Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.000999/0.000999, allocations: 73.97 kB / 20.66 MB, free: 3.844 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001208/0.001208, allocations: 169.4 kB / 24.06 MB, free: 456 kB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9556/0.9556, allocations: 177.1 MB / 204.5 MB, free: 5.512 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo): time 0.1022/0.1022, allocations: 17.38 MB / 278.4 MB, free: 11.5 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57")
translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.512e-06/1.512e-06, allocations: 0 / 354.7 MB, free: 9.691 MB / 282.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 2.343e-05/2.495e-05, allocations: 6.312 kB / 354.7 MB, free: 9.684 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.Joels57): time 0.3466/0.3466, allocations: 78.52 MB / 433.2 MB, free: 12.99 MB / 330.8 MB
Notification: Performance of NFInst.instExpressions: time 0.06566/0.4123, allocations: 65.3 MB / 498.5 MB, free: 5.363 MB / 362.8 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.01337/0.4256, allocations: 234.1 kB / 498.7 MB, free: 5.133 MB / 362.8 MB
Notification: Performance of NFTyping.typeComponents: time 0.009284/0.4349, allocations: 2.725 MB / 0.4897 GB, free: 2.383 MB / 362.8 MB
Notification: Performance of NFTyping.typeBindings: time 0.02963/0.4645, allocations: 9.407 MB / 0.4989 GB, free: 8.906 MB / 378.8 MB
Notification: Performance of NFTyping.typeClassSections: time 0.03232/0.4969, allocations: 14.84 MB / 0.5134 GB, free: 10.01 MB / 394.8 MB
Notification: Performance of NFFlatten.flatten: time 0.4036/0.9004, allocations: 91.32 MB / 0.6026 GB, free: 12.53 MB / 442.9 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0717/0.9721, allocations: 54.63 MB / 0.6559 GB, free: 11.19 MB / 458.9 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.1252/1.097, allocations: 75.04 MB / 0.7292 GB, free: 4.762 MB / 0.495 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.3544/1.452, allocations: 51.47 MB / 0.7795 GB, free: 49.6 MB / 0.5263 GB
Notification: Performance of NFPackage.collectConstants: time 0.04342/1.495, allocations: 12.21 MB / 0.7914 GB, free: 49.6 MB / 0.5263 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.06245/1.558, allocations: 17.34 MB / 0.8083 GB, free: 49.6 MB / 0.5263 GB
Notification: Performance of NFScalarize.scalarize: time 0.04738/1.605, allocations: 24.28 MB / 0.832 GB, free: 49.6 MB / 0.5263 GB
Notification: Performance of NFVerifyModel.verify: time 0.07949/1.684, allocations: 31.12 MB / 0.8624 GB, free: 40.07 MB / 0.5263 GB
Notification: Performance of NFConvertDAE.convert: time 0.1399/1.824, allocations: 87 MB / 0.9474 GB, free: 14.99 MB / 0.5575 GB
Notification: Performance of FrontEnd - DAE generated: time 6.362e-06/1.824, allocations: 0 / 0.9474 GB, free: 14.99 MB / 0.5575 GB
Notification: Performance of FrontEnd: time 1.923e-06/1.824, allocations: 3.984 kB / 0.9474 GB, free: 14.99 MB / 0.5575 GB
Notification: Performance of Transformations before backend: time 0.003401/1.828, allocations: 0 / 0.9474 GB, free: 14.99 MB / 0.5575 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 11424
 * Number of variables: 11424
Notification: Performance of Generate backend data structure: time 0.5715/2.399, allocations: 63.33 MB / 1.009 GB, free: 118.1 MB / 0.5734 GB
Notification: Performance of prepare preOptimizeDAE: time 3.862e-05/2.399, allocations: 9.594 kB / 1.009 GB, free: 118.1 MB / 0.5734 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.07911/2.478, allocations: 19.72 MB / 1.028 GB, free: 114.6 MB / 0.5734 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.07689/2.555, allocations: 34.47 MB / 1.062 GB, free: 100.5 MB / 0.5734 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.00574/2.561, allocations: 9.205 MB / 1.071 GB, free: 92.13 MB / 0.5734 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.02449/2.586, allocations: 4.569 MB / 1.076 GB, free: 