Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001437/0.001437, allocations: 73.88 kB / 20.66 MB, free: 3.844 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001448/0.001448, allocations: 173 kB / 24.06 MB, free: 452 kB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9947/0.9947, allocations: 177.1 MB / 204.5 MB, free: 5.52 MB / 186.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo", uses=false) [Timeout 180] "[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Examples/package.order:0:0-0:0:readonly] Warning: The package.order file does not list all .mo files and directories (containing package.mo) present in its directory. Missing names are: Paracetamol_Experiment Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo): time 1.674/1.674, allocations: 273.5 MB / 0.522 GB, free: 14.77 MB / 458.7 MB " [Timeout remaining time 178] Using package Pharmacolibrary with version 25.09 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Pharmacolibrary.Examples.Paracetamol_Experiment,tolerance=1e-06,outputFormat="empty",numberOfIntervals=8640,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment") translateModel(Pharmacolibrary.Examples.Paracetamol_Experiment,tolerance=1e-06,outputFormat="empty",numberOfIntervals=8640,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment") [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 2.124e-06/2.124e-06, allocations: 3.938 kB / 0.6481 GB, free: 38.47 MB / 0.5262 GB Notification: Performance of FrontEnd - Absyn->SCode: time 2.352e-05/2.565e-05, allocations: 2.312 kB / 0.6481 GB, free: 38.46 MB / 0.5262 GB Notification: Performance of NFInst.instantiate(Pharmacolibrary.Examples.Paracetamol_Experiment): time 0.005021/0.005046, allocations: 6.888 MB / 0.6549 GB, free: 33.88 MB / 0.5262 GB Notification: Performance of NFInst.instExpressions: time 0.002015/0.007062, allocations: 1.293 MB / 0.6561 GB, free: 32.98 MB / 0.5262 GB Notification: Performance of NFInst.updateImplicitVariability: time 0.0003321/0.007394, allocations: 10.62 kB / 0.6561 GB, free: 32.97 MB / 0.5262 GB Notification: Performance of NFTyping.typeComponents: time 0.0002132/0.007607, allocations: 111.6 kB / 0.6563 GB, free: 32.91 MB / 0.5262 GB Notification: Performance of NFTyping.typeBindings: time 0.0005099/0.008117, allocations: 343.5 kB / 0.6566 GB, free: 32.66 MB / 0.5262 GB Notification: Performance of NFTyping.typeClassSections: time 0.0004958/0.008613, allocations: 280.2 kB / 0.6568 GB, free: 32.47 MB / 0.5262 GB Notification: Performance of NFFlatten.flatten: time 0.001041/0.009654, allocations: 1.222 MB / 0.658 GB, free: 31.78 MB / 0.5262 GB Notification: Performance of NFFlatten.resolveConnections: time 0.0003001/0.009954, allocations: 174.4 kB / 0.6582 GB, free: 31.67 MB / 0.5262 GB Notification: Performance of NFEvalConstants.evaluate: time 0.0006488/0.0106, allocations: 0.6266 MB / 0.6588 GB, free: 31.38 MB / 0.5262 GB Notification: Performance of NFSimplifyModel.simplify: time 0.0004553/0.01106, allocations: 360.3 kB / 0.6592 GB, free: 31.25 MB / 0.5262 GB Notification: Performance of NFPackage.collectConstants: time 0.0001318/0.01119, allocations: 110 kB / 0.6593 GB, free: 31.25 MB / 0.5262 GB Notification: Performance of NFFlatten.collectFunctions: time 0.0001433/0.01133, allocations: 110 kB / 0.6594 GB, free: 31.25 MB / 0.5262 GB Notification: Performance of NFScalarize.scalarize: time 9.762e-05/0.01143, allocations: 197.9 kB / 0.6596 GB, free: 31.11 MB / 0.5262 GB Notification: Performance of NFVerifyModel.verify: time 0.0002725/0.0117, allocations: 358.5 kB / 0.6599 GB, free: 30.94 MB / 0.5262 GB Notification: Performance of NFConvertDAE.convert: time 0.0005795/0.01228, allocations: 0.7125 MB / 0.6606 GB, free: 30.55 MB / 0.5262 GB Notification: Performance of FrontEnd - DAE generated: time 4.899e-06/0.01229, allocations: 4 kB / 0.6606 GB, free: 30.55 MB / 0.5262 GB Notification: Performance of FrontEnd: time 1.202e-06/0.01229, allocations: 5.125 kB / 0.6606 GB, free: 30.55 MB / 0.5262 GB Notification: Performance of Transformations before backend: time 1.56e-05/0.0123, allocations: 1.406 kB / 0.6606 GB, free: 30.55 MB / 0.5262 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 144 * Number of variables: 144 Notification: Performance of Generate backend data structure: time 0.00129/0.01359, allocations: 1.419 MB / 0.662 