Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0009302/0.0009302, allocations: 80.88 kB / 20.8 MB, free: 3.66 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001055/0.001055, allocations: 165 kB / 24.22 MB, free: 244 kB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.037/1.037, allocations: 177.1 MB / 204.7 MB, free: 5.453 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo): time 0.06682/0.06682, allocations: 12.76 MB / 273.9 MB, free: 128 kB / 250.7 MB
"
[Timeout remaining time 180]
Using package Bodylight with version 1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC")
translateModel(Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.453e-06/1.453e-06, allocations: 0 / 295 MB, free: 11.77 MB / 266.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 2.134e-05/2.279e-05, allocations: 2.312 kB / 295 MB, free: 11.77 MB / 266.7 MB
Notification: Performance of NFInst.instantiate(Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC): time 0.008912/0.008934, allocations: 10.47 MB / 305.5 MB, free: 4.656 MB / 266.7 MB
Notification: Performance of NFInst.instExpressions: time 0.01552/0.02446, allocations: 11.23 MB / 316.7 MB, free: 11.14 MB / 282.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.002434/0.02689, allocations: 102.9 kB / 316.8 MB, free: 11.04 MB / 282.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.0007864/0.02768, allocations: 408 kB / 317.2 MB, free: 10.64 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T0.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T0.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T0.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T1.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T1.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T1.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R1.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R1.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R1.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T2.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T2.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T2.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R2.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R2.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R2.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T3.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T3.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T3.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R3.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R3.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R3.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T4.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T4.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T4.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R4.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R4.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R4.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R0.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R0.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R0.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit'.
Notification: Performance of NFTyping.typeBindings: time 0.005561/0.03324, allocations: 2.137 MB / 319.4 MB, free: 8.492 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T0.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T0.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T1.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T1.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R1.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R1.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T2.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T2.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R2.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R2.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T3.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T3.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R3.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R3.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T4.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T4.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R4.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R4.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R0.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R0.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
Notification: Performance of NFTyping.typeClassSections: time 0.004569/0.03781, allocations: 1.964 MB / 321.3 MB, free: 6.535 MB / 282.7 MB
Notification: Performance of NFFlatten.flatten: time 0.003307/0.04112, allocations: 2.869 MB / 324.2 MB, free: 3.652 MB / 282.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0006868/0.0418, allocations: 412.5 kB / 324.6 MB, free: 3.211 MB / 282.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.001758/0.04356, allocations: 1.375 MB / 326 MB, free: 1.832 MB / 282.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.001491/0.04505, allocations: 1.208 MB / 327.2 MB, free: 0.6211 MB / 282.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0007107/0.04576, allocations: 144 kB / 327.3 MB, free: 492 kB / 282.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.0004177/0.04618, allocations: 156 kB / 327.5 MB, free: 336 kB / 282.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0003736/0.04655, allocations: 0.5448 MB / 328 MB, free: 15.78 MB / 298.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.0005726/0.04713, allocations: 0.7051 MB / 328.7 MB, free: 15.07 MB / 298.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.001456/0.04858, allocations: 1.88 MB / 330.6 MB, free: 13.19 MB / 298.7 MB
