Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001039/0.001039, allocations: 81.53 kB / 20.8 MB, free: 3.66 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001081/0.001081, allocations: 169.4 kB / 24.22 MB, free: 244 kB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9647/0.9647, allocations: 177.1 MB / 204.7 MB, free: 5.441 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo): time 0.08426/0.08426, allocations: 12.76 MB / 273.9 MB, free: 116 kB / 250.7 MB
"
[Timeout remaining time 180]
Using package Bodylight with version 1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC,tolerance=1e-14,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC")
translateModel(Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC,tolerance=1e-14,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.463e-06/1.463e-06, allocations: 0 / 294.9 MB, free: 11.87 MB / 266.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 2.246e-05/2.393e-05, allocations: 4.75 kB / 294.9 MB, free: 11.86 MB / 266.7 MB
Notification: Performance of NFInst.instantiate(Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC): time 0.008211/0.008235, allocations: 10.45 MB / 305.4 MB, free: 4.77 MB / 266.7 MB
Notification: Performance of NFInst.instExpressions: time 0.01328/0.02151, allocations: 11.31 MB / 316.7 MB, free: 11.19 MB / 282.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.00233/0.02384, allocations: 102.9 kB / 316.8 MB, free: 11.09 MB / 282.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.001136/0.02498, allocations: 408 kB / 317.2 MB, free: 10.68 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T0.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T0.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T0.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T1.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T1.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T1.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R1.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R1.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R1.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T2.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T2.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T2.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R2.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R2.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R2.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T3.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T3.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T3.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R3.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R3.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R3.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T4.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T4.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T4.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R4.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R4.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R4.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R0.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R0.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R0.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit'.
Notification: Performance of NFTyping.typeBindings: time 0.00603/0.03101, allocations: 2.133 MB / 319.3 MB, free: 8.539 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T0.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T0.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T1.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T1.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R1.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R1.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T2.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T2.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R2.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R2.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T3.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T3.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R3.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R3.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T4.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T4.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R4.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R4.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R0.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R0.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
Notification: Performance of NFTyping.typeClassSections: time 0.004563/0.03557, allocations: 1.965 MB / 321.3 MB, free: 6.582 MB / 282.7 MB
Notification: Performance of NFFlatten.flatten: time 0.00402/0.03959, allocations: 2.873 MB / 324.1 MB, free: 3.695 MB / 282.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0007023/0.04029, allocations: 404.6 kB / 324.5 MB, free: 3.262 MB / 282.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.001799/0.04209, allocations: 1.368 MB / 325.9 MB, free: 1.891 MB / 282.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.001581/0.04367, allocations: 1.215 MB / 327.1 MB, free: 0.6719 MB / 282.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0003878/0.04406, allocations: 148 kB / 327.3 MB, free: 0.5273 MB / 282.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.0004037/0.04447, allocations: 156 kB / 327.4 MB, free: 384 kB / 282.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0004331/0.0449, allocations: 0.5566 MB / 328 MB, free: 15.81 MB / 298.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.0008008/0.0457, allocations: 0.705 MB / 328.7 MB, free: 15.11 MB / 298.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.001787/0.04749, allocations: 1.881 MB / 330.6 MB, free: 13.22 MB / 298.7 MB