GB, free: 29.43 MB / 0.5262 GB Notification: Performance of prepare preOptimizeDAE: time 3.492e-05/0.01363, allocations: 11.19 kB / 0.662 GB, free: 29.43 MB / 0.5262 GB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0001726/0.0138, allocations: 137.7 kB / 0.6621 GB, free: 29.36 MB / 0.5262 GB Notification: Performance of preOpt evaluateParameters (simulation): time 0.0003968/0.0142, allocations: 439.1 kB / 0.6626 GB, free: 29.03 MB / 0.5262 GB Notification: Performance of preOpt simplifyIfEquations (simulation): time 3.045e-05/0.01423, allocations: 42.53 kB / 0.6626 GB, free: 29.01 MB / 0.5262 GB Notification: Performance of preOpt expandDerOperator (simulation): time 8.107e-05/0.01431, allocations: 77.42 kB / 0.6627 GB, free: 28.98 MB / 0.5262 GB Notification: Performance of preOpt clockPartitioning (simulation): time 0.0005648/0.01487, allocations: 0.6512 MB / 0.6633 GB, free: 28.57 MB / 0.5262 GB Notification: Performance of preOpt findStateOrder (simulation): time 2.594e-05/0.0149, allocations: 12.39 kB / 0.6633 GB, free: 28.57 MB / 0.5262 GB Notification: Performance of preOpt replaceEdgeChange (simulation): time 3.616e-05/0.01494, allocations: 23 kB / 0.6633 GB, free: 28.55 MB / 0.5262 GB Notification: Performance of preOpt inlineArrayEqn (simulation): time 1.352e-05/0.01495, allocations: 17.94 kB / 0.6634 GB, free: 28.55 MB / 0.5262 GB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0003709/0.01532, allocations: 437.6 kB / 0.6638 GB, free: 28.33 MB / 0.5262 GB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.001411/0.01673, allocations: 1.859 MB / 0.6656 GB, free: 26.93 MB / 0.5262 GB Notification: Performance of preOpt comSubExp (simulation): time 0.0005306/0.01726, allocations: 0.5413 MB / 0.6661 GB, free: 26.58 MB / 0.5262 GB Notification: Performance of preOpt resolveLoops (simulation): time 0.0001831/0.01745, allocations: 316 kB / 0.6664 GB, free: 26.34 MB / 0.5262 GB Notification: Performance of preOpt evalFunc (simulation): time 3.384e-05/0.01748, allocations: 14.16 kB / 0.6664 GB, free: 26.34 MB / 0.5262 GB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0005078/0.01799, allocations: 0.9456 MB / 0.6674 GB, free: 25.59 MB / 0.5262 GB Notification: Performance of pre-optimization done (n=99): time 3.196e-06/0.01799, allocations: 3.125 kB / 0.6674 GB, free: 25.59 MB / 0.5262 GB Notification: Performance of matching and sorting (n=105): time 0.00217/0.02016, allocations: 2.572 MB / 0.6699 GB, free: 23.8 MB / 0.5262 GB Notification: Performance of inlineWhenForInitialization (initialization): time 0.0001222/0.02028, allocations: 0.5965 MB / 0.6705 GB, free: 23.1 MB / 0.5262 GB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0002991/0.02058, allocations: 0.5057 MB / 0.6709 GB, free: 22.82 MB / 0.5262 GB Notification: Performance of collectPreVariables (initialization): time 5.751e-05/0.02064, allocations: 61.02 kB / 0.671 GB, free: 22.77 MB / 0.5262 GB Notification: Performance of collectInitialEqns (initialization): time 0.0001345/0.02077, allocations: 353.2 kB / 0.6713 GB, free: 22.48 MB / 0.5262 GB Notification: Performance of collectInitialBindings (initialization): time 0.0001651/0.02094, allocations: 360 kB / 0.6717 GB, free: 22.19 MB / 0.5262 GB Notification: Performance of simplifyInitialFunctions (initialization): time 0.000189/0.02113, allocations: 203.5 kB / 0.6719 GB, free: 22.09 MB / 0.5262 GB Notification: Performance of setup shared object (initialization): time 0.0001133/0.02124, allocations: 0.5719 MB / 0.6724 GB, free: 21.55 MB / 0.5262 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.0002659/0.02151, allocations: 420.3 kB / 0.6728 GB, free: 21.23 MB / 0.5262 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.0003447/0.02185, allocations: 0.836 MB / 0.6737 GB, free: 20.34 MB / 0.5262 GB Notification: Performance of analyzeInitialSystem (initialization): time 0.0009512/0.0228, allocations: 1.47 MB / 0.6751 GB, free: 18.96 MB / 0.5262 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 8.186e-06/0.02281, allocations: 1.625 kB / 0.6751 GB, free: 18.96 MB / 0.5262 GB Notification: Performance of matching and sorting (n=159) (initialization): time 0.0009375/0.02375, allocations: 1.303 MB / 0.6764 GB, free: 18.11 MB / 0.5262 GB Notification: Performance of prepare postOptimizeDAE: time 6.626e-05/0.02381, allocations: 266.6 kB / 0.6766 GB, free: 17.82 MB / 0.5262 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.21e-05/0.02383, allocations: 9.219 kB / 0.6766 GB, free: 17.82 MB / 0.5262 GB Notification: Performance of postOpt tearingSystem (initialization): time 1.991e-05/0.02385, allocations: 13.25 kB / 0.6766 GB, free: 17.82 MB / 0.5262 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0005039/0.02435, allocations: 260 kB / 0.6769 GB, free: 17.8 MB / 0.5262 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 1.39e-05/0.02436, allocations: 16.72 kB / 0.6769 GB, free: 17.79 MB / 0.5262 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0003732/0.02474, allocations: 58.36 kB / 0.677 GB, free: 17.77 MB / 0.5262 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 4.758e-05/0.02479, allocations: 37.56 kB / 0.677 GB, free: 17.77 MB / 0.5262 GB Warning: Assuming fixed start value for the following 30 variables: rapid_met.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real rapid_met.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real rapid_met.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real rapid_met.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real poor_met.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real poor_met.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real poor_met.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real poor_met.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real normal.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real normal.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real normal.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real normal.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real normal.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real poor_met.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real poor_met.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real poor_met.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real poor_met.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real rapid_met.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real rapid_met.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real rapid_met.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real rapid_met.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real rapid_met.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean rapid_met.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean poor_met.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean poor_met.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean normal.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean normal.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 36 * Number of states: 0 () * Number of discrete variables: 63 ($PRE.normal.central.Cmin,normal.central.Cmin,$PRE.normal.central.Cmax,normal.central.Cmax,$PRE.normal.periodicDose.absorptionLumen.Cmin,normal.periodicDose.absorptionLumen.Cmin,$PRE.normal.periodicDose.absorptionLumen.Cmax,normal.periodicDose.absorptionLumen.Cmax,$PRE.poor_met.central.Cmin,poor_met.central.Cmin,$PRE.poor_met.central.Cmax,poor_met.central.Cmax,$PRE.poor_met.periodicDose.absorptionLumen.Cmin,poor_met.periodicDose.absorptionLumen.Cmin,$PRE.poor_met.periodicDose.absorptionLumen.Cmax,poor_met.periodicDose.absorptionLumen.Cmax,$PRE.rapid_met.central.Cmin,rapid_met.central.Cmin,$PRE.rapid_met.central.Cmax,rapid_met.central.Cmax,$PRE.rapid_met.periodicDose.absorptionLumen.Cmin,rapid_met.periodicDose.absorptionLumen.Cmin,$PRE.rapid_met.periodicDose.absorptionLumen.Cmax,rapid_met.periodicDose.absorptionLumen.Cmax,$PRE.rapid_met.periodicDose.pulse.count,$PRE.rapid_met.periodicDose.pulse.T_start,$PRE.rapid_met.periodicDose.absorptionLumen.rising,$PRE.rapid_met.central.rising,rapid_met.periodicDose.pulse.count,rapid_met.periodicDose.pulse.T_start,rapid_met.periodicDose.absorptionLumen.rising,rapid_met.central.rising,$whenCondition5,$whenCondition4,$whenCondition3,$whenCondition2,$whenCondition1,$PRE.poor_met.periodicDose.pulse.count,$PRE.poor_met.periodicDose.pulse.T_start,$PRE.poor_met.periodicDose.absorptionLumen.rising,$PRE.poor_met.central.rising,poor_met.periodicDose.pulse.count,poor_met.periodicDose.pulse.T_start,poor_met.periodicDose.absorptionLumen.rising,poor_met.central.rising,$whenCondition10,$whenCondition9,$whenCondition8,$whenCondition7,$whenCondition6,$PRE.normal.periodicDose.pulse.count,$PRE.normal.periodicDose.pulse.T_start,$PRE.normal.periodicDose.absorptionLumen.rising,$PRE.normal.central.rising,normal.periodicDose.pulse.count,normal.periodicDose.pulse.T_start,normal.periodicDose.absorptionLumen.rising,normal.central.rising,$whenCondition15,$whenCondition14,$whenCondition13,$whenCondition12,$whenCondition11) * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (150): * Single