Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001051/0.001051, allocations: 80.88 kB / 20.8 MB, free: 3.66 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.0008979/0.0008979, allocations: 165 kB / 24.22 MB, free: 248 kB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.014/1.014, allocations: 177.1 MB / 204.7 MB, free: 5.469 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo): time 0.07338/0.07338, allocations: 12.76 MB / 273.9 MB, free: 144 kB / 250.7 MB
"
[Timeout remaining time 180]
Using package Bodylight with version 1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Bodylight.Chemical.Examples.TwoConcentrationCompartments,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments")
translateModel(Bodylight.Chemical.Examples.TwoConcentrationCompartments,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.403e-06/1.403e-06, allocations: 0 / 294.9 MB, free: 11.94 MB / 266.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 2.021e-05/2.161e-05, allocations: 4.5 kB / 294.9 MB, free: 11.94 MB / 266.7 MB
Notification: Performance of NFInst.instantiate(Bodylight.Chemical.Examples.TwoConcentrationCompartments): time 0.003854/0.003875, allocations: 3.794 MB / 298.7 MB, free: 9.391 MB / 266.7 MB
Notification: Performance of NFInst.instExpressions: time 0.004116/0.007992, allocations: 3.059 MB / 301.7 MB, free: 7.461 MB / 266.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.0002466/0.008238, allocations: 19.56 kB / 301.7 MB, free: 7.449 MB / 266.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.000205/0.008443, allocations: 68.48 kB / 301.8 MB, free: 7.406 MB / 266.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance1.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance1.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance1.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Hydraulic.mo:1482:17-1484:29:writable] Warning: In relation resistor.Resistance == 0.0, == on Real operands is deprecated in non-function contexts.
Notification: Performance of NFTyping.typeBindings: time 0.001315/0.009758, allocations: 489.6 kB / 302.3 MB, free: 7.125 MB / 266.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance1.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance1.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
Notification: Performance of NFTyping.typeClassSections: time 0.001217/0.01097, allocations: 0.4979 MB / 302.8 MB, free: 6.883 MB / 266.7 MB
Notification: Performance of NFFlatten.flatten: time 0.003706/0.01468, allocations: 5.111 MB / 307.9 MB, free: 4.016 MB / 266.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0001802/0.01486, allocations: 79.75 kB / 308 MB, free: 3.957 MB / 266.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.002731/0.01759, allocations: 1.92 MB / 309.9 MB, free: 2.035 MB / 266.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.002345/0.01994, allocations: 1.67 MB / 311.6 MB, free: 372 kB / 266.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0008323/0.02077, allocations: 288 kB / 311.8 MB, free: 84 kB / 266.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.0004812/0.02125, allocations: 292 kB / 312.1 MB, free: 15.79 MB / 282.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0006999/0.02195, allocations: 0.9999 MB / 313.1 MB, free: 14.79 MB / 282.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.001147/0.0231, allocations: 0.9285 MB / 314.1 MB, free: 13.86 MB / 282.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.002897/0.02599, allocations: 2.635 MB / 316.7 MB, free: 11.22 MB / 282.7 MB
Notification: Performance of FrontEnd - DAE generated: time 6.622e-06/0.026, allocations: 0 / 316.7 MB, free: 11.22 MB / 282.7 MB
Notification: Performance of FrontEnd: time 1.533e-06/0.026, allocations: 0 / 316.7 MB, free: 11.22 MB / 282.7 MB
Notification: Performance of Transformations before backend: time 2.798e-05/0.02603, allocations: 0 / 316.7 MB, free: 11.22 MB / 282.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 164
 * Number of variables: 164
Notification: Performance of Generate backend data structure: time 0.009326/0.03536, allocations: 3.462 MB / 320.2 MB, free: 7.723 MB / 282.7 MB
