Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Bodylight_Bodylight.Chemical.Examples.AcidBase.Phosphate.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001374/0.001374, allocations: 80.81 kB / 20.8 MB, free: 3.656 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001025/0.001025, allocations: 165 kB / 24.22 MB, free: 244 kB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.054/1.054, allocations: 177.1 MB / 204.7 MB, free: 4.992 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo): time 0.05774/0.05774, allocations: 12.76 MB / 273.9 MB, free: 15.95 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Bodylight with version 1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Bodylight.Chemical.Examples.AcidBase.Phosphate,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.AcidBase.Phosphate")
translateModel(Bodylight.Chemical.Examples.AcidBase.Phosphate,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.AcidBase.Phosphate") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.704e-06/1.704e-06, allocations: 0 / 294.9 MB, free: 11.75 MB / 266.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 1.542e-05/1.712e-05, allocations: 2.312 kB / 294.9 MB, free: 11.75 MB / 266.7 MB
Notification: Performance of NFInst.instantiate(Bodylight.Chemical.Examples.AcidBase.Phosphate): time 0.004553/0.00457, allocations: 4.646 MB / 299.5 MB, free: 8.625 MB / 266.7 MB
Notification: Performance of NFInst.instExpressions: time 0.005979/0.01055, allocations: 5.509 MB / 305 MB, free: 5.145 MB / 266.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.000271/0.01082, allocations: 36 kB / 305.1 MB, free: 5.121 MB / 266.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.0002432/0.01106, allocations: 125.3 kB / 305.2 MB, free: 5.043 MB / 266.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.Phosphate.H.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.Phosphate.H.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.AcidBase.Phosphate.H.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.Phosphate.H3PO4.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.Phosphate.H3PO4.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.AcidBase.Phosphate.H3PO4.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.Phosphate.H2PO4.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.Phosphate.H2PO4.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.AcidBase.Phosphate.H2PO4.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.Phosphate.HPO4.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.Phosphate.HPO4.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.AcidBase.Phosphate.HPO4.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.Phosphate.PO4.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.Phosphate.PO4.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.AcidBase.Phosphate.PO4.Utilities.UnitConversions.findUnit'.
Notification: Performance of NFTyping.typeBindings: time 0.001714/0.01278, allocations: 0.883 MB / 306.1 MB, free: 4.496 MB / 266.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.Phosphate.H.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.Phosphate.H.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.Phosphate.H3PO4.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.Phosphate.H3PO4.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.Phosphate.H2PO4.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.Phosphate.H2PO4.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.Phosphate.HPO4.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.Phosphate.HPO4.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.Phosphate.PO4.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.Phosphate.PO4.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
Notification: Performance of NFTyping.typeClassSections: time 0.001445/0.01422, allocations: 0.905 MB / 307 MB, free: 3.863 MB / 266.7 MB
Notification: Performance of NFFlatten.flatten: time 0.0007428/0.01496, allocations: 0.9281 MB / 307.9 MB, free: 3.301 MB / 266.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0002009/0.01517, allocations: 121.6 kB / 308 MB, free: 3.223 MB / 266.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.0004801/0.01565, allocations: 453.5 kB / 308.5 MB, free: 2.965 MB / 266.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.0004684/0.01611, allocations: 371 kB / 308.8 MB, free: 2.766 MB / 266.7 MB
Notification: Performance of NFPackage.collectConstants: time 8.207e-05/0.0162, allocations: 43.03 kB / 308.9 MB, free: 2.766 MB / 266.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.000165/0.01636, allocations: 55.06 kB / 308.9 MB, free: 2.762 MB / 266.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0001129/0.01647, allocations: 183.5 kB / 309.1 MB, free: 2.625 MB / 266.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.000143/0.01662, allocations: 228.8 kB / 309.3 MB, free: 2.422 MB / 266.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.0004318/0.01705, allocations: 0.607 MB / 310 MB, free: 1.812 MB / 266.7 MB
Notification: Performance of FrontEnd - DAE generated: time 2.144e-06/0.01705, allocations: 4 kB / 310 MB, free: 1.809 MB / 266.7 MB
Notification: Performance of FrontEnd: time 7.71e-07/0.01705, allocations: 0 / 310 MB, free: 1.809 MB / 266.7 MB
Notification: Performance of Transformations before backend: time 7.975e-06/0.01706, allocations: 0 / 310 MB, free: 1.809 MB / 266.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 94