equations (assignments): 141 * Array equations: 0 * Algorithm blocks: 9 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of prepare postOptimizeDAE: time 0.0004172/0.0252, allocations: 0.5542 MB / 0.6775 GB, free: 17.3 MB / 0.5262 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.000134/0.02534, allocations: 136.6 kB / 0.6777 GB, free: 17.24 MB / 0.5262 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 8.811e-05/0.02542, allocations: 83.55 kB / 0.6777 GB, free: 17.18 MB / 0.5262 GB Notification: Performance of postOpt inlineArrayEqn (simulation): time 9.467e-06/0.02543, allocations: 8.5 kB / 0.6778 GB, free: 17.18 MB / 0.5262 GB Notification: Performance of postOpt constantLinearSystem (simulation): time 1.554e-05/0.02545, allocations: 1.438 kB / 0.6778 GB, free: 17.18 MB / 0.5262 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 8.556e-06/0.02546, allocations: 4.672 kB / 0.6778 GB, free: 17.18 MB / 0.5262 GB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.001614/0.02707, allocations: 2.022 MB / 0.6797 GB, free: 15.86 MB / 0.5262 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 3.116e-06/0.02708, allocations: 0 / 0.6797 GB, free: 15.86 MB / 0.5262 GB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0004466/0.02752, allocations: 163.8 kB / 0.6799 GB, free: 15.84 MB / 0.5262 GB Notification: Performance of postOpt tearingSystem (simulation): time 6.442e-06/0.02753, allocations: 4.344 kB / 0.6799 GB, free: 15.84 MB / 0.5262 GB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 5.089e-05/0.02758, allocations: 36.94 kB / 0.6799 GB, free: 15.83 MB / 0.5262 GB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 4.758e-06/0.02758, allocations: 8.281 kB / 0.6799 GB, free: 15.82 MB / 0.5262 GB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.746e-06/0.02759, allocations: 3.938 kB / 0.6799 GB, free: 15.82 MB / 0.5262 GB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.001227/0.02881, allocations: 1.844 MB / 0.6817 GB, free: 14.59 MB / 0.5262 GB Notification: Performance of postOpt removeConstants (simulation): time 0.0002299/0.02904, allocations: 169 kB / 0.6819 GB, free: 14.49 MB / 0.5262 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001056/0.02915, allocations: 45.69 kB / 0.6819 GB, free: 14.46 MB / 0.5262 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.000275/0.02942, allocations: 47.7 kB / 0.682 GB, free: 14.45 MB / 0.5262 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0001573/0.02958, allocations: 98.66 kB / 0.6821 GB, free: 14.42 MB / 0.5262 GB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 4.065e-05/0.02962, allocations: 35.58 kB / 0.6821 GB, free: 14.41 MB / 0.5262 GB Notification: Performance of sorting global known variables: time 0.0002319/0.02985, allocations: 320.8 kB / 0.6824 GB, free: 14.25 MB / 0.5262 GB Notification: Performance of sort global known variables: time 1.7e-07/0.02985, allocations: 0 / 0.6824 GB, free: 14.25 MB / 0.5262 GB Notification: Performance of remove unused functions: time 0.0006994/0.03055, allocations: 246 kB / 0.6827 GB, free: 14.22 MB / 0.5262 GB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 3 * Number of states: 21 (rapid_met.central.C,rapid_met.central.AUC,rapid_met.elim.MExc,rapid_met.periodicDose.TotalCumulativeMass,rapid_met.periodicDose.absorptionLumen.C,rapid_met.periodicDose.absorptionLumen.AUC,rapid_met.periodicDose.variableDose.TotalCumulativeMass,poor_met.central.C,poor_met.central.AUC,poor_met.elim.MExc,poor_met.periodicDose.TotalCumulativeMass,poor_met.periodicDose.absorptionLumen.C,poor_met.periodicDose.absorptionLumen.AUC,poor_met.periodicDose.variableDose.TotalCumulativeMass,normal.central.C,normal.central.AUC,normal.elim.MExc,normal.periodicDose.TotalCumulativeMass,normal.periodicDose.absorptionLumen.C,normal.periodicDose.absorptionLumen.AUC,normal.periodicDose.variableDose.TotalCumulativeMass) * Number of discrete