Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Obsolete.Examples.ExothermicReaction.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0009821/0.0009821, allocations: 92.2 kB / 20.19 MB, free: 4.363 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.0009678/0.0009678, allocations: 173 kB / 23.5 MB, free: 1.059 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.008/1.008, allocations: 177.1 MB / 203.8 MB, free: 5.629 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo): time 0.09788/0.09788, allocations: 17.38 MB / 277.7 MB, free: 11.7 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Obsolete.Examples.ExothermicReaction,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.ExothermicReaction")
translateModel(Chemical.Obsolete.Examples.ExothermicReaction,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.ExothermicReaction") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.683e-06/1.683e-06, allocations: 0 / 353.5 MB, free: 10.3 MB / 282.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 2.146e-05/2.314e-05, allocations: 2.312 kB / 353.5 MB, free: 10.3 MB / 282.7 MB
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.ExothermicReaction): time 0.006624/0.006647, allocations: 8.492 MB / 361.9 MB, free: 1.77 MB / 282.7 MB
Notification: Performance of NFInst.instExpressions: time 0.02088/0.02753, allocations: 23.37 MB / 385.3 MB, free: 10.31 MB / 314.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.0009976/0.02853, allocations: 31.75 kB / 385.3 MB, free: 10.28 MB / 314.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.00136/0.02989, allocations: 492 kB / 385.8 MB, free: 9.793 MB / 314.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.006247/0.03614, allocations: 2.113 MB / 387.9 MB, free: 7.664 MB / 314.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.008263/0.0444, allocations: 3.137 MB / 391.1 MB, free: 4.508 MB / 314.7 MB
Notification: Performance of NFFlatten.flatten: time 0.003041/0.04744, allocations: 2.584 MB / 393.7 MB, free: 1.91 MB / 314.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.001593/0.04903, allocations: 1.194 MB / 394.9 MB, free: 0.6719 MB / 314.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.001819/0.05085, allocations: 1.724 MB / 396.6 MB, free: 14.94 MB / 330.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.001535/0.05239, allocations: 1.146 MB / 397.7 MB, free: 13.79 MB / 330.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0003403/0.05273, allocations: 220 kB / 397.9 MB, free: 13.58 MB / 330.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.004994/0.05772, allocations: 2.483 MB / 400.4 MB, free: 11.09 MB / 330.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0003583/0.05808, allocations: 0.5217 MB / 400.9 MB, free: 10.57 MB / 330.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.0007599/0.05884, allocations: 0.8029 MB / 401.7 MB, free: 9.762 MB / 330.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.007272/0.06611, allocations: 4.692 MB / 406.4 MB, free: 5.051 MB / 330.7 MB
Notification: Performance of FrontEnd - DAE generated: time 3.416e-06/0.06611, allocations: 0 / 406.4 MB, free: 5.051 MB / 330.7 MB
Notification: Performance of FrontEnd: time 1.202e-06/0.06611, allocations: 0 / 406.4 MB, free: 5.051 MB / 330.7 MB
Notification: Performance of Transformations before backend: time 2.335e-05/0.06614, allocations: 0 / 406.4 MB, free: 5.051 MB / 330.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 455
 * Number of variables: 455
Notification: Performance of Generate backend data structure: time 0.003571/0.06971, allocations: 2.76 MB / 409.2 MB, free: 2.238 MB / 330.7 MB
Notification: Performance of prepare preOptimizeDAE: time 5.483e-05/0.06976, allocations: 8.031 kB / 409.2 MB, free: 2.23 MB / 330.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.001474/0.07124, allocations: 0.6847 MB / 409.9 MB, free: 1.543 MB / 330.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.001113/0.07235, allocations: 0.9197 MB / 410.8 MB, free: 0.5898 MB / 330.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0001791/0.07253, allocations: 247 kB / 411.1 MB, free: 332 kB / 330.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0002153/0.07275, allocations: 192.2 kB / 411.2 MB, free: 140 kB / 330.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.145/0.2178, allocations: 1.669 MB / 412.9 MB, free: 65.68 MB / 330.