 * Number of variables: 94
Notification: Performance of Generate backend data structure: time 0.0009387/0.018, allocations: 0.915 MB / 310.9 MB, free: 0.8672 MB / 266.7 MB
Notification: Performance of prepare preOptimizeDAE: time 3.38e-05/0.01803, allocations: 19.97 kB / 310.9 MB, free: 0.8477 MB / 266.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0002461/0.01828, allocations: 96.86 kB / 311 MB, free: 0.7539 MB / 266.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.000423/0.0187, allocations: 489.2 kB / 311.5 MB, free: 256 kB / 266.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 1.651e-05/0.01872, allocations: 33.38 kB / 311.5 MB, free: 224 kB / 266.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 3.922e-05/0.01876, allocations: 44.38 kB / 311.5 MB, free: 180 kB / 266.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.0003115/0.01907, allocations: 315 kB / 311.8 MB, free: 15.84 MB / 282.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 1.134e-05/0.01908, allocations: 11.88 kB / 311.9 MB, free: 15.83 MB / 282.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 2.186e-05/0.0191, allocations: 12 kB / 311.9 MB, free: 15.82 MB / 282.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 8.807e-06/0.01911, allocations: 12 kB / 311.9 MB, free: 15.81 MB / 282.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0001487/0.01926, allocations: 113.7 kB / 312 MB, free: 15.7 MB / 282.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.001367/0.02063, allocations: 1.059 MB / 313.1 MB, free: 14.59 MB / 282.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.0001923/0.02082, allocations: 192 kB / 313.2 MB, free: 14.38 MB / 282.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 7.373e-05/0.02089, allocations: 70.89 kB / 313.3 MB, free: 14.3 MB / 282.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 2.232e-05/0.02091, allocations: 8.234 kB / 313.3 MB, free: 14.29 MB / 282.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.131e-05/0.02094, allocations: 34.8 kB / 313.4 MB, free: 14.25 MB / 282.7 MB
Notification: Performance of pre-optimization done (n=29): time 1.573e-06/0.02094, allocations: 4 kB / 313.4 MB, free: 14.25 MB / 282.7 MB
Notification: Performance of matching and sorting (n=29): time 0.001291/0.02223, allocations: 0.5288 MB / 313.9 MB, free: 13.71 MB / 282.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 3.957e-05/0.02227, allocations: 110.8 kB / 314 MB, free: 13.58 MB / 282.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0003351/0.0226, allocations: 0.5272 MB / 314.5 MB, free: 13.04 MB / 282.7 MB
Notification: Performance of collectPreVariables (initialization): time 2.295e-05/0.02263, allocations: 33.7 kB / 314.6 MB, free: 13 MB / 282.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0001337/0.02276, allocations: 273.5 kB / 314.8 MB, free: 12.73 MB / 282.7 MB
Notification: Performance of collectInitialBindings (initialization): time 6.561e-05/0.02282, allocations: 119 kB / 314.9 MB, free: 12.61 MB / 282.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 9.329e-05/0.02292, allocations: 94.25 kB / 315 MB, free: 12.51 MB / 282.7 MB
Notification: Performance of setup shared object (initialization): time 0.0001156/0.02303, allocations: 382.6 kB / 315.4 MB, free: 12.13 MB / 282.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 6.687e-05/0.0231, allocations: 52.11 kB / 315.5 MB, free: 12.08 MB / 282.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.0001538/0.02325, allocations: 247.3 kB / 315.7 MB, free: 11.75 MB / 282.7 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.0002872/0.02354, allocations: 354.3 kB / 316 MB, free: 11.31 MB / 282.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 5.3e-06/0.02355, allocations: 4 kB / 316 MB, free: 11.3 MB / 282.7 MB
Notification: Performance of matching and sorting (n=63) (initialization): time 0.0008769/0.02442, allocations: 487.6 kB / 316.5 MB, free: 10.82 MB / 282.7 MB
Notification: Performance of prepare postOptimizeDAE: time 1.495e-05/0.02444, allocations: 8 kB / 316.5 MB, free: 10.81 MB / 282.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 8.015e-06/0.02445, allocations: 12.12 kB / 316.5 MB, free: 10.8 MB / 282.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 0.001193/0.02564, allocations: 338.4 kB / 316.9 MB, free: 10.46 MB / 282.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0002299/0.02587, allocations: 119.8 kB / 317 MB, free: 10.35 MB / 282.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.001932/0.0278, allocations: 1.757 MB / 318.7 MB, free: 8.512 MB / 282.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0001992/0.028, allocations: 67.56 kB / 318.8 MB, free: 8.445 MB / 282.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 1.898e-05/0.02802, allocations: 19.94 kB / 318.8 MB, free: 8.426 MB / 282.7 MB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 29
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (55):
 * Single equations (assignments): 54
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 1
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 0 systems
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(5,4)}
