Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0009275/0.0009275, allocations: 73.97 kB / 20.66 MB, free: 3.844 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001004/0.001004, allocations: 169.4 kB / 24.06 MB, free: 456 kB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.019/1.019, allocations: 177.1 MB / 204.5 MB, free: 5.504 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.08554/0.08554, allocations: 17.46 MB / 278.5 MB, free: 11.41 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57")
translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.383e-06/1.383e-06, allocations: 0 / 354.8 MB, free: 9.559 MB / 282.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 1.658e-05/1.796e-05, allocations: 2.312 kB / 354.8 MB, free: 9.555 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14335:7-14335:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14335:7-14335:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.Joels57): time 0.2682/0.2682, allocations: 78.53 MB / 433.3 MB, free: 12.96 MB / 330.8 MB
Notification: Performance of NFInst.instExpressions: time 0.05341/0.3216, allocations: 65.3 MB / 498.6 MB, free: 5.148 MB / 362.8 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.01119/0.3328, allocations: 230.1 kB / 498.8 MB, free: 4.922 MB / 362.8 MB
Notification: Performance of NFTyping.typeComponents: time 0.008935/0.3417, allocations: 2.733 MB / 0.4898 GB, free: 2.164 MB / 362.8 MB
Notification: Performance of NFTyping.typeBindings: time 0.02508/0.3668, allocations: 9.407 MB / 0.499 GB, free: 8.688 MB / 378.8 MB
Notification: Performance of NFTyping.typeClassSections: time 0.02814/0.395, allocations: 14.83 MB / 0.5135 GB, free: 9.805 MB / 394.8 MB
Notification: Performance of NFFlatten.flatten: time 0.4489/0.8438, allocations: 91.32 MB / 0.6027 GB, free: 12.72 MB / 442.9 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.05541/0.8993, allocations: 54.7 MB / 0.6561 GB, free: 11.58 MB / 458.9 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.1234/1.023, allocations: 75.04 MB / 0.7294 GB, free: 4.859 MB / 0.495 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.3508/1.373, allocations: 51.47 MB / 0.7796 GB, free: 49.48 MB / 0.5263 GB
Notification: Performance of NFPackage.collectConstants: time 0.03703/1.41, allocations: 12.21 MB / 0.7916 GB, free: 49.48 MB / 0.5263 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.0492/1.46, allocations: 17.33 MB / 0.8085 GB, free: 49.48 MB / 0.5263 GB
Notification: Performance of NFScalarize.scalarize: time 0.03933/1.499, allocations: 24.28 MB / 0.8322 GB, free: 49.48 MB / 0.5263 GB
Notification: Performance of NFVerifyModel.verify: time 0.06818/1.567, allocations: 31.12 MB / 0.8626 GB, free: 39.99 MB / 0.5263 GB
Notification: Performance of NFConvertDAE.convert: time 0.1257/1.693, allocations: 87 MB / 0.9476 GB, free: 14.98 MB / 0.5575 GB
Notification: Performance of FrontEnd - DAE generated: time 7.293e-06/1.693, allocations: 0 / 0.9476 GB, free: 14.98 MB / 0.5575 GB
Notification: Performance of FrontEnd: time 1.433e-06/1.693, allocations: 0 / 0.9476 GB, free: 14.98 MB / 0.5575 GB