Notification: Performance of FrontEnd - DAE generated: time 3.887e-06/0.04859, allocations: 0 / 330.6 MB, free: 13.19 MB / 298.7 MB
Notification: Performance of FrontEnd: time 1.423e-06/0.04859, allocations: 0 / 330.6 MB, free: 13.19 MB / 298.7 MB
Notification: Performance of Transformations before backend: time 2.953e-05/0.04862, allocations: 0 / 330.6 MB, free: 13.19 MB / 298.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 287
 * Number of variables: 287
Notification: Performance of Generate backend data structure: time 0.00283/0.05145, allocations: 2.435 MB / 333 MB, free: 10.71 MB / 298.7 MB
Notification: Performance of prepare preOptimizeDAE: time 4.577e-05/0.05149, allocations: 11.98 kB / 333.1 MB, free: 10.7 MB / 298.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0006503/0.05214, allocations: 328.6 kB / 333.4 MB, free: 10.38 MB / 298.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.00157/0.05371, allocations: 1.176 MB / 334.6 MB, free: 9.164 MB / 298.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 4.986e-05/0.05376, allocations: 90.64 kB / 334.6 MB, free: 9.074 MB / 298.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.000104/0.05387, allocations: 120.4 kB / 334.8 MB, free: 8.957 MB / 298.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.0007824/0.05465, allocations: 0.8067 MB / 335.6 MB, free: 8.105 MB / 298.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 1.948e-05/0.05467, allocations: 3.938 kB / 335.6 MB, free: 8.102 MB / 298.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 5.762e-05/0.05473, allocations: 44 kB / 335.6 MB, free: 8.059 MB / 298.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 1.669e-05/0.05474, allocations: 31.94 kB / 335.6 MB, free: 8.027 MB / 298.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0004736/0.05522, allocations: 362.6 kB / 336 MB, free: 7.66 MB / 298.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.003327/0.05854, allocations: 2.525 MB / 338.5 MB, free: 5.078 MB / 298.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.0004257/0.05897, allocations: 432.5 kB / 338.9 MB, free: 4.637 MB / 298.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0002076/0.05918, allocations: 187.6 kB / 339.1 MB, free: 4.449 MB / 298.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 4.26e-05/0.05922, allocations: 17 kB / 339.1 MB, free: 4.434 MB / 298.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.74e-05/0.05925, allocations: 51.44 kB / 339.2 MB, free: 4.375 MB / 298.7 MB
Notification: Performance of pre-optimization done (n=98): time 2.775e-06/0.05925, allocations: 4 kB / 339.2 MB, free: 4.371 MB / 298.7 MB
Notification: Performance of matching and sorting (n=98): time 0.0125/0.07175, allocations: 4.286 MB / 343.5 MB, free: 64 kB / 298.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 5.523e-05/0.07181, allocations: 94.03 kB / 343.6 MB, free: 15.95 MB / 314.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.001093/0.0729, allocations: 1.377 MB / 345 MB, free: 14.54 MB / 314.7 MB
Notification: Performance of collectPreVariables (initialization): time 5.484e-05/0.07295, allocations: 45.7 kB / 345 MB, free: 14.48 MB / 314.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0003388/0.07329, allocations: 0.6241 MB / 345.6 MB, free: 13.85 MB / 314.7 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0002909/0.07358, allocations: 352.9 kB / 346 MB, free: 13.5 MB / 314.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0003073/0.07389, allocations: 247.3 kB / 346.2 MB, free: 13.25 MB / 314.7 MB
Notification: Performance of setup shared object (initialization): time 0.0001205/0.07401, allocations: 365.8 kB / 346.6 MB, free: 12.89 MB / 314.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0002657/0.07428, allocations: 138.8 kB / 346.7 MB, free: 12.75 MB / 314.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.0004711/0.07475, allocations: 0.5111 MB / 347.2 MB, free: 12.08 MB / 314.7 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.0008553/0.0756, allocations: 0.7746 MB / 348 MB, free: 11.14 MB / 314.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 9.347e-06/0.07561, allocations: 8 kB / 348 MB, free: 11.14 MB / 314.7 MB
Notification: Performance of matching and sorting (n=173) (initialization): time 0.01306/0.08868, allocations: 1.392 MB / 349.4 MB, free: 9.73 MB / 314.7 MB
Notification: Performance of prepare postOptimizeDAE: time 3.008e-05/0.08871, allocations: 8 kB / 349.4 MB, free: 9.723 MB / 314.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 2.091e-05/0.08873, allocations: 12 kB / 349.4 MB, free: 9.711 MB / 314.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 0.008007/0.09673, allocations: 1.136 MB / 350.5 MB, free: 8.57 MB / 314.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.003738/0.1005, allocations: 235.6 kB / 350.8 MB, free: 8.34 MB / 314.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.01441/0.1149, allocations: 4.324 MB / 355.1 MB, free: 3.949 MB / 314.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.004101/0.119, allocations: 151 kB / 355.2 MB, free: 3.801 MB / 314.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 8.502e-05/0.1191, allocations: 47.98 kB / 355.3 MB, free: 3.754 MB / 314.7 MB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 52
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (115):
 * Single equations (assignments): 114