Notification: Performance of FrontEnd - DAE generated: time 4.117e-06/0.04749, allocations: 0 / 330.6 MB, free: 13.22 MB / 298.7 MB
Notification: Performance of FrontEnd: time 1.573e-06/0.04749, allocations: 0 / 330.6 MB, free: 13.22 MB / 298.7 MB
Notification: Performance of Transformations before backend: time 3.651e-05/0.04753, allocations: 0 / 330.6 MB, free: 13.22 MB / 298.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 287
 * Number of variables: 287
Notification: Performance of Generate backend data structure: time 0.003484/0.05101, allocations: 2.451 MB / 333 MB, free: 10.73 MB / 298.7 MB
Notification: Performance of prepare preOptimizeDAE: time 4.292e-05/0.05106, allocations: 11.98 kB / 333 MB, free: 10.72 MB / 298.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0008551/0.05191, allocations: 332.6 kB / 333.3 MB, free: 10.4 MB / 298.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.001723/0.05363, allocations: 1.188 MB / 334.5 MB, free: 9.168 MB / 298.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 6.27e-05/0.0537, allocations: 90.64 kB / 334.6 MB, free: 9.078 MB / 298.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0001397/0.05384, allocations: 116.4 kB / 334.7 MB, free: 8.965 MB / 298.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.001035/0.05487, allocations: 0.8145 MB / 335.5 MB, free: 8.105 MB / 298.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 2.341e-05/0.05489, allocations: 3.938 kB / 335.6 MB, free: 8.102 MB / 298.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 7.365e-05/0.05497, allocations: 44 kB / 335.6 MB, free: 8.059 MB / 298.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 2.363e-05/0.05499, allocations: 28 kB / 335.6 MB, free: 8.031 MB / 298.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0006525/0.05564, allocations: 362.6 kB / 336 MB, free: 7.664 MB / 298.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.004673/0.06032, allocations: 2.517 MB / 338.5 MB, free: 5.09 MB / 298.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.0005573/0.06087, allocations: 431.8 kB / 338.9 MB, free: 4.645 MB / 298.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0002674/0.06114, allocations: 183.6 kB / 339.1 MB, free: 4.461 MB / 298.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 5.925e-05/0.0612, allocations: 24.92 kB / 339.1 MB, free: 4.438 MB / 298.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 3.522e-05/0.06124, allocations: 51.5 kB / 339.2 MB, free: 4.379 MB / 298.7 MB
Notification: Performance of pre-optimization done (n=98): time 2.966e-06/0.06124, allocations: 0 / 339.2 MB, free: 4.379 MB / 298.7 MB
Notification: Performance of matching and sorting (n=98): time 0.0165/0.07774, allocations: 4.287 MB / 343.5 MB, free: 76 kB / 298.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 6.069e-05/0.0778, allocations: 94.05 kB / 343.5 MB, free: 15.96 MB / 314.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.001363/0.07916, allocations: 1.389 MB / 344.9 MB, free: 14.54 MB / 314.7 MB
Notification: Performance of collectPreVariables (initialization): time 5.33e-05/0.07921, allocations: 45.7 kB / 345 MB, free: 14.48 MB / 314.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0005914/0.0798, allocations: 0.6163 MB / 345.6 MB, free: 13.86 MB / 314.7 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0002486/0.08005, allocations: 360.9 kB / 345.9 MB, free: 13.5 MB / 314.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0003122/0.08036, allocations: 247.4 kB / 346.2 MB, free: 13.25 MB / 314.7 MB
Notification: Performance of setup shared object (initialization): time 0.0001194/0.08048, allocations: 365.8 kB / 346.5 MB, free: 12.89 MB / 314.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0002682/0.08075, allocations: 134.8 kB / 346.7 MB, free: 12.76 MB / 314.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.000444/0.0812, allocations: 0.5111 MB / 347.2 MB, free: 12.09 MB / 314.7 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.000849/0.08204, allocations: 0.7785 MB / 348 MB, free: 11.14 MB / 314.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.012e-05/0.08205, allocations: 8 kB / 348 MB, free: 11.14 MB / 314.7 MB
Notification: Performance of matching and sorting (n=173) (initialization): time 0.003476/0.08553, allocations: 1.388 MB / 349.4 MB, free: 9.734 MB / 314.7 MB
Notification: Performance of prepare postOptimizeDAE: time 2.466e-05/0.08556, allocations: 20 kB / 349.4 MB, free: 9.715 MB / 314.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.879e-05/0.08557, allocations: 12 kB / 349.4 MB, free: 9.703 MB / 314.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 0.004006/0.08958, allocations: 1.159 MB / 350.6 MB, free: 8.539 MB / 314.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0004267/0.09001, allocations: 235.6 kB / 350.8 MB, free: 8.309 MB / 314.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.006282/0.09629, allocations: 4.305 MB / 355.1 MB, free: 3.938 MB / 314.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0008058/0.09709, allocations: 151 kB / 355.2 MB, free: 3.789 MB / 314.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 5.672e-05/0.09715, allocations: 43.98 kB / 355.3 MB, free: 3.746 MB / 314.7 MB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 52
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (115):
 * Single equations (assignments): 114