Notification: Performance of Transformations before backend: time 0.003191/1.696, allocations: 2.688 kB / 0.9476 GB, free: 14.98 MB / 0.5575 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 11424
 * Number of variables: 11424
Notification: Performance of Generate backend data structure: time 0.5929/2.289, allocations: 63.33 MB / 1.009 GB, free: 118.1 MB / 0.5734 GB
Notification: Performance of prepare preOptimizeDAE: time 5.266e-05/2.289, allocations: 8.375 kB / 1.009 GB, free: 118.1 MB / 0.5734 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.08728/2.376, allocations: 19.73 MB / 1.029 GB, free: 114.5 MB / 0.5734 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.07637/2.453, allocations: 34.46 MB / 1.062 GB, free: 100.4 MB / 0.5734 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.00609/2.459, allocations: 9.207 MB / 1.071 GB, free: 92.06 MB / 0.5734 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.02787/2.487, allocations: 4.564 MB / 1.076 GB, free: 90.48 MB / 0.5734 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.165/2.652, allocations: 52.86 MB / 1.127 GB, free: 48.02 MB / 0.5734 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.001818/2.653, allocations: 30.56 kB / 1.127 GB, free: 48 MB / 0.5734 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0177/2.671, allocations: 1.758 MB / 1.129 GB, free: 46.25 MB / 0.5734 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0005729/2.672, allocations: 1.062 MB / 1.13 GB, free: 45.18 MB / 0.5734 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.1264/2.798, allocations: 50.22 MB / 1.179 GB, free: 11.02 MB / 0.589 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 1.101/3.899, allocations: 264.8 MB / 1.438 GB, free: 97.61 MB / 0.6203 GB
Notification: Performance of preOpt comSubExp (simulation): time 2.154/6.052, allocations: 0.9641 GB / 2.402 GB, free: 54.62 MB / 0.6671 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.04863/6.101, allocations: 19.85 MB / 2.421 GB, free: 36.66 MB / 0.6671 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.5256/6.627, allocations: 152.6 MB / 2.57 GB, free: 115.2 MB / 0.6671 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0001722/6.627, allocations: 339.7 kB / 2.571 GB, free: 114.9 MB / 0.6671 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.05385/6.681, allocations: 26.7 MB / 2.597 GB, free: 107.6 MB / 0.6671 GB
Notification: Performance of pre-optimization done (n=2949): time 0.0001572/6.681, allocations: 0 / 2.597 GB, free: 107.6 MB / 0.6671 GB
Notification: Performance of matching and sorting (n=3351): time 1.306/7.987, allocations: 190.1 MB / 2.782 GB, free: 152.7 MB / 0.6671 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0002054/7.988, allocations: 443.3 kB / 2.783 GB, free: 152.5 MB / 0.6671 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.04216/8.03, allocations: 25.27 MB / 2.807 GB, free: 147.5 MB / 0.6671 GB
Notification: Performance of collectPreVariables (initialization): time 0.0113/8.041, allocations: 0.5676 MB / 2.808 GB, free: 147.4 MB / 0.6671 GB
Notification: Performance of collectInitialEqns (initialization): time 0.01885/8.06, allocations: 23.38 MB / 2.831 GB, free: 139 MB / 0.6671 GB
