB / 431.9 MB, free: 19.84 MB / 330.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001407/0.2315, allocations: 83.12 kB / 432 MB, free: 19.84 MB / 330.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 3.16e-05/0.2315, allocations: 57.91 kB / 432 MB, free: 19.84 MB / 330.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.002555/0.2341, allocations: 2.251 MB / 434.3 MB, free: 19.79 MB / 330.7 MB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.007191/0.2413, allocations: 6.292 MB / 440.6 MB, free: 17.29 MB / 330.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.003358/0.2446, allocations: 3.574 MB / 444.2 MB, free: 16.23 MB / 330.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0007009/0.2453, allocations: 0.6447 MB / 444.8 MB, free: 15.57 MB / 330.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.005844/0.2512, allocations: 4.65 MB / 449.5 MB, free: 11 MB / 330.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 3.092e-05/0.2512, allocations: 58.17 kB / 449.5 MB, free: 10.94 MB / 330.7 MB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.0004488/0.2517, allocations: 171.4 kB / 449.7 MB, free: 10.77 MB / 330.7 MB
Notification: Performance of pre-optimization done (n=138): time 5.55e-06/0.2517, allocations: 0 / 449.7 MB, free: 10.77 MB / 330.7 MB
Notification: Performance of matching and sorting (n=170): time 0.01345/0.2651, allocations: 5.375 MB / 455.1 MB, free: 5.398 MB / 330.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 3.221e-05/0.2651, allocations: 77.41 kB / 455.1 MB, free: 5.309 MB / 330.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.001028/0.2662, allocations: 1.303 MB / 456.4 MB, free: 3.969 MB / 330.7 MB
Notification: Performance of collectPreVariables (initialization): time 9.301e-05/0.2663, allocations: 49.7 kB / 456.5 MB, free: 3.914 MB / 330.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0003622/0.2666, allocations: 1.141 MB / 457.6 MB, free: 2.77 MB / 330.7 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0002799/0.2669, allocations: 0.6159 MB / 458.2 MB, free: 2.164 MB / 330.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0003798/0.2673, allocations: 487.2 kB / 458.7 MB, free: 1.68 MB / 330.7 MB
Notification: Performance of setup shared object (initialization): time 4.151e-05/0.2673, allocations: 476.8 kB / 459.2 MB, free: 1.211 MB / 330.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.000608/0.2679, allocations: 432.7 kB / 459.6 MB, free: 0.7852 MB / 330.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.001128/0.2691, allocations: 1.556 MB / 461.2 MB, free: 14.75 MB / 346.7 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.002103/0.2712, allocations: 2.18 MB / 463.3 MB, free: 12.18 MB / 346.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.898e-05/0.2712, allocations: 8 kB / 463.3 MB, free: 12.17 MB / 346.7 MB
Notification: Performance of matching and sorting (n=317) (initialization): time 0.004488/0.2757, allocations: 2.483 MB / 465.8 MB, free: 9.836 MB / 346.7 MB
Notification: Performance of prepare postOptimizeDAE: time 3.205e-05/0.2757, allocations: 18.34 kB / 465.8 MB, free: 9.82 MB / 346.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 3.303e-05/0.2757, allocations: 24 kB / 465.9 MB, free: 9.797 MB / 346.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 0.002789/0.2785, allocations: 0.6777 MB / 466.5 MB, free: 9.102 MB / 346.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.001428/0.28, allocations: 0.5964 MB / 467.1 MB, free: 8.547 MB / 346.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.006677/0.2866, allocations: 8.729 MB / 475.9 MB, free: 15.39 MB / 362.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.001311/0.2879, allocations: 80 kB / 475.9 MB, free: 15.31 MB / 362.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.000192/0.2881, allocations: 136 kB / 476.1 MB, free: 15.18 MB / 362.7 MB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 117
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (305):
 * Single equations (assignments): 301
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 4
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 2 systems
   {(1,3,100.0%), (1,3,100.0%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 2 systems
