Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001126/0.001126, allocations: 92.2 kB / 20.19 MB, free: 4.363 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001135/0.001135, allocations: 173 kB / 23.49 MB, free: 1.059 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9875/0.9875, allocations: 177.1 MB / 203.8 MB, free: 5.637 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.3/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.3/package.mo): time 0.05029/0.05029, allocations: 9.549 MB / 269.8 MB, free: 4.008 MB / 250.7 MB
"
[Timeout remaining time 180]
Using package BioChem with version 1.1.3 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.3/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2100,variableFilter="",fileNamePrefix="BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel")
translateModel(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2100,variableFilter="",fileNamePrefix="BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.733e-06/1.733e-06, allocations: 0 / 342 MB, free: 7.977 MB / 266.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 1.958e-05/2.131e-05, allocations: 2.312 kB / 342 MB, free: 7.973 MB / 266.7 MB
Notification: Performance of NFInst.instantiate(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel): time 0.009003/0.009025, allocations: 9.073 MB / 351.1 MB, free: 14.87 MB / 282.7 MB
Notification: Performance of NFInst.instExpressions: time 0.005805/0.01483, allocations: 3.433 MB / 354.5 MB, free: 11.42 MB / 282.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.0009275/0.01576, allocations: 112 kB / 354.6 MB, free: 11.31 MB / 282.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.0006039/0.01636, allocations: 381 kB / 355 MB, free: 10.93 MB / 282.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.0009999/0.01736, allocations: 0.5531 MB / 355.6 MB, free: 10.38 MB / 282.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.0007928/0.01815, allocations: 0.5852 MB / 356.1 MB, free: 9.789 MB / 282.7 MB
Notification: Performance of NFFlatten.flatten: time 0.001563/0.01972, allocations: 2.409 MB / 358.5 MB, free: 7.367 MB / 282.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.000876/0.02059, allocations: 0.8076 MB / 359.4 MB, free: 6.508 MB / 282.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.001056/0.02165, allocations: 1.548 MB / 360.9 MB, free: 4.957 MB / 282.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.000636/0.02228, allocations: 0.8101 MB / 361.7 MB, free: 4.145 MB / 282.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0002399/0.02252, allocations: 316 kB / 362 MB, free: 3.836 MB / 282.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.0002748/0.0228, allocations: 324 kB / 362.3 MB, free: 3.52 MB / 282.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.000303/0.0231, allocations: 0.5958 MB / 362.9 MB, free: 2.922 MB / 282.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.0005462/0.02365, allocations: 0.8693 MB / 363.8 MB, free: 2.051 MB / 282.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.001293/0.02494, allocations: 1.771 MB / 365.6 MB, free: 280 kB / 282.7 MB
Notification: Performance of FrontEnd - DAE generated: time 2.735e-06/0.02494, allocations: 0 / 365.6 MB, free: 280 kB / 282.7 MB
Notification: Performance of FrontEnd: time 1.583e-06/0.02495, allocations: 3.938 kB / 365.6 MB, free: 276 kB / 282.7 MB
Notification: Performance of Transformations before backend: time 1.391e-05/0.02496, allocations: 0 / 365.6 MB, free: 276 kB / 282.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 687
 * Number of variables: 687
Notification: Performance of Generate backend data structure: time 0.002245/0.0272, allocations: 2.395 MB / 368 MB, free: 13.82 MB / 298.7 MB
Notification: Performance of prepare preOptimizeDAE: time 3.566e-05/0.02724, allocations: 12.03 kB / 368 MB, free: 13.81 MB / 298.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0004794/0.02772, allocations: 471.4 kB / 368.4 MB, free: 13.35 MB / 298.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.000734/0.02845, allocations: 0.7274 MB / 369.2 MB, free: 12.59 MB / 298.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0001915/0.02864, allocations: 312.8 kB / 369.5 MB, free: 12.26 MB / 298.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0002232/0.02887, allocations: 280.3 kB / 369.8 MB, free: 11.99 MB / 298.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.002102/0.03097, allocations: 1.868 MB / 371.6 MB, free: 10.02 MB / 298.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 4.978e-05/0.03102, allocations: 11.94 kB / 371.6 MB, free: 10 MB / 298.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001226/0.03114, allocations: 104 kB / 371.7 MB, free: 9.902 MB / 298.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 3.953e-05/0.03118, allocations: 68 kB / 371.8 MB, free: 9.836 MB / 298.