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 3.279e-05/0.2178, allocations: 192 / 412.9 MB, free: 65.68 MB / 330.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001264/0.2179, allocations: 74.88 kB / 413 MB, free: 65.68 MB / 330.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 3.987e-05/0.218, allocations: 47.36 kB / 413 MB, free: 65.68 MB / 330.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.002511/0.2205, allocations: 1.727 MB / 414.8 MB, free: 65.47 MB / 330.7 MB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.006047/0.2265, allocations: 5.086 MB / 419.8 MB, free: 62.88 MB / 330.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.002729/0.2293, allocations: 2.108 MB / 422 MB, free: 62.37 MB / 330.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.000544/0.2298, allocations: 0.5232 MB / 422.5 MB, free: 62.25 MB / 330.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.004402/0.2342, allocations: 4.207 MB / 426.7 MB, free: 59.89 MB / 330.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.399e-05/0.2342, allocations: 54.33 kB / 426.7 MB, free: 59.83 MB / 330.7 MB
Notification: Performance of pre-optimization done (n=122): time 2.164e-06/0.2342, allocations: 0 / 426.7 MB, free: 59.83 MB / 330.7 MB
Notification: Performance of matching and sorting (n=150): time 0.01152/0.2457, allocations: 5.16 MB / 431.9 MB, free: 54.75 MB / 330.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 4.021e-05/0.2458, allocations: 94.42 kB / 432 MB, free: 54.64 MB / 330.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0006472/0.2464, allocations: 0.8863 MB / 432.9 MB, free: 53.76 MB / 330.7 MB
Notification: Performance of collectPreVariables (initialization): time 6.329e-05/0.2465, allocations: 53.7 kB / 432.9 MB, free: 53.7 MB / 330.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0003168/0.2468, allocations: 0.9124 MB / 433.8 MB, free: 52.81 MB / 330.7 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0002567/0.2471, allocations: 0.533 MB / 434.4 MB, free: 52.29 MB / 330.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0002808/0.2473, allocations: 373.1 kB / 434.7 MB, free: 51.91 MB / 330.7 MB
Notification: Performance of setup shared object (initialization): time 8.829e-05/0.2474, allocations: 0.5394 MB / 435.3 MB, free: 51.37 MB / 330.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0004436/0.2479, allocations: 345.3 kB / 435.6 MB, free: 51.03 MB / 330.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.0006593/0.2485, allocations: 1.355 MB / 437 MB, free: 49.21 MB / 330.7 MB
Warning: It was not possible to determine if the initialization problem is consistent, because of not evaluable parameters/start values during compile time: solution_at_constant_temperature.temperature = solution_at_constant_temperature.temperature_start (fixedTemperature.T = solution_at_constant_temperature.temperature_start)
Notification: Performance of analyzeInitialSystem (initialization): time 0.001441/0.25, allocations: 1.893 MB / 438.9 MB, free: 46.88 MB / 330.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 8.576e-06/0.25, allocations: 8 kB / 438.9 MB, free: 46.87 MB / 330.7 MB
Notification: Performance of matching and sorting (n=258) (initialization): time 0.003643/0.2536, allocations: 2.213 MB / 441.1 MB, free: 44.63 MB / 330.7 MB
Notification: Performance of prepare postOptimizeDAE: time 2.338e-05/0.2537, allocations: 16 kB / 441.1 MB, free: 44.62 MB / 330.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.945e-05/0.2537, allocations: 24 kB / 441.1 MB, free: 44.59 MB / 330.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 0.003861/0.2575, allocations: 1.091 MB / 442.2 MB, free: 43.48 MB / 330.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0009152/0.2585, allocations: 0.5293 MB / 442.7 MB, free: 42.96 MB / 330.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.005127/0.2636, allocations: 9.111 MB / 451.9 MB, free: 33.38 MB / 330.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0005907/0.2642, allocations: 71.98 kB / 451.9 MB, free: 33.31 MB / 330.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 8.684e-05/0.2643, allocations: 108 kB / 452 MB, free: 33.21 MB / 330.7 MB
Warning: The initial conditions are over specified. The following 1 initial equations are redundant, so they are removed from the initialization system:
         solution_at_constant_temperature.temperature = solution_at_constant_temperature.temperature_start.