Notification: Performance of collectInitialBindings (initialization): time 0.02275/8.083, allocations: 12.92 MB / 2.843 GB, free: 130.2 MB / 0.6671 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.04907/8.132, allocations: 10.42 MB / 2.854 GB, free: 121.1 MB / 0.6671 GB
Notification: Performance of setup shared object (initialization): time 7.236e-05/8.132, allocations: 480.7 kB / 2.854 GB, free: 120.6 MB / 0.6671 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.02832/8.16, allocations: 9.218 MB / 2.863 GB, free: 111.4 MB / 0.6671 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.03996/8.2, allocations: 29.93 MB / 2.892 GB, free: 74.41 MB / 0.6671 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.06406/8.264, allocations: 43.97 MB / 2.935 GB, free: 24.71 MB / 0.6671 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0005599/8.265, allocations: 124 kB / 2.935 GB, free: 24.59 MB / 0.6671 GB
Notification: Performance of matching and sorting (n=5583) (initialization): time 1.052/9.317, allocations: 122.3 MB / 3.055 GB, free: 114.8 MB / 0.6671 GB
Notification: Performance of prepare postOptimizeDAE: time 0.0004141/9.317, allocations: 192.2 kB / 3.055 GB, free: 114.6 MB / 0.6671 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0006888/9.318, allocations: 436 kB / 3.055 GB, free: 114.2 MB / 0.6671 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.645/9.963, allocations: 155.9 MB / 3.208 GB, free: 139.1 MB / 0.6671 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.03587/9.999, allocations: 10.54 MB / 3.218 GB, free: 139.1 MB / 0.6671 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.2295/10.23, allocations: 78.31 MB / 3.294 GB, free: 109.1 MB / 0.6671 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0448/10.27, allocations: 1.384 MB / 3.296 GB, free: 108.4 MB / 0.6671 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.01563/10.29, allocations: 2.393 MB / 3.298 GB, free: 107.4 MB / 0.6671 GB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 1983
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (5439):
 * Single equations (assignments): 5430
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.04607/10.33, allocations: 2.896 MB / 3.301 GB, free: 106.1 MB / 0.6671 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.03738/10.37, allocations: 4.174 MB / 3.305 GB, free: 105.6 MB / 0.6671 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.4296/10.8, allocations: 79.61 MB / 3.383 GB, free: 28.86 MB / 0.6671 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0004431/10.8, allocations: 356 kB / 3.383 GB, free: 28.51 MB / 0.6671 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0004379/10.8, allocations: 56 kB / 3.383 GB, free: 28.45 MB / 0.6671 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.001152/10.8, allocations: 179.3 kB / 3.383 GB, free: 28.28 MB / 0.6671 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.8727/11.68, allocations: 137.2 MB / 3.517 GB, free: 123.9 MB / 0.6828 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0004658/11.68, allocations: 13.94 kB / 3.517 GB, free: 123.9 MB / 0.6828 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.03036/11.71, allocations: 6.76 MB / 