90.55 MB / 0.5734 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.1485/2.734, allocations: 52.86 MB / 1.127 GB, free: 48.03 MB / 0.5734 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.001799/2.736, allocations: 30.56 kB / 1.127 GB, free: 48.02 MB / 0.5734 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.01732/2.753, allocations: 1.758 MB / 1.129 GB, free: 46.26 MB / 0.5734 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0004575/2.754, allocations: 1.065 MB / 1.13 GB, free: 45.2 MB / 0.5734 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.127/2.881, allocations: 50.21 MB / 1.179 GB, free: 11.04 MB / 0.589 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 1.118/3.998, allocations: 264.8 MB / 1.438 GB, free: 97.52 MB / 0.6203 GB
Notification: Performance of preOpt comSubExp (simulation): time 2.218/6.216, allocations: 0.9641 GB / 2.402 GB, free: 54.21 MB / 0.6671 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.04519/6.261, allocations: 19.84 MB / 2.421 GB, free: 36.25 MB / 0.6671 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.5378/6.799, allocations: 152.6 MB / 2.57 GB, free: 114.9 MB / 0.6671 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0001968/6.799, allocations: 331.7 kB / 2.57 GB, free: 114.7 MB / 0.6671 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.05751/6.857, allocations: 26.7 MB / 2.597 GB, free: 107.4 MB / 0.6671 GB
Notification: Performance of pre-optimization done (n=2949): time 0.0001977/6.857, allocations: 0 / 2.597 GB, free: 107.4 MB / 0.6671 GB
Notification: Performance of matching and sorting (n=3351): time 1.338/8.195, allocations: 190.1 MB / 2.782 GB, free: 153.7 MB / 0.6671 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0002054/8.196, allocations: 449.4 kB / 2.783 GB, free: 153.5 MB / 0.6671 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.03618/8.232, allocations: 25.26 MB / 2.807 GB, free: 148.5 MB / 0.6671 GB
Notification: Performance of collectPreVariables (initialization): time 0.01938/8.251, allocations: 0.5695 MB / 2.808 GB, free: 148.4 MB / 0.6671 GB
Notification: Performance of collectInitialEqns (initialization): time 0.02822/8.279, allocations: 23.38 MB / 2.831 GB, free: 139.3 MB / 0.6671 GB
Notification: Performance of collectInitialBindings (initialization): time 0.02493/8.304, allocations: 12.92 MB / 2.843 GB, free: 130.3 MB / 0.6671 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.05819/8.363, allocations: 10.42 MB / 2.853 GB, free: 120.7 MB / 0.6671 GB
Notification: Performance of setup shared object (initialization): time 6.61e-05/8.363, allocations: 480.7 kB / 2.854 GB, free: 120.3 MB / 0.6671 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.02964/8.392, allocations: 9.221 MB / 2.863 GB, free: 111 MB / 0.6671 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.0393/8.432, allocations: 29.92 MB / 2.892 GB, free: 74.03 MB / 0.6671 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.06398/8.496, allocations: 43.96 MB / 2.935 GB, free: 24.33 MB / 0.6671 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0005322/8.496, allocations: 124 kB / 2.935 GB, free: 24.21 MB / 0.6671 GB
Notification: Performance of matching and sorting (n=5583) (initialization): time 0.9693/9.465, allocations: 122.3 MB / 3.055 GB, free: 114.9 MB / 0.6671 GB
Notification: Performance of prepare postOptimizeDAE: time 0.0003552/9.466, allocations: 192 kB / 3.055 GB, free: 114.8 MB / 0.6671 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.000739/9.466, allocations: 432 kB / 3.055 GB, free: 114.3 MB / 0.6671 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.5271/9.994, allocations: 155.9 MB / 3.207 GB, free: 139.5 MB / 0.6671 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.04001/10.03, allocations: 10.55 MB / 3.218 GB, free: 139.5 MB / 0.6671 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.2288/10.26, allocations: 78.3 MB / 3.294 GB, free: 109.4 MB / 0.6671 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.04527/10.31, allocations: 1.384 MB / 3.296 GB, free: 108.7 MB / 0.6671 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.01568/10.32, allocations: 2.394 MB / 3.298 GB, free: 107.8 MB / 0.6671 GB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 1983