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.001443/0.03262, allocations: 0.9119 MB / 372.7 MB, free: 8.906 MB / 298.7 MB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.007123/0.03975, allocations: 7.749 MB / 380.5 MB, free: 0.8398 MB / 298.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.001165/0.04091, allocations: 1.015 MB / 381.5 MB, free: 15.77 MB / 314.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0004356/0.04135, allocations: 337.2 kB / 381.8 MB, free: 15.42 MB / 314.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 5.314e-05/0.0414, allocations: 29.25 kB / 381.8 MB, free: 15.39 MB / 314.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 3.098e-05/0.04143, allocations: 58.7 kB / 381.9 MB, free: 15.32 MB / 314.7 MB
Notification: Performance of pre-optimization done (n=139): time 2.946e-06/0.04144, allocations: 0 / 381.9 MB, free: 15.32 MB / 314.7 MB
Notification: Performance of matching and sorting (n=171): time 0.006596/0.04803, allocations: 5.387 MB / 387.3 MB, free: 9.938 MB / 314.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 7.272e-05/0.0481, allocations: 183.4 kB / 387.5 MB, free: 9.723 MB / 314.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0003777/0.04848, allocations: 0.5348 MB / 388 MB, free: 9.172 MB / 314.7 MB
Notification: Performance of collectPreVariables (initialization): time 6.374e-05/0.04855, allocations: 49.7 kB / 388 MB, free: 9.117 MB / 314.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.000415/0.04896, allocations: 1.029 MB / 389.1 MB, free: 8.074 MB / 314.7 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0003386/0.0493, allocations: 0.6468 MB / 389.7 MB, free: 7.422 MB / 314.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0003179/0.04962, allocations: 354.1 kB / 390.1 MB, free: 7.07 MB / 314.7 MB
Notification: Performance of setup shared object (initialization): time 0.000109/0.04973, allocations: 0.4926 MB / 390.6 MB, free: 6.57 MB / 314.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0005636/0.05029, allocations: 424.6 kB / 391 MB, free: 6.148 MB / 314.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.0008866/0.05118, allocations: 1.168 MB / 392.1 MB, free: 4.609 MB / 314.7 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.002142/0.05332, allocations: 2.051 MB / 394.2 MB, free: 2.199 MB / 314.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 8.867e-06/0.05333, allocations: 8 kB / 394.2 MB, free: 2.191 MB / 314.7 MB
Notification: Performance of matching and sorting (n=291) (initialization): time 0.001857/0.05518, allocations: 1.645 MB / 395.8 MB, free: 0.5391 MB / 314.7 MB
Notification: Performance of prepare postOptimizeDAE: time 2.76e-05/0.05521, allocations: 12 kB / 395.9 MB, free: 0.5273 MB / 314.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.768e-05/0.05523, allocations: 23.98 kB / 395.9 MB, free: 0.5039 MB / 314.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 3.49e-05/0.05526, allocations: 32 kB / 395.9 MB, free: 484 kB / 314.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.001373/0.05664, allocations: 0.6365 MB / 396.5 MB, free: 15.83 MB / 330.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 2.826e-05/0.05667, allocations: 51.8 kB / 396.6 MB, free: 15.78 MB / 330.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0003974/0.05706, allocations: 83.81 kB / 396.7 MB, free: 15.7 MB / 330.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 8.571e-05/0.05715, allocations: 88 kB / 396.8 MB, free: 15.62 MB / 330.7 MB
Warning: Assuming fixed start value for the following 41 variables:
         V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  \"Compartment volume\" type: Real
         adiposeTissue1.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  \"Compartment volume\" type: Real
         GlucoseRenalExcretion.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  \"Compartment volume\" type: Real
         GlucoseRenalExcretion.E.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         UtilizationMuscleTissue.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  \"Compartment volume\" type: Real
         UtilizationMuscleTissue.U_idm.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         GastroIntestinalTract.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  \"Compartment volume\" type: Real
         GastroIntestinalTract.GlucoseIntake.c:VARIABLE(min = 0.0 start = 78000.0 unit = \"mol/l\" fixed = true stateSelect=StateSelect.prefer )  \"Current concentration of substance (mM)\" type: Real
         TissueGlucose.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  \"Compartment volume\" type: Real
         PlasmaGlucose.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  \"Compartment volume\" type: Real
         PlasmaInsulin.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  \"Compartment volume\" type: Real