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 1
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 0 systems
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(10,49)}
Notification: Performance of prepare postOptimizeDAE: time 0.0003656/0.1194, allocations: 184.3 kB / 355.5 MB, free: 3.562 MB / 314.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0002149/0.1197, allocations: 135.8 kB / 355.6 MB, free: 3.43 MB / 314.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.0004909/0.1201, allocations: 227.7 kB / 355.8 MB, free: 3.199 MB / 314.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 7.694e-06/0.1202, allocations: 12 kB / 355.8 MB, free: 3.188 MB / 314.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 5.2e-06/0.1202, allocations: 4 kB / 355.8 MB, free: 3.184 MB / 314.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 8.637e-06/0.1202, allocations: 3.984 kB / 355.8 MB, free: 3.18 MB / 314.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.004114/0.1243, allocations: 0.6983 MB / 356.5 MB, free: 2.461 MB / 314.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 1.083e-05/0.1243, allocations: 3.984 kB / 356.6 MB, free: 2.457 MB / 314.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0003213/0.1246, allocations: 91.89 kB / 356.6 MB, free: 2.367 MB / 314.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 0.007648/0.1323, allocations: 1.111 MB / 357.8 MB, free: 1.25 MB / 314.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 9.885e-05/0.1324, allocations: 19.94 kB / 357.8 MB, free: 1.23 MB / 314.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.009776/0.1421, allocations: 4.165 MB / 361.9 MB, free: 12.97 MB / 330.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.874e-06/0.1421, allocations: 0 / 361.9 MB, free: 12.97 MB / 330.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.003085/0.1452, allocations: 1.467 MB / 363.4 MB, free: 11.48 MB / 330.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.0004735/0.1457, allocations: 236.9 kB / 363.6 MB, free: 11.24 MB / 330.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 9.941e-05/0.1458, allocations: 20 kB / 363.7 MB, free: 11.22 MB / 330.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0003514/0.1461, allocations: 31.94 kB / 363.7 MB, free: 11.19 MB / 330.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.000135/0.1463, allocations: 85.3 kB / 363.8 MB, free: 11.11 MB / 330.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 3.031e-05/0.1463, allocations: 23.98 kB / 363.8 MB, free: 11.08 MB / 330.7 MB
Notification: Performance of sorting global known variables: time 0.0005309/0.1468, allocations: 0.7004 MB / 364.5 MB, free: 10.36 MB / 330.7 MB
Notification: Performance of sort global known variables: time 7e-08/0.1468, allocations: 0 / 364.5 MB, free: 10.36 MB / 330.7 MB
Notification: Performance of remove unused functions: time 0.001223/0.1481, allocations: 0.6557 MB / 365.1 MB, free: 9.699 MB / 330.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 2
 * Number of states: 1 (hemoglobinConservationLaw.state[1])
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (40):
 * Single equations (assignments): 39
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 1
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 0 systems
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(10,49)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.000179/0.1482, allocations: 92.36 kB / 365.2 MB, free: 9.602 MB / 330.7 MB
Notification: Performance of simCode: created initialization part: time 0.001999/0.1502, allocations: 1.185 MB / 366.4 MB, free: 8.406 MB / 330.7 MB
Notification: Performance of simCode: created event and clocks part: time 2.578e-05/0.1503, allocations: 24.44 kB / 366.4 MB, free: 8.383 MB / 330.7 MB
Notification: Performance of simCode: created simulation system equations: time 0.00126/0.1515, allocations: 0.8617 MB / 367.3 MB, free: 7.5 MB / 330.7 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0008753/0.1524, allocations: 334 kB / 367.6 MB, free: 7.18 MB / 330.7 MB
Error: Error parsing unit kcal/min: Unit not found
Error: Error parsing unit kcal: Unit not found
Error: Error parsing unit kcal/mol: Unit not found
Error: Error parsing unit %: Parse error
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.004083/0.1565, allocations: 2.824 MB / 370.5 MB, free: 4.316 MB / 330.7 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0003008/0.1568, allocations: 399.3 kB / 370.8 MB, free: 3.902 MB / 330.7 MB
Notification: Performance of simCode: alias equations: time 0.0003424/0.1571, allocations: 143 kB / 371 MB, free: 3.758 MB / 330.7 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0004125/0.1575, allocations: 313.1 kB / 371.3 MB, free: 3.449 MB / 330.7 MB
Notification: Performance of SimCode: time 1.903e-06/0.1575, allocations: 0 / 371.3 MB, free: 3.449 MB / 330.7 MB
Notification: Performance of Templates: time 0.0447/0.2022, allocations: 39.92 MB / 411.2 MB, free: 11.89 MB / 378.7 MB
"
[Timeout remaining time 660]
make -j1 -f Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.makefile [Timeout 660]
(rm -f Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.pipe ; mkfifo Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.pipe ; head -c 1048576 < Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.pipe >> ../files/Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.sim & ./Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC -abortSlowSimulation -alarm=240  -lv LOG_STATS > Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 4.229714071378112]