Notification: Performance of prepare preOptimizeDAE: time 4.718e-05/0.0354, allocations: 23.91 kB / 320.2 MB, free: 7.699 MB / 282.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0004961/0.0359, allocations: 248.7 kB / 320.4 MB, free: 7.457 MB / 282.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.00123/0.03713, allocations: 0.6702 MB / 321.1 MB, free: 6.754 MB / 282.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.001178/0.03831, allocations: 2.832 MB / 323.9 MB, free: 3.285 MB / 282.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0004121/0.03872, allocations: 144.1 kB / 324.1 MB, free: 3.145 MB / 282.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.00219/0.04091, allocations: 1.387 MB / 325.5 MB, free: 1.73 MB / 282.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 2.355e-05/0.04093, allocations: 0 / 325.5 MB, free: 1.73 MB / 282.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001946/0.04113, allocations: 32 kB / 325.5 MB, free: 1.699 MB / 282.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 1.759e-05/0.04115, allocations: 16 kB / 325.5 MB, free: 1.684 MB / 282.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.001124/0.04227, allocations: 0.5465 MB / 326 MB, free: 1.137 MB / 282.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.01046/0.05273, allocations: 3.802 MB / 329.8 MB, free: 13.31 MB / 298.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.0009629/0.0537, allocations: 0.6573 MB / 330.5 MB, free: 12.64 MB / 298.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0007677/0.05446, allocations: 0.6022 MB / 331.1 MB, free: 12.03 MB / 298.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.0002342/0.0547, allocations: 21 kB / 331.1 MB, free: 12.01 MB / 298.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.001579/0.05628, allocations: 1.255 MB / 332.4 MB, free: 10.72 MB / 298.7 MB
Notification: Performance of pre-optimization done (n=123): time 3.466e-06/0.05628, allocations: 0 / 332.4 MB, free: 10.72 MB / 298.7 MB
Notification: Performance of matching and sorting (n=123): time 0.002821/0.0591, allocations: 1.743 MB / 334.1 MB, free: 8.969 MB / 298.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 5.547e-05/0.05916, allocations: 94.11 kB / 334.2 MB, free: 8.859 MB / 298.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0003721/0.05953, allocations: 0.5233 MB / 334.7 MB, free: 8.324 MB / 298.7 MB
Notification: Performance of collectPreVariables (initialization): time 0.0002243/0.05975, allocations: 61.7 kB / 334.8 MB, free: 8.258 MB / 298.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0001334/0.05989, allocations: 236.6 kB / 335 MB, free: 8.02 MB / 298.7 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0004047/0.06029, allocations: 0.5695 MB / 335.6 MB, free: 7.445 MB / 298.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0006044/0.0609, allocations: 319.4 kB / 335.9 MB, free: 7.129 MB / 298.7 MB
Notification: Performance of setup shared object (initialization): time 0.000106/0.061, allocations: 361.8 kB / 336.3 MB, free: 6.77 MB / 298.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0008381/0.06184, allocations: 0.5707 MB / 336.8 MB, free: 6.191 MB / 298.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.0008902/0.06273, allocations: 0.6958 MB / 337.5 MB, free: 5.477 MB / 298.7 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.002815/0.06555, allocations: 1.963 MB / 339.5 MB, free: 3.488 MB / 298.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 4.899e-06/0.06555, allocations: 0 / 339.5 MB, free: 3.488 MB / 298.7 MB
Notification: Performance of matching and sorting (n=237) (initialization): time 0.002195/0.06775, allocations: 1.526 MB / 341 MB, free: 1.945 MB / 298.7 MB
Notification: Performance of prepare postOptimizeDAE: time 4.184e-05/0.06779, allocations: 37.7 kB / 341.1 MB, free: 1.902 MB / 298.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 9.227e-06/0.0678, allocations: 0 / 341.1 MB, free: 1.902 MB / 298.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 1.974e-05/0.06782, allocations: 15.98 kB / 341.1 MB, free: 1.887 MB / 298.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0412/0.109, allocations: 5.301 MB / 346.4 MB, free: 12.58 MB / 314.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 1.609e-05/0.109, allocations: 8 kB / 346.4 MB, free: 12.57 MB / 314.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.003001/0.112, allocations: 246.9 kB / 346.6 MB, free: 12.33 MB / 314.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0003139/0.1123, allocations: 43.98 kB / 346.7 MB, free: 12.29 MB / 314.7 MB