         LiverInsulin.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  \"Compartment volume\" type: Real
         EndogenousGlucoseProduction.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  \"Compartment volume\" type: Real
         EndogenousGlucoseProduction.I_po.c:VARIABLE(min = 0.0 start = 3.6 unit = \"mol/l\" fixed = true stateSelect=StateSelect.prefer )  \"Current concentration of substance (mM)\" type: Real
         BetaCell.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  \"Compartment volume\" type: Real
         BetaCell.Y.c:VARIABLE(min = -1e60 start = 0.0 unit = \"mol/l\" fixed = true stateSelect=StateSelect.prefer )  \"Current concentration of substance (mM)\" type: Real
         adiposeTissue1.adipocyte1.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  \"Compartment volume\" type: Real
         adiposeTissue1.adipocyte1.IR.c:VARIABLE(min = 0.0 start = 2.34e12 unit = \"mol/l\" fixed = true stateSelect=StateSelect.prefer )  \"Current concentration of substance (mM)\" type: Real
         adiposeTissue1.adipocyte1.IRS1.c:VARIABLE(min = 0.0 start = 1.61e10 unit = \"mol/l\" fixed = true stateSelect=StateSelect.prefer )  \"Current concentration of substance (mM)\" type: Real
         adiposeTissue1.adipocyte1.PKB.c:VARIABLE(min = 0.0 start = 1.68e7 unit = \"mol/l\" fixed = true stateSelect=StateSelect.prefer )  \"Current concentration of substance (mM)\" type: Real
         adiposeTissue1.adipocyte1.GLUT4_CYTOSOL.c:VARIABLE(min = 0.0 start = 5.8e8 unit = \"mol/l\" fixed = true stateSelect=StateSelect.prefer )  \"Current concentration of substance (mM)\" type: Real
         adiposeTissue1.adipocyte1.IR_insulin.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         adiposeTissue1.adipocyte1.GLUT4_MEMBRANE.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         adiposeTissue1.adipocyte1.GlucoseUtilization.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         adiposeTissue1.adipocyte1.PKB_P.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         adiposeTissue1.adipocyte1.IRS1_P.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         BetaCell.G_p.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         EndogenousGlucoseProduction.End.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         EndogenousGlucoseProduction.I_d.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         EndogenousGlucoseProduction.I_1.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         LiverInsulin.Deg.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         LiverInsulin.I_l.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         UtilizationMuscleTissue.UtilizationReaction.X:VARIABLE(fixed = true )  \"Insulin action on glucose utilization, signed deviation from basal\" type: Real
         PlasmaInsulin.Deg.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         PlasmaInsulin.I_p.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         PlasmaGlucose.U_ii.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         TissueGlucose.G_t.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         GastroIntestinalTract.End.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         GastroIntestinalTract.Q_sto1.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         GastroIntestinalTract.Q_gut.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         GastroIntestinalTract.Q_sto2.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 86
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (291):
 * Single equations (assignments): 291
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of prepare postOptimizeDAE: time 0.003927/0.06108, allocations: 452.9 kB / 397.2 MB, free: 15.19 MB / 330.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0002411/0.06132, allocations: 155.4 kB / 397.4 MB, free: 15.04 MB / 330.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.001434/0.06275, allocations: 1.057 MB / 398.4 MB, free: 13.97 MB / 330.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.202e-05/0.06276, allocations: 16 kB / 398.4 MB, free: 13.96 MB / 330.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 1.045e-05/0.06277, allocations: 7.938 kB / 398.4 MB, free: 13.95 MB / 330.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.424e-05/0.06279, allocations: 7.969 kB / 398.4 MB, free: 13.94 MB / 330.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.00376/0.06655, allocations: 2.591 MB / 401 MB, free: 11.29 MB / 330.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 5.48e-06/0.06655, allocations: 0 / 401 MB, free: 11.29 MB / 330.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.001384/0.06794, allocations: 475.4 kB / 401.5 MB, free: 10.83 MB / 330.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 2.009e-05/0.06796, allocations: 8 kB / 401.5 MB, free: 10.82 MB / 330.