3.524 GB, free: 123.9 MB / 0.6828 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.1586/11.87, allocations: 51.71 MB / 3.574 GB, free: 97.23 MB / 0.6828 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.03531/11.9, allocations: 1.389 MB / 3.576 GB, free: 95.84 MB / 0.6828 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.155/12.06, allocations: 46.45 MB / 3.621 GB, free: 49.17 MB / 0.6828 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 6.863e-06/12.06, allocations: 15.84 kB / 3.621 GB, free: 49.16 MB / 0.6828 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.7543/12.81, allocations: 93.57 MB / 3.713 GB, free: 117.4 MB / 0.6828 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.02731/12.84, allocations: 8.726 MB / 3.721 GB, free: 117.4 MB / 0.6828 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.01533/12.85, allocations: 0.8908 MB / 3.722 GB, free: 117.4 MB / 0.6828 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.02714/12.88, allocations: 0.7544 MB / 3.723 GB, free: 117.4 MB / 0.6828 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.01609/12.9, allocations: 3.884 MB / 3.726 GB, free: 117.4 MB / 0.6828 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.009014/12.91, allocations: 1.114 MB / 3.728 GB, free: 117.4 MB / 0.6828 GB
Notification: Performance of sorting global known variables: time 0.0277/12.93, allocations: 13.57 MB / 3.741 GB, free: 116.4 MB / 0.6828 GB
Notification: Performance of sort global known variables: time 2.5e-07/12.93, allocations: 0 / 3.741 GB, free: 116.4 MB / 0.6828 GB
Notification: Performance of remove unused functions: time 0.06821/13, allocations: 15.4 MB / 3.756 GB, free: 116.4 MB / 0.6828 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 45
 * Number of states: 180 (pCO2_2000.solution.temperature,pCO2_2000.O2_free.logn,pCO2_2000.H2O.logn,pCO2_2000.relaxed.OxyHm[1].logn,pCO2_2000.relaxed.OxyHm[2].logn,pCO2_2000.relaxed.OxyHm[3].logn,pCO2_2000.relaxed.OxyHm[4].logn,pCO2_2000.relaxed.DeoxyHm[1].logn,pCO2_2000.relaxed.DeoxyHm[2].logn,pCO2_2000.relaxed.DeoxyHm[3].logn,pCO2_2000.relaxed.DeoxyHm[4].logn,pCO2_2000.relaxed.HmAH[1].logn,pCO2_2000.relaxed.HmAH[2].logn,pCO2_2000.relaxed.HmAH[3].logn,pCO2_2000.relaxed.HmAH[4].logn,pCO2_2000.relaxed.HmA[1].logn,pCO2_2000.relaxed.HmA[2].logn,pCO2_2000.relaxed.HmA[3].logn,pCO2_2000.relaxed.HmA[4].logn,pCO2_2000.relaxed.HmNH3[1].logn,pCO2_2000.relaxed.HmNH3[2].logn,pCO2_2000.relaxed.HmNH3[3].logn,pCO2_2000.relaxed.HmNH3[4].logn,pCO2_2000.relaxed.HmNH2[1].logn,pCO2_2000.relaxed.HmNH2[2].logn,pCO2_2000.relaxed.HmNH2[3].logn,pCO2_2000.relaxed.HmNH2[4].logn,pCO2_2000.relaxed.HmNHCOO[1].logn,pCO2_2000.relaxed.HmNHCOO[2].logn,pCO2_2000.relaxed.HmNHCOO[3].logn,pCO2_2000.relaxed.HmNHCOO[4].logn,pCO2_2000.tensed.OxyHm[1].logn,pCO2_2000.tensed.OxyHm[2].logn,pCO2_2000.tensed.OxyHm[3].logn,pCO2_2000.tensed.OxyHm[4].logn,pCO2_2000.tensed.DeoxyHm[1].logn,pCO2_2000.tensed.DeoxyHm[2].logn,pCO2_2000.tensed.DeoxyHm[3].logn,pCO2_2000.tensed.DeoxyHm[4].logn,pCO2_2000.tensed.HmAH[1].logn,pCO2_2000.tensed.HmAH[2].logn,pCO2_2000.tensed.HmAH[3].logn,pCO2_2000.tensed.HmAH[4].logn,pCO2_2000.tensed.HmA[1].logn,pCO2_2000.tensed.HmA[2].logn,pCO2_2000.tensed.HmA[3].logn,pCO2_2000.tensed.HmA[4].logn,pCO2_2000.tensed.HmNH3[1].logn,pCO2_2000.tensed.HmNH3[2].logn,pCO2_2000.tensed.HmNH3[3].logn,pCO2_2000.tensed.HmNH3[4].logn,pCO2_2000.tensed.HmNH2[1].logn,pCO2_2000.tensed.HmNH2[2].logn,pCO2_2000.tensed.HmNH2[3].logn,pCO2_2000.tensed.HmNH2[4].logn,pCO2_2000.tensed.HmNHCOO[1].logn,pCO2_2000.tensed.HmNHCOO[2].logn,pCO2_2000.tensed.HmNHCOO[3].logn,pCO2_2000.tensed.HmNHCOO[4].logn,pCO2_2000.CO2_free.logn,pCO2_5330.solution.temperature,pCO2_5330.O2_free.logn,pCO2_5330.H2O.logn,pCO2_5330.relaxed.OxyHm[1].logn,pCO2_5330.relaxed.OxyHm[2].logn,pCO2_5330.relaxed.OxyHm[3].logn,pCO2_5330.relaxed.OxyHm[4].logn,pCO2_5330.relaxed.DeoxyHm[1].logn,pCO2_5330.relaxed.DeoxyHm[2].logn,pCO2_5330.relaxed.DeoxyHm[3].logn,pCO2_5330.relaxed.DeoxyHm[4].logn,pCO2_5330.relaxed.HmAH[1].logn,pCO2_5330.relaxed.HmAH[2].logn,pCO2_5330.relaxed.HmAH[3].logn,pCO2_5330.relaxed.HmAH[4].logn,pCO2_5330.relaxed.HmA[1].logn,pCO2_5330.relaxed.HmA[2].logn,pCO2_5330.relaxed.HmA[3].logn,pCO2_5330.relaxed.HmA[4].logn,pCO2_5330.relaxed.HmNH3[1].logn,pCO2_5330.relaxed.HmNH3[2].logn,pCO2_5330.relaxed.HmNH3[3].logn,pCO2_5330.relaxed.HmNH3[4].logn,pCO2_5330.relaxed.HmNH2[1].logn,pCO2_5330.relaxed.HmNH2[2].logn,pCO2_5330.relaxed.HmNH2[3].logn,pCO2_5330.relaxed.HmNH2[4].logn,pCO2_5330.relaxed.HmNHCOO[1].logn,pCO2_5330.relaxed.HmNHCOO[2].logn,pCO2_5330.relaxed.HmNHCOO[3].logn,pCO2_5330.relaxed.HmNHCOO[4].logn,pCO2_5330.tensed.OxyHm[1].logn,pCO2_5330.tensed.OxyHm[2].logn,pCO2_5330.tensed.OxyHm[3].logn,pCO2_5330.tensed.OxyHm[4].logn,pCO2_5330.tensed.DeoxyHm[1].logn,pCO2_5330.tensed.DeoxyHm[2].logn,pCO2_5330.tensed.DeoxyHm[3].logn,pCO2_5330.tensed.DeoxyHm[4].logn,pCO2_5330.tensed.HmAH[1].logn,pCO2_5330.tensed.HmAH[2].logn,pCO2_5330.tensed.HmAH[3].logn,pCO2_5330.tensed.HmAH[4].logn,pCO2_5330.tensed.HmA[1].logn,pCO2_5330.tensed.HmA[2].logn,pCO2_5330.tensed.HmA[3].logn,pCO2_5330.tensed.HmA[4].logn,pCO2_5330.tensed.HmNH3[1].logn,pCO2_5330.tensed.HmNH3[2].logn,pCO2_5330.tensed.HmNH3[3].logn,pCO2_5330.tensed.HmNH3[4].logn,pCO2_5330.tensed.HmNH2[1].logn,pCO2_5330.tensed.HmNH2[2].logn,pCO2_5330.tensed.HmNH2[3].logn,pCO2_5330.tensed.HmNH2[4].logn,pCO2_5330.tensed.HmNHCOO[1].logn,pCO2_5330.tensed.HmNHCOO[2].logn,pCO2_5330.tensed.HmNHCOO[3].logn,pCO2_5330.tensed.HmNHCOO[4].logn,pCO2_5330.CO2_free.logn,pCO2_9330.solution.temperature,pCO2_9330.O2_free.logn,pCO2_9330.H2O.logn,pCO2_9330.relaxed.OxyHm[1].logn,pCO2_9330.relaxed.OxyHm[2].logn,pCO2_9330.relaxed.OxyHm[3].logn,pCO2_9330.relaxed.OxyHm[4].logn,pCO2_9330.relaxed.DeoxyHm[1].logn,pCO2_9330.relaxed.DeoxyHm[2].logn,pCO2_9330.relaxed.DeoxyHm[3].logn,pCO2_9330.relaxed.DeoxyHm[4].logn,pCO2_9330.relaxed.HmAH[1].logn,pCO2_9330.relaxed.HmAH[2].logn,pCO2_9330.relaxed.HmAH[3].logn,pCO2_9330.relaxed.HmAH[4].logn,pCO2_9330.relaxed.HmA[1].logn,pCO2_9330.relaxed.HmA[2].logn,pCO2_9330.relaxed.HmA[3].logn,pCO2_9330.relaxed.HmA[4].logn,pCO2_9330.relaxed.HmNH3[1].logn,pCO2_9330.relaxed.HmNH3[2].logn,pCO2_9330.relaxed.HmNH3[3].logn,pCO2_9330.relaxed.HmNH3[4].logn,pCO2_9330.relaxed.HmNH2[1].logn,pCO2_9330.relaxed.HmNH2[2].logn,pCO2_9330.relaxed.HmNH2[3].logn,pCO2_9330.relaxed.HmNH2[4].logn,pCO2