variables: 39 ($whenCondition1,$whenCondition2,$whenCondition3,$whenCondition4,$whenCondition5,rapid_met.central.Cmax,rapid_met.central.Cmin,rapid_met.central.rising,rapid_met.periodicDose.absorptionLumen.Cmax,rapid_met.periodicDose.absorptionLumen.Cmin,rapid_met.periodicDose.absorptionLumen.rising,rapid_met.periodicDose.pulse.T_start,rapid_met.periodicDose.pulse.count,$whenCondition6,$whenCondition7,$whenCondition8,$whenCondition9,$whenCondition10,poor_met.central.Cmax,poor_met.central.Cmin,poor_met.central.rising,poor_met.periodicDose.absorptionLumen.Cmax,poor_met.periodicDose.absorptionLumen.Cmin,poor_met.periodicDose.absorptionLumen.rising,poor_met.periodicDose.pulse.T_start,poor_met.periodicDose.pulse.count,$whenCondition11,$whenCondition12,$whenCondition13,$whenCondition14,$whenCondition15,normal.central.Cmax,normal.central.Cmin,normal.central.rising,normal.periodicDose.absorptionLumen.Cmax,normal.periodicDose.absorptionLumen.Cmin,normal.periodicDose.absorptionLumen.rising,normal.periodicDose.pulse.T_start,normal.periodicDose.pulse.count) * Number of discrete states: 33 (normal.periodicDose.pulse.count,normal.central.Cmin,$whenCondition15,normal.central.Cmax,$whenCondition14,normal.central.rising,normal.periodicDose.absorptionLumen.Cmin,$whenCondition13,normal.periodicDose.absorptionLumen.Cmax,$whenCondition12,normal.periodicDose.absorptionLumen.rising,poor_met.periodicDose.pulse.count,poor_met.central.Cmin,$whenCondition10,poor_met.central.Cmax,$whenCondition9,poor_met.central.rising,poor_met.periodicDose.absorptionLumen.Cmin,$whenCondition8,poor_met.periodicDose.absorptionLumen.Cmax,$whenCondition7,poor_met.periodicDose.absorptionLumen.rising,rapid_met.periodicDose.pulse.count,rapid_met.central.Cmin,$whenCondition5,rapid_met.central.Cmax,$whenCondition4,rapid_met.central.rising,rapid_met.periodicDose.absorptionLumen.Cmin,$whenCondition3,rapid_met.periodicDose.absorptionLumen.Cmax,$whenCondition2,rapid_met.periodicDose.absorptionLumen.rising) * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (87): * Single equations (assignments): 75 * Array equations: 0 * Algorithm blocks: 6 * Record equations: 0 * When equations: 6 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of Backend phase and start with SimCode phase: time 0.0002084/0.03076, allocations: 200 kB / 0.6829 GB, free: 14.09 MB / 0.5262 GB Notification: Performance of simCode: created initialization part: time 0.001046/0.03181, allocations: 1.431 MB / 0.6842 GB, free: 12.94 MB / 0.5262 GB Notification: Performance of simCode: created event and clocks part: time 3.566e-06/0.03181, allocations: 0 / 0.6842 GB, free: 12.94 MB / 0.5262 GB Notification: Performance of simCode: created simulation system equations: time 0.0004466/0.03226, allocations: 0.7924 MB / 0.685 GB, free: 12.29 MB / 0.5262 GB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0008736/0.03313, allocations: 283.1 kB / 0.6853 GB, free: 12.21 MB / 0.5262 GB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.002887/0.03602, allocations: 2.272 MB / 0.6875 GB, free: 10.73 MB / 0.5262 GB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0001457/0.03617, allocations: 173.9 kB / 0.6877 GB, free: 10.65 MB / 0.5262 GB Notification: Performance of simCode: alias equations: time 0.0003649/0.03653, allocations: 99.2 kB / 0.6878 GB, free: 10.63 MB / 0.5262 GB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0006362/0.03717, allocations: 373.6 kB / 0.6881 GB, free: 10.55 MB / 0.5262 GB Notification: Performance of SimCode: time 1.423e-06/0.03717, allocations: 0 / 0.6881 GB, free: 10.55 MB / 0.5262 GB Notification: Performance of Templates: time 0.01938/0.05654, allocations: 15.64 MB / 0.7034 GB, free: 15.5 MB / 0.5418 GB " [Timeout remaining time 660] make -j1 -f Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.makefile [Timeout 660] (rm -f Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.pipe ; mkfifo Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.pipe ; head -c 1048576 < Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.pipe >> ../files/Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.sim & ./Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment -abortSlowSimulation -alarm=240 -lv LOG_STATS > Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.pipe 2>&1) [Timeout 240] [Calling sys.exit(0), Time elapsed: 5.235060445964336]