Warning: Assuming fixed start value for the following 1 variables:
         inertia.q_in.q:VARIABLE(flow=true start = advectionStream.SolutionFlow unit = \"m3/s\" fixed = true nominal = 1.6666666666666667e-8 )  \"Volume flow\" type: Real
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 6
 * Number of states: 0 ()
 * Number of discrete variables: 5 (pulse.count,$PRE.pulse.count,pulse.T_start,$PRE.pulse.T_start,$whenCondition1)
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (236):
 * Single equations (assignments): 235
 * Array equations: 0
 * Algorithm blocks: 1
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of prepare postOptimizeDAE: time 0.0006836/0.113, allocations: 197.8 kB / 346.9 MB, free: 12.09 MB / 314.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.000389/0.1134, allocations: 99.86 kB / 347 MB, free: 11.99 MB / 314.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.00255/0.116, allocations: 1.605 MB / 348.6 MB, free: 10.37 MB / 314.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.053e-05/0.116, allocations: 12 kB / 348.6 MB, free: 10.36 MB / 314.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 3.327e-06/0.116, allocations: 0 / 348.6 MB, free: 10.36 MB / 314.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.18e-05/0.116, allocations: 7.969 kB / 348.6 MB, free: 10.35 MB / 314.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.002601/0.1186, allocations: 1.369 MB / 350 MB, free: 8.957 MB / 314.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 5.11e-06/0.1186, allocations: 0 / 350 MB, free: 8.957 MB / 314.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.04239/0.161, allocations: 5.256 MB / 355.2 MB, free: 3.695 MB / 314.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 6.652e-06/0.161, allocations: 4 kB / 355.2 MB, free: 3.691 MB / 314.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0009037/0.1619, allocations: 79.92 kB / 355.3 MB, free: 3.613 MB / 314.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 5.25e-06/0.1619, allocations: 4 kB / 355.3 MB, free: 3.609 MB / 314.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.353e-06/0.1619, allocations: 0 / 355.3 MB, free: 3.609 MB / 314.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.003277/0.1652, allocations: 2.194 MB / 357.5 MB, free: 1.395 MB / 314.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.0006784/0.1659, allocations: 278.8 kB / 357.8 MB, free: 1.121 MB / 314.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0002963/0.1662, allocations: 71.94 kB / 357.8 MB, free: 1.051 MB / 314.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.001472/0.1676, allocations: 143.8 kB / 358 MB, free: 0.9102 MB / 314.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0003318/0.168, allocations: 132.8 kB / 358.1 MB, free: 0.7773 MB / 314.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.0001279/0.1681, allocations: 27.97 kB / 358.1 MB, free: 0.75 MB / 314.7 MB
Notification: Performance of sorting global known variables: time 0.0001701/0.1683, allocations: 228.6 kB / 358.4 MB, free: 0.5273 MB / 314.7 MB
Notification: Performance of sort global known variables: time 5e-08/0.1683, allocations: 4 kB / 358.4 MB, free: 0.5234 MB / 314.7 MB
Notification: Performance of remove unused functions: time 0.001246/0.1695, allocations: 0.6093 MB / 359 MB, free: 15.91 MB / 330.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 2