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 107
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (241):
 * Single equations (assignments): 237
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 4
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 2 systems
   {(3,6,77.8%), (1,3,100.0%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 2 systems
   {(1,3), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.0002975/0.2646, allocations: 303.8 kB / 452.3 MB, free: 32.9 MB / 330.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0001807/0.2647, allocations: 183.1 kB / 452.5 MB, free: 32.72 MB / 330.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.003754/0.2685, allocations: 2.172 MB / 454.7 MB, free: 30.48 MB / 330.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 6.101e-06/0.2685, allocations: 12 kB / 454.7 MB, free: 30.46 MB / 330.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 4.519e-06/0.2685, allocations: 4 kB / 454.7 MB, free: 30.46 MB / 330.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.069e-05/0.2685, allocations: 7.922 kB / 454.7 MB, free: 30.45 MB / 330.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.002313/0.2708, allocations: 1.969 MB / 456.7 MB, free: 28.43 MB / 330.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 4.428e-06/0.2708, allocations: 4 kB / 456.7 MB, free: 28.42 MB / 330.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0007864/0.2716, allocations: 303.9 kB / 457 MB, free: 28.12 MB / 330.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 0.004475/0.2761, allocations: 1.22 MB / 458.2 MB, free: 26.89 MB / 330.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 9.092e-05/0.2762, allocations: 39.98 kB / 458.2 MB, free: 26.85 MB / 330.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.005357/0.2815, allocations: 10.71 MB / 468.9 MB, free: 15.55 MB / 330.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 5.911e-06/0.2815, allocations: 11.95 kB / 469 MB, free: 15.54 MB / 330.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.003941/0.2855, allocations: 2.306 MB / 471.3 MB, free: 13.14 MB / 330.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.0001566/0.2856, allocations: 119.1 kB / 471.4 MB, free: 13.03 MB / 330.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001095/0.2857, allocations: 28 kB / 471.4 MB, free: 13 MB / 330.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0003627/0.2861, allocations: 35.98 kB / 471.4 MB, free: 12.96 MB / 330.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0002206/0.2863, allocations: 129 kB / 471.6 MB, free: 12.84 MB / 330.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 5.15e-05/0.2864, allocations: 55.98 kB / 471.6 MB, free: 12.79 MB / 330.7 MB
Notification: Performance of sorting global known variables: time 0.0003666/0.2867, allocations: 0.5135 MB / 472.1 MB, free: 12.26 MB / 330.7 MB
Notification: Performance of sort global known variables: time 8.1e-08/0.2867, allocations: 3.938 kB / 472.1 MB, free: 12.26 MB / 330.7 MB
Notification: Performance of remove unused functions: time 0.002284/0.289, allocations: 1.064 MB / 473.2 MB, free: 11.19 MB / 330.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 12
 * Number of states: 7 (A1.logn,B1.logn,H2O.logn,A.logn,B.logn,H2O1.amountOfBonds,H2O1.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (137):
 * Single equations (assignments): 132
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 5
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 2 systems
   {(1,3,100.0%), (2,7,100.0%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,1), (2,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.001422/0.2905, allocations: 1.16 MB / 474.4 MB, free: 10.15 MB / 330.7 MB
Notification: Performance of simCode: created initialization part: time 0.001883/0.2923, allocations: 1.957 MB / 476.3 MB, free: 8.125 MB / 330.7 MB
Notification: Performance of simCode: created event and clocks part: time 3.987e-06/0.2923, allocations: 0 / 476.3 MB, free: 8.125 MB / 330.7 MB
Notification: Performance of simCode: created simulation system equations: time 0.00103/0.2934, allocations: 1.483 MB / 477.8 MB, free: 6.551 MB / 330.7 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0009682/0.2943, allocations: 349.1 kB / 478.1 MB, free: 6.215 MB / 330.7 MB
Error: Error parsing unit kDa: Unit not found
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.003646/0.298, allocations: 2.806 MB / 480.9 MB, free: 3.324 MB / 330.7 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0001764/0.2982, allocations: 292.5 kB / 481.2 MB, free: 3.012 MB / 330.7 MB
Notification: Performance of simCode: alias equations: time 0.0006365/0.2988, allocations: 314.9 kB / 481.5 MB, free: 2.699 MB / 330.7 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0002525/0.2991, allocations: 200.4 kB / 481.7 MB, free: 2.504 MB / 330.7 MB
Notification: Performance of SimCode: time 1.283e-06/0.2991, allocations: 0 / 481.7 MB, free: 2.504 MB / 330.7 MB
Notification: Performance of Templates: time 0.03955/0.3386, allocations: 38.3 MB / 0.5078 GB, free: 12.49 MB / 378.7 MB
"
[Timeout remaining time 660]
make -j1 -f Chemical_Chemical.Obsolete.Examples.ExothermicReaction.makefile [Timeout 660]
(rm -f Chemical_Chemical.Obsolete.Examples.ExothermicReaction.pipe ; mkfifo Chemical_Chemical.Obsolete.Examples.ExothermicReaction.pipe ; head -c 1048576 < Chemical_Chemical.Obsolete.Examples.ExothermicReaction.pipe >> ../files/Chemical_Chemical.Obsolete.Examples.ExothermicReaction.sim & ./Chemical_Chemical.Obsolete.Examples.ExothermicReaction -abortSlowSimulation -alarm=240  -lv LOG_STATS > Chemical_Chemical.Obsolete.Examples.ExothermicReaction.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 4.211741578066722]