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0001196/0.06808, allocations: 59.97 kB / 401.6 MB, free: 10.76 MB / 330.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 1.254e-05/0.06809, allocations: 11.98 kB / 401.6 MB, free: 10.75 MB / 330.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 3.547e-06/0.06809, allocations: 0 / 401.6 MB, free: 10.75 MB / 330.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.002187/0.07028, allocations: 2.13 MB / 403.7 MB, free: 8.59 MB / 330.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.0001367/0.07042, allocations: 87.34 kB / 403.8 MB, free: 8.504 MB / 330.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001134/0.07053, allocations: 48 kB / 403.8 MB, free: 8.457 MB / 330.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0004727/0.071, allocations: 35.98 kB / 403.9 MB, free: 8.422 MB / 330.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0001599/0.07116, allocations: 117 kB / 404 MB, free: 8.305 MB / 330.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 5.663e-05/0.07122, allocations: 51.97 kB / 404 MB, free: 8.254 MB / 330.7 MB
Notification: Performance of sorting global known variables: time 0.0002316/0.07145, allocations: 298.8 kB / 404.3 MB, free: 7.961 MB / 330.7 MB
Notification: Performance of sort global known variables: time 5e-08/0.07145, allocations: 0 / 404.3 MB, free: 7.961 MB / 330.7 MB
Notification: Performance of remove unused functions: time 0.0009904/0.07244, allocations: 424 kB / 404.7 MB, free: 7.547 MB / 330.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 7
 * Number of states: 41 (GastroIntestinalTract.V,GastroIntestinalTract.Q_sto2.n,GastroIntestinalTract.Q_gut.n,GastroIntestinalTract.Q_sto1.n,GastroIntestinalTract.GlucoseIntake.c,GastroIntestinalTract.End.n,TissueGlucose.V,TissueGlucose.G_t.n,PlasmaGlucose.V,PlasmaGlucose.U_ii.n,PlasmaInsulin.V,PlasmaInsulin.I_p.n,PlasmaInsulin.Deg.n,UtilizationMuscleTissue.UtilizationReaction.X,LiverInsulin.V,LiverInsulin.I_l.n,LiverInsulin.Deg.n,EndogenousGlucoseProduction.V,EndogenousGlucoseProduction.I_1.n,EndogenousGlucoseProduction.I_d.n,EndogenousGlucoseProduction.End.n,EndogenousGlucoseProduction.I_po.c,BetaCell.V,BetaCell.G_p.n,BetaCell.Y.c,adiposeTissue1.adipocyte1.V,adiposeTissue1.adipocyte1.IR.c,adiposeTissue1.adipocyte1.IRS1.c,adiposeTissue1.adipocyte1.IRS1_P.n,adiposeTissue1.adipocyte1.PKB.c,adiposeTissue1.adipocyte1.PKB_P.n,adiposeTissue1.adipocyte1.GlucoseUtilization.n,adiposeTissue1.adipocyte1.GLUT4_MEMBRANE.n,adiposeTissue1.adipocyte1.GLUT4_CYTOSOL.c,adiposeTissue1.adipocyte1.IR_insulin.n,V,adiposeTissue1.V,UtilizationMuscleTissue.V,UtilizationMuscleTissue.U_idm.n,GlucoseRenalExcretion.V,GlucoseRenalExcretion.E.n)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (173):
 * Single equations (assignments): 173
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of Backend phase and start with SimCode phase: time 0.0001859/0.07263, allocations: 172.1 kB / 404.9 MB, free: 7.375 MB / 330.7 MB
Notification: Performance of simCode: created initialization part: time 0.00145/0.07408, allocations: 1.154 MB / 406.1 MB, free: 6.219 MB / 330.7 MB
Notification: Performance of simCode: created event and clocks part: time 2.264e-06/0.07408, allocations: 4 kB / 406.1 MB, free: 6.215 MB / 330.7 MB
Notification: Performance of simCode: created simulation system equations: time 0.0005881/0.07467, allocations: 0.5461 MB / 406.6 MB, free: 5.668 MB / 330.7 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0008318/0.0755, allocations: 242 kB / 406.9 MB, free: 5.441 MB / 330.7 MB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.004769/0.08027, allocations: 4.123 MB / 411 MB, free: 1.242 MB / 330.7 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.00025/0.08052, allocations: 333.8 kB / 411.3 MB, free: 0.8828 MB / 330.7 MB
Notification: Performance of simCode: alias equations: time 0.0005205/0.08104, allocations: 161.5 kB / 411.5 MB, free: 0.7227 MB / 330.7 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0002665/0.0813, allocations: 112.4 kB / 411.6 MB, free: 0.6094 MB / 330.7 MB
Notification: Performance of SimCode: time 1.823e-06/0.08131, allocations: 0 / 411.6 MB, free: 0.6094 MB / 330.7 MB
Notification: Performance of Templates: time 0.1264/0.2077, allocations: 15.75 MB / 427.3 MB, free: 69.98 MB / 330.7 MB
"
[Timeout remaining time 660]
make -j1 -f BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.makefile [Timeout 660]
(rm -f BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe ; mkfifo BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe ; head -c 1048576 < BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe >> ../files/BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.sim & ./BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel -abortSlowSimulation -alarm=240  -lv LOG_STATS > BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 3.5265110849868506]