Notification: Performance of prepare postOptimizeDAE: time 0.0001135/0.02813, allocations: 148.5 kB / 319 MB, free: 8.27 MB / 282.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 7.12e-05/0.0282, allocations: 43.95 kB / 319 MB, free: 8.227 MB / 282.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.0007819/0.02899, allocations: 359.4 kB / 319.4 MB, free: 7.863 MB / 282.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 3.917e-06/0.02899, allocations: 4 kB / 319.4 MB, free: 7.859 MB / 282.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 2.054e-06/0.02899, allocations: 0 / 319.4 MB, free: 7.859 MB / 282.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 5.972e-06/0.029, allocations: 11.98 kB / 319.4 MB, free: 7.848 MB / 282.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.001358/0.03036, allocations: 0.8906 MB / 320.3 MB, free: 6.887 MB / 282.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 4.96e-06/0.03036, allocations: 4.344 kB / 320.3 MB, free: 6.883 MB / 282.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 8.904e-05/0.03045, allocations: 51.92 kB / 320.3 MB, free: 6.832 MB / 282.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 0.001098/0.03155, allocations: 327.3 kB / 320.6 MB, free: 6.508 MB / 282.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 1.585e-05/0.03157, allocations: 8 kB / 320.7 MB, free: 6.5 MB / 282.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.001581/0.03315, allocations: 1.693 MB / 322.3 MB, free: 4.707 MB / 282.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.625e-06/0.03315, allocations: 8 kB / 322.4 MB, free: 4.699 MB / 282.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.0008669/0.03402, allocations: 0.7226 MB / 323.1 MB, free: 3.922 MB / 282.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 9.533e-05/0.03411, allocations: 75.5 kB / 323.2 MB, free: 3.848 MB / 282.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 3.251e-05/0.03414, allocations: 11.98 kB / 323.2 MB, free: 3.836 MB / 282.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0001544/0.0343, allocations: 12 kB / 323.2 MB, free: 3.824 MB / 282.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 5.547e-05/0.03435, allocations: 39.81 kB / 323.2 MB, free: 3.785 MB / 282.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 1.096e-05/0.03436, allocations: 12 kB / 323.2 MB, free: 3.773 MB / 282.7 MB
Notification: Performance of sorting global known variables: time 0.0001697/0.03453, allocations: 252.6 kB / 323.5 MB, free: 3.531 MB / 282.7 MB
Notification: Performance of sort global known variables: time 2e-08/0.03453, allocations: 0 / 323.5 MB, free: 3.531 MB / 282.7 MB
Notification: Performance of remove unused functions: time 0.0004539/0.03499, allocations: 195.8 kB / 323.7 MB, free: 3.34 MB / 282.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 14
 * Number of states: 2 (electroneutrality.state[1],tP04.state[1])
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (23):
 * Single equations (assignments): 22
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 1
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 0 systems
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(5,4)}
Notification: Performance of Backend phase and start with SimCode phase: time 9.722e-05/0.03509, allocations: 84.42 kB / 323.7 MB, free: 3.25 MB / 282.7 MB
Notification: Performance of simCode: created initialization part: time 0.0006131/0.0357, allocations: 443.4 kB / 324.2 MB, free: 2.805 MB / 282.7 MB
Notification: Performance of simCode: created event and clocks part: time 9.407e-06/0.03571, allocations: 12.12 kB / 324.2 MB, free: 2.793 MB / 282.7 MB
Notification: Performance of simCode: created simulation system equations: time 0.0002842/0.03599, allocations: 270.9 kB / 324.5 MB, free: 2.512 MB / 282.7 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0004588/0.03645, allocations: 143 kB / 324.6 MB, free: 2.375 MB / 282.7 MB
Error: Error parsing unit kcal: Unit not found
Error: Error parsing unit kcal/min: Unit not found
Error: Error parsing unit meq: Unit not found
Error: Error parsing unit kcal/mol: Unit not found
Error: Error parsing unit %: Parse error
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.001703/0.03815, allocations: 1.1 MB / 325.7 MB, free: 1.207 MB / 282.7 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0001107/0.03826, allocations: 149.4 kB / 325.8 MB, free: 1.039 MB / 282.7 MB
Notification: Performance of simCode: alias equations: time 0.0001326/0.0384, allocations: 60.53 kB / 325.9 MB, free: 0.9805 MB / 282.7 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0001844/0.03858, allocations: 161.3 kB / 326.1 MB, free: 0.8242 MB / 282.7 MB
Notification: Performance of SimCode: time 7.62e-07/0.03858, allocations: 0 / 326.1 MB, free: 0.8242 MB / 282.7 MB
Notification: Performance of Templates: time 0.01446/0.05304, allocations: 12.99 MB / 339.1 MB, free: 4.008 MB / 298.7 MB
"
[Timeout remaining time 660]
make -j1 -f Bodylight_Bodylight.Chemical.Examples.AcidBase.Phosphate.makefile [Timeout 660]
(rm -f Bodylight_Bodylight.Chemical.Examples.AcidBase.Phosphate.pipe ; mkfifo Bodylight_Bodylight.Chemical.Examples.AcidBase.Phosphate.pipe ; head -c 1048576 < Bodylight_Bodylight.Chemical.Examples.AcidBase.Phosphate.pipe >> ../files/Bodylight_Bodylight.Chemical.Examples.AcidBase.Phosphate.sim & ./Bodylight_Bodylight.Chemical.Examples.AcidBase.Phosphate -abortSlowSimulation -alarm=240  -lv LOG_STATS > Bodylight_Bodylight.Chemical.Examples.AcidBase.Phosphate.pipe 2>&1) [Timeout 240]
[Calling os._exit(0), Time elapsed: 3.273959567770362]