Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Examples.debug.EnzymeKinetics2_.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0008879/0.0008879, allocations: 73.88 kB / 20.65 MB, free: 3.844 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.0009406/0.0009406, allocations: 169 kB / 24.06 MB, free: 452 kB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.057/1.057, allocations: 177.1 MB / 204.5 MB, free: 5.477 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.1039/0.1039, allocations: 17.46 MB / 278.5 MB, free: 11.37 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Examples.debug.EnzymeKinetics2_,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.debug.EnzymeKinetics2_")
translateModel(Chemical.Examples.debug.EnzymeKinetics2_,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.debug.EnzymeKinetics2_") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.352e-06/1.352e-06, allocations: 0 / 354.8 MB, free: 10.61 MB / 330.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 2.152e-05/2.287e-05, allocations: 2.312 kB / 354.8 MB, free: 10.61 MB / 330.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1343:7-1343:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1343:7-1343:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1361:7-1361:76:writable] Warning: An inner declaration for outer component dropOfCommons could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1361:7-1361:76:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"dropOfCommons\" component but
an inner \"dropOfCommons\" component is not defined.
Use Chemical.DropOfCommons in your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Examples.debug.EnzymeKinetics2_): time 0.03358/0.03361, allocations: 35.86 MB / 390.6 MB, free: 6.836 MB / 362.7 MB
Notification: Performance of NFInst.instExpressions: time 0.01349/0.04709, allocations: 10.88 MB / 401.5 MB, free: 11.91 MB / 378.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.002985/0.05008, allocations: 79.38 kB / 401.6 MB, free: 11.83 MB / 378.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.004323/0.0544, allocations: 1.989 MB / 403.6 MB, free: 9.832 MB / 378.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.004148/0.05855, allocations: 1.544 MB / 405.1 MB, free: 8.277 MB / 378.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.006049/0.0646, allocations: 4.271 MB / 409.4 MB, free: 3.988 MB / 378.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
Notification: Performance of NFFlatten.flatten: time 0.005093/0.06969, allocations: 3.646 MB / 413 MB, free: 336 kB / 378.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0009615/0.07065, allocations: 0.5467 MB / 413.6 MB, free: 15.74 MB / 394.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.003217/0.07387, allocations: 2.05 MB / 415.6 MB, free: 13.69 MB / 394.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.002168/0.07604, allocations: 1.621 MB / 417.3 MB, free: 12.06 MB / 394.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0006409/0.07668, allocations: 312 kB / 417.6 MB, free: 11.76 MB / 394.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.004098/0.08078, allocations: 2.062 MB / 419.6 MB, free: 9.691 MB / 394.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0008119/0.08159, allocations: 1.09 MB / 420.7 MB, free: 8.598 MB / 394.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.001693/0.08328, allocations: 1.145 MB / 421.9 MB, free: 7.449 MB / 394.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.007167/0.09045, allocations: 4.843 MB / 426.7 MB, free: 2.59 MB / 394.7 MB
Notification: Performance of FrontEnd - DAE generated: time 4.88e-06/0.09045, allocations: 0 / 426.7 MB, free: 2.59 MB / 394.7 MB
Notification: Performance of FrontEnd: time 9.22e-07/0.09046, allocations: 0 / 426.7 MB, free: 2.59 MB / 394.7 MB
Notification: Performance of Transformations before backend: time 0.0001531/0.09061, allocations: 0 / 426.7 MB, free: 2.59 MB / 394.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 960
 * Number of variables: 960
Notification: Performance of Generate backend data structure: time 0.007014/0.09762, allocations: 4.62 MB / 431.3 MB, free: 13.91 MB / 410.7 MB
Notification: Performance of prepare preOptimizeDAE: time 3.873e-05/0.09766, allocations: 12.03 kB / 431.3 MB, free: 13.89 MB / 410.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.002294/0.09996, allocations: 1.704 MB / 433 MB, free: 12.19 MB / 410.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.002271/0.1022, allocations: 1.95 MB / 435 MB, free: 10.19 MB / 410.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0007365/0.103, allocations: 0.4994 MB / 435.5 MB, free: 9.625 MB / 410.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0003164/0.1033, allocations: 292.3 kB / 435.8 MB, free: 9.34 MB / 410.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.004222/0.1075, allocations: 3.756 MB / 439.5 MB, free: 5.543 MB / 410.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 4.403e-05/0.1075, allocations: 4.188 kB / 439.5 MB, free: 5.539 MB / 410.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001653/0.1077, allocations: 120.1 kB / 439.7 MB, free: 5.422 MB / 410.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.000333/0.108, allocations: 466.8 kB / 440.1 MB, free: 4.965 MB / 410.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.004853/0.1129, allocations: 4.502 MB / 444.6 MB, free: 464 kB / 410.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.1869/0.2998, allocations: 14.83 MB / 459.4 MB, free: 91.88 MB / 410.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.001486/0.3013, allocations: 1.108 MB / 460.6 MB, free: 91.7 MB / 410.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0008165/0.3021, allocations: 0.7336 MB / 461.3 MB, free: 91.65 MB / 410.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.00972/0.3119, allocations: 9.655 MB / 470.9 MB, free: 86.67 MB / 410.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 4.794e-05/0.3119, allocations: 51.06 kB / 471 MB, free: 86.62 MB / 410.7 MB
Notification: Performance of pre-optimization done (n=188): time 4.508e-06/0.3119, allocations: 2.656 kB / 471 MB, free: 86.62 MB / 410.7 MB
Error: Internal error It is not possible to select continuous time states because Number of Equations 58 greater than number of States 57 to select from.
Error: Internal error Selection of DummyDerivatives failed due to negative system rank of -1!
           There are 31 unassigned equations and 30 potential states.
Error: Internal error - IndexReduction.selectDummyDerivatives2new failed!
Error: Internal error - IndexReduction.processComps4New failed!
Error: Internal error - IndexReduction.dynamicStateSelectionWork failed!
"
[Timeout remaining time 660]
[Calling sys.exit(0), Time elapsed: 2.191371815279126]