   {(1,3), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.0006375/0.2888, allocations: 314 kB / 476.4 MB, free: 14.9 MB / 362.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0003667/0.2891, allocations: 222.9 kB / 476.6 MB, free: 14.68 MB / 362.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.00399/0.2931, allocations: 2.056 MB / 478.7 MB, free: 12.62 MB / 362.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.392e-05/0.2932, allocations: 16 kB / 478.7 MB, free: 12.61 MB / 362.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 6.622e-06/0.2932, allocations: 4.766 kB / 478.7 MB, free: 12.61 MB / 362.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.464e-05/0.2932, allocations: 11.91 kB / 478.7 MB, free: 12.59 MB / 362.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.001747/0.2949, allocations: 1.316 MB / 480 MB, free: 11.25 MB / 362.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 1.14e-05/0.2949, allocations: 0 / 480 MB, free: 11.25 MB / 362.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0007418/0.2957, allocations: 353.1 kB / 480.4 MB, free: 10.92 MB / 362.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 0.002729/0.2984, allocations: 0.6385 MB / 481 MB, free: 10.27 MB / 362.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0001456/0.2985, allocations: 63.97 kB / 481.1 MB, free: 10.21 MB / 362.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.006984/0.3055, allocations: 8.551 MB / 489.6 MB, free: 1.219 MB / 362.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 3.216e-06/0.3055, allocations: 0 / 489.6 MB, free: 1.219 MB / 362.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.005574/0.3111, allocations: 2.434 MB / 492 MB, free: 14.73 MB / 378.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.0004546/0.3116, allocations: 162.8 kB / 492.2 MB, free: 14.57 MB / 378.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0002064/0.3118, allocations: 32 kB / 492.2 MB, free: 14.54 MB / 378.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0006372/0.3124, allocations: 48 kB / 492.3 MB, free: 14.49 MB / 378.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0003127/0.3127, allocations: 153 kB / 492.4 MB, free: 14.34 MB / 378.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.0001196/0.3128, allocations: 71.97 kB / 492.5 MB, free: 14.27 MB / 378.7 MB
Notification: Performance of sorting global known variables: time 0.0008663/0.3137, allocations: 0.7514 MB / 493.2 MB, free: 13.52 MB / 378.7 MB
Notification: Performance of sort global known variables: time 1e-07/0.3137, allocations: 0 / 493.2 MB, free: 13.52 MB / 378.7 MB
Notification: Performance of remove unused functions: time 0.003748/0.3175, allocations: 1.379 MB / 494.6 MB, free: 12.13 MB / 378.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 9
 * Number of states: 9 (blood_plasma.temperature,red_cells.temperature,CO2_unbound_plasma.logn,O2_unbound_plasma.logn,CO2_unbound_erythrocyte.logn,O2_unbound_erythrocyte_NIST.logn,water_plasma.logn,water.logn,water_plasma1.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (183):
 * Single equations (assignments): 179
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 4
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 2 systems
   {(1,3,100.0%), (1,3,100.0%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 2 systems
   {(1,3), (1,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.003044/0.3205, allocations: 1.601 MB / 496.2 MB, free: 10.73 MB / 378.7 MB
Notification: Performance of simCode: created initialization part: time 0.003439/0.3239, allocations: 2.184 MB / 498.4 MB, free: 8.562 MB / 378.7 MB
Notification: Performance of simCode: created event and clocks part: time 4.528e-06/0.3239, allocations: 0 / 498.4 MB, free: 8.562 MB / 378.7 MB
Notification: Performance of simCode: created simulation system equations: time 0.001704/0.3256, allocations: 1.397 MB / 499.8 MB, free: 7.133 MB / 378.7 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.001592/0.3272, allocations: 410.8 kB / 0.4885 GB, free: 6.742 MB / 378.7 MB
Error: Error parsing unit kDa: Unit not found
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.006143/0.3334, allocations: 3.358 MB / 0.4918 GB, free: 3.316 MB / 378.7 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0003052/0.3337, allocations: 333.5 kB / 0.4921 GB, free: 2.965 MB / 378.7 MB
Notification: Performance of simCode: alias equations: time 0.001366/0.335, allocations: 424.6 kB / 0.4925 GB, free: 2.551 MB / 378.7 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0005515/0.3356, allocations: 291.8 kB / 0.4928 GB, free: 2.266 MB / 378.7 MB
Notification: Performance of SimCode: time 1.473e-06/0.3356, allocations: 0 / 0.4928 GB, free: 2.266 MB / 378.7 MB
Notification: Performance of Templates: time 0.09429/0.4299, allocations: 47.48 MB / 0.5391 GB, free: 3.273 MB / 426.7 MB
"
[Timeout remaining time 660]
make -j1 -f Chemical_Chemical.Obsolete.Examples.GasSolubility.makefile [Timeout 660]
(rm -f Chemical_Chemical.Obsolete.Examples.GasSolubility.pipe ; mkfifo Chemical_Chemical.Obsolete.Examples.GasSolubility.pipe ; head -c 1048576 < Chemical_Chemical.Obsolete.Examples.GasSolubility.pipe >> ../files/Chemical_Chemical.Obsolete.Examples.GasSolubility.sim & ./Chemical_Chemical.Obsolete.Examples.GasSolubility -abortSlowSimulation -alarm=240  -lv LOG_STATS > Chemical_Chemical.Obsolete.Examples.GasSolubility.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 4.314372769091278]