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 1
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 0 systems
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(10,49)}
Notification: Performance of prepare postOptimizeDAE: time 0.0003044/0.09746, allocations: 196.3 kB / 355.5 MB, free: 3.543 MB / 314.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0001719/0.09763, allocations: 139.8 kB / 355.6 MB, free: 3.406 MB / 314.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.0001812/0.09781, allocations: 223.7 kB / 355.8 MB, free: 3.18 MB / 314.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 6.763e-06/0.09782, allocations: 11.98 kB / 355.8 MB, free: 3.168 MB / 314.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 3.967e-06/0.09782, allocations: 0 / 355.8 MB, free: 3.168 MB / 314.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 7.685e-06/0.09783, allocations: 7.984 kB / 355.8 MB, free: 3.16 MB / 314.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.0008351/0.09866, allocations: 0.6984 MB / 356.5 MB, free: 2.441 MB / 314.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 4.118e-06/0.09867, allocations: 0 / 356.5 MB, free: 2.441 MB / 314.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.000213/0.09888, allocations: 95.97 kB / 356.6 MB, free: 2.348 MB / 314.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 0.003511/0.1024, allocations: 1.13 MB / 357.8 MB, free: 1.211 MB / 314.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 4.741e-05/0.1024, allocations: 19.94 kB / 357.8 MB, free: 1.191 MB / 314.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.006126/0.1086, allocations: 4.183 MB / 362 MB, free: 12.91 MB / 330.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.041e-06/0.1086, allocations: 4 kB / 362 MB, free: 12.91 MB / 330.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.002936/0.1115, allocations: 1.463 MB / 363.4 MB, free: 11.42 MB / 330.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.0005065/0.112, allocations: 233 kB / 363.7 MB, free: 11.19 MB / 330.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.000101/0.1121, allocations: 20 kB / 363.7 MB, free: 11.17 MB / 330.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0003598/0.1125, allocations: 31.94 kB / 363.7 MB, free: 11.14 MB / 330.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0001844/0.1127, allocations: 89.2 kB / 363.8 MB, free: 11.05 MB / 330.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 3.061e-05/0.1127, allocations: 23.98 kB / 363.8 MB, free: 11.03 MB / 330.7 MB
Notification: Performance of sorting global known variables: time 0.0005553/0.1132, allocations: 0.7004 MB / 364.5 MB, free: 10.3 MB / 330.7 MB
Notification: Performance of sort global known variables: time 9e-08/0.1132, allocations: 0 / 364.5 MB, free: 10.3 MB / 330.7 MB
Notification: Performance of remove unused functions: time 0.001211/0.1144, allocations: 0.6596 MB / 365.2 MB, free: 9.641 MB / 330.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 2
 * Number of states: 1 (hemoglobinConservationLaw.state[1])
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (40):
 * Single equations (assignments): 39
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 1
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 0 systems
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(10,49)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.0002054/0.1147, allocations: 96.39 kB / 365.3 MB, free: 9.539 MB / 330.7 MB
Notification: Performance of simCode: created initialization part: time 0.001997/0.1167, allocations: 1.181 MB / 366.5 MB, free: 8.344 MB / 330.7 MB
Notification: Performance of simCode: created event and clocks part: time 3.048e-05/0.1167, allocations: 28.5 kB / 366.5 MB, free: 8.316 MB / 330.7 MB
Notification: Performance of simCode: created simulation system equations: time 0.001547/0.1182, allocations: 0.8499 MB / 367.3 MB, free: 7.449 MB / 330.7 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0009699/0.1192, allocations: 335 kB / 367.7 MB, free: 7.125 MB / 330.7 MB
Error: Error parsing unit kcal/min: Unit not found
Error: Error parsing unit kcal: Unit not found
Error: Error parsing unit %: Parse error
Error: Error parsing unit kcal/mol: Unit not found
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.004121/0.1233, allocations: 2.836 MB / 370.5 MB, free: 4.25 MB / 330.7 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0003433/0.1237, allocations: 391.5 kB / 370.9 MB, free: 3.844 MB / 330.7 MB
Notification: Performance of simCode: alias equations: time 0.0004124/0.1241, allocations: 151.2 kB / 371 MB, free: 3.691 MB / 330.7 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0004361/0.1245, allocations: 305.1 kB / 371.3 MB, free: 3.391 MB / 330.7 MB
Notification: Performance of SimCode: time 1.763e-06/0.1245, allocations: 3.938 kB / 371.3 MB, free: 3.387 MB / 330.7 MB
Notification: Performance of Templates: time 0.04529/0.1698, allocations: 40.24 MB / 411.6 MB, free: 11.5 MB / 378.7 MB
"
[Timeout remaining time 660]
make -j1 -f Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.makefile [Timeout 660]
(rm -f Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.pipe ; mkfifo Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.pipe ; head -c 1048576 < Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.pipe >> ../files/Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.sim & ./Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC -abortSlowSimulation -alarm=240  -lv LOG_STATS > Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.pipe 2>&1) [Timeout 240]
[Calling os._exit(0), Time elapsed: 3.9472516495734453]