_9330.relaxed.HmNHCOO[1].logn,pCO2_9330.relaxed.HmNHCOO[2].logn,pCO2_9330.relaxed.HmNHCOO[3].logn,pCO2_9330.relaxed.HmNHCOO[4].logn,pCO2_9330.tensed.OxyHm[1].logn,pCO2_9330.tensed.OxyHm[2].logn,pCO2_9330.tensed.OxyHm[3].logn,pCO2_9330.tensed.OxyHm[4].logn,pCO2_9330.tensed.DeoxyHm[1].logn,pCO2_9330.tensed.DeoxyHm[2].logn,pCO2_9330.tensed.DeoxyHm[3].logn,pCO2_9330.tensed.DeoxyHm[4].logn,pCO2_9330.tensed.HmAH[1].logn,pCO2_9330.tensed.HmAH[2].logn,pCO2_9330.tensed.HmAH[3].logn,pCO2_9330.tensed.HmAH[4].logn,pCO2_9330.tensed.HmA[1].logn,pCO2_9330.tensed.HmA[2].logn,pCO2_9330.tensed.HmA[3].logn,pCO2_9330.tensed.HmA[4].logn,pCO2_9330.tensed.HmNH3[1].logn,pCO2_9330.tensed.HmNH3[2].logn,pCO2_9330.tensed.HmNH3[3].logn,pCO2_9330.tensed.HmNH3[4].logn,pCO2_9330.tensed.HmNH2[1].logn,pCO2_9330.tensed.HmNH2[2].logn,pCO2_9330.tensed.HmNH2[3].logn,pCO2_9330.tensed.HmNH2[4].logn,pCO2_9330.tensed.HmNHCOO[1].logn,pCO2_9330.tensed.HmNHCOO[2].logn,pCO2_9330.tensed.HmNHCOO[3].logn,pCO2_9330.tensed.HmNHCOO[4].logn,pCO2_9330.CO2_free.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (3666):
 * Single equations (assignments): 3657
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.01416/13.02, allocations: 3.53 MB / 3.759 GB, free: 116.3 MB / 0.6828 GB
Notification: Performance of simCode: created initialization part: time 0.1047/13.12, allocations: 35.79 MB / 3.794 GB, free: 99.58 MB / 0.6828 GB
Notification: Performance of simCode: created event and clocks part: time 1.325e-05/13.12, allocations: 0 / 3.794 GB, free: 99.58 MB / 0.6828 GB
Notification: Performance of simCode: created simulation system equations: time 0.05205/13.17, allocations: 19.53 MB / 3.813 GB, free: 85.13 MB / 0.6828 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.04624/13.22, allocations: 8.183 MB / 3.821 GB, free: 80.85 MB / 0.6828 GB
Error: Error parsing unit kDa: Unit not found
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.1675/13.39, allocations: 90.23 MB / 3.909 GB, free: 15.44 MB / 0.6984 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.2677/13.65, allocations: 13.92 MB / 3.923 GB, free: 130.1 MB / 0.6984 GB
Notification: Performance of simCode: alias equations: time 0.02335/13.68, allocations: 5.142 MB / 3.928 GB, free: 129.5 MB / 0.6984 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.02314/13.7, allocations: 8.64 MB / 3.936 GB, free: 129.5 MB / 0.6984 GB
Notification: Performance of SimCode: time 2.064e-06/13.7, allocations: 0 / 3.936 GB, free: 129.5 MB / 0.6984 GB
Notification: Performance of Templates: time 2.33/16.03, allocations: 0.9921 GB / 4.929 GB, free: 141.3 MB / 0.714 GB
"
[Timeout remaining time 644]
make -j1 -f Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.makefile [Timeout 660]
(rm -f Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; mkfifo Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; head -c 1048576 < Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe >> ../files/Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.sim & ./Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57 -abortSlowSimulation -alarm=240  -lv LOG_STATS > Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 41.851978920865804]