 * Number of states: 103 (substance.state,substance1.state,advectionStream.c[2],advectionStream.c[3],advectionStream.c[4],advectionStream.c[5],advectionStream.c[6],advectionStream.c[7],advectionStream.c[8],advectionStream.c[9],advectionStream.c[10],advectionStream.c[11],advectionStream.c[12],advectionStream.c[13],advectionStream.c[14],advectionStream.c[15],advectionStream.c[16],advectionStream.c[17],advectionStream.c[18],advectionStream.c[19],advectionStream.c[20],advectionStream.c[21],advectionStream.c[22],advectionStream.c[23],advectionStream.c[24],advectionStream.c[25],advectionStream.c[26],advectionStream.c[27],advectionStream.c[28],advectionStream.c[29],advectionStream.c[30],advectionStream.c[31],advectionStream.c[32],advectionStream.c[33],advectionStream.c[34],advectionStream.c[35],advectionStream.c[36],advectionStream.c[37],advectionStream.c[38],advectionStream.c[39],advectionStream.c[40],advectionStream.c[41],advectionStream.c[42],advectionStream.c[43],advectionStream.c[44],advectionStream.c[45],advectionStream.c[46],advectionStream.c[47],advectionStream.c[48],advectionStream.c[49],advectionStream.c[50],advectionStream.c[51],advectionStream.c[52],advectionStream.c[53],advectionStream.c[54],advectionStream.c[55],advectionStream.c[56],advectionStream.c[57],advectionStream.c[58],advectionStream.c[59],advectionStream.c[60],advectionStream.c[61],advectionStream.c[62],advectionStream.c[63],advectionStream.c[64],advectionStream.c[65],advectionStream.c[66],advectionStream.c[67],advectionStream.c[68],advectionStream.c[69],advectionStream.c[70],advectionStream.c[71],advectionStream.c[72],advectionStream.c[73],advectionStream.c[74],advectionStream.c[75],advectionStream.c[76],advectionStream.c[77],advectionStream.c[78],advectionStream.c[79],advectionStream.c[80],advectionStream.c[81],advectionStream.c[82],advectionStream.c[83],advectionStream.c[84],advectionStream.c[85],advectionStream.c[86],advectionStream.c[87],advectionStream.c[88],advectionStream.c[89],advectionStream.c[90],advectionStream.c[91],advectionStream.c[92],advectionStream.c[93],advectionStream.c[94],advectionStream.c[95],advectionStream.c[96],advectionStream.c[97],advectionStream.c[98],advectionStream.c[99],elasticVessel.volume,elasticVessel1.volume,inertia.q_in.q)
 * Number of discrete variables: 3 ($whenCondition1,pulse.T_start,pulse.count)
 * Number of discrete states: 1 (pulse.count)
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (123):
 * Single equations (assignments): 121
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 2
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of Backend phase and start with SimCode phase: time 0.0003165/0.1698, allocations: 177 kB / 359.1 MB, free: 15.72 MB / 330.7 MB
Notification: Performance of simCode: created initialization part: time 0.002229/0.1721, allocations: 1.457 MB / 360.6 MB, free: 14.25 MB / 330.7 MB
Notification: Performance of simCode: created event and clocks part: time 8.997e-06/0.1721, allocations: 4 kB / 360.6 MB, free: 14.25 MB / 330.7 MB
Notification: Performance of simCode: created simulation system equations: time 0.001428/0.1735, allocations: 0.7114 MB / 361.3 MB, free: 13.54 MB / 330.7 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.001075/0.1746, allocations: 0.5733 MB / 361.9 MB, free: 12.98 MB / 330.7 MB
Error: Error parsing unit kcal: Unit not found
Error: Error parsing unit kcal/mol: Unit not found
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.004521/0.1791, allocations: 4.012 MB / 365.9 MB, free: 8.922 MB / 330.7 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0001693/0.1793, allocations: 275.1 kB / 366.2 MB, free: 8.629 MB / 330.7 MB
Notification: Performance of simCode: alias equations: time 0.002258/0.1815, allocations: 333.2 kB / 366.5 MB, free: 8.301 MB / 330.7 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.001882/0.1834, allocations: 495 kB / 367 MB, free: 7.809 MB / 330.7 MB
Notification: Performance of SimCode: time 1.874e-06/0.1834, allocations: 3.938 kB / 367 MB, free: 7.805 MB / 330.7 MB
Notification: Performance of Templates: time 0.04563/0.229, allocations: 46.4 MB / 413.4 MB, free: 9.953 MB / 378.7 MB
"
[Timeout remaining time 660]
make -j1 -f Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.makefile [Timeout 660]
(rm -f Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.pipe ; mkfifo Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.pipe ; head -c 1048576 < Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.pipe >> ../files/Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.sim & ./Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments -abortSlowSimulation -alarm=240  -lv LOG_STATS > Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 4.0908673061057925]