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (5439):
 * Single equations (assignments): 5430
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.04229/10.37, allocations: 2.901 MB / 3.301 GB, free: 106.4 MB / 0.6671 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.02868/10.39, allocations: 4.168 MB / 3.305 GB, free: 105.8 MB / 0.6671 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.399/10.79, allocations: 79.62 MB / 3.383 GB, free: 28.24 MB / 0.6671 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0003619/10.79, allocations: 357.7 kB / 3.383 GB, free: 27.89 MB / 0.6671 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0004295/10.79, allocations: 56 kB / 3.383 GB, free: 27.84 MB / 0.6671 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.001079/10.8, allocations: 175.3 kB / 3.383 GB, free: 27.67 MB / 0.6671 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.8876/11.68, allocations: 137.3 MB / 3.517 GB, free: 123.5 MB / 0.6828 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0002876/11.68, allocations: 17.17 kB / 3.517 GB, free: 123.5 MB / 0.6828 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.02608/11.71, allocations: 6.761 MB / 3.524 GB, free: 123.5 MB / 0.6828 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.139/11.85, allocations: 51.7 MB / 3.574 GB, free: 96.86 MB / 0.6828 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.01077/11.86, allocations: 1.389 MB / 3.576 GB, free: 95.46 MB / 0.6828 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.1338/11.99, allocations: 46.45 MB / 3.621 GB, free: 48.8 MB / 0.6828 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 6.883e-06/11.99, allocations: 15.84 kB / 3.621 GB, free: 48.79 MB / 0.6828 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.7612/12.75, allocations: 93.57 MB / 3.712 GB, free: 117.6 MB / 0.6828 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.02904/12.78, allocations: 8.722 MB / 3.721 GB, free: 117.6 MB / 0.6828 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0168/12.8, allocations: 0.8948 MB / 3.722 GB, free: 117.6 MB / 0.6828 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.03228/12.83, allocations: 0.7503 MB / 3.723 GB, free: 117.6 MB / 0.6828 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.01638/12.85, allocations: 3.888 MB / 3.726 GB, free: 117.5 MB / 0.6828 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.01096/12.86, allocations: 1.117 MB / 3.727 GB, free: 117.5 MB / 0.6828 GB
Notification: Performance of sorting global known variables: time 0.02485/12.88, allocations: 13.57 MB / 3.741 GB, free: 116.6 MB / 0.6828 GB
Notification: Performance of sort global known variables: time 3.01e-07/12.88, allocations: 0 / 3.741 GB, free: 116.6 MB / 0.6828 GB
Notification: Performance of remove unused functions: time 0.07603/12.96, allocations: 15.4 MB / 3.756 GB, free: 116.6 MB / 0.6828 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 45
 * Number of states: 180 (pCO2_2000.solution.temperature,pCO2_2000.O2_free.logn,pCO2_2000.H2O.logn,pCO2_2000.relaxed.OxyHm[1].logn,pCO2_2000.relaxed.OxyHm[2].logn,pCO2_2000.relaxed.OxyHm[3].logn,pCO2_2000.relaxed.OxyHm[4].logn,pCO2_2000.relaxed.DeoxyHm[1].logn,pCO2_2000.relaxed.DeoxyHm[2].logn,pCO2_2000.relaxed.DeoxyHm[3].logn,pCO2_2000.relaxed.DeoxyHm[4].logn,pCO2_2000.relaxed.HmAH[1].logn,pCO2_2000.relaxed.HmAH[2].logn,pCO2_2000.relaxed.HmAH[3].logn,pCO2_2000.relaxed.HmAH[4].logn,pCO2_2000.relaxed.HmA[1].logn,pCO2_2000.relaxed.HmA[2].logn,pCO2_2000.relaxed.HmA[3].logn,pCO2_2000.relaxed.HmA[4].logn,pCO2_2000.relaxed.HmNH3[1].logn,pCO2_2000.relaxed.HmNH3[2].logn,pCO2_2000.relaxed.HmNH3[3].logn,pCO2_2000.relaxed.HmNH3[4].logn,pCO2_2000.relaxed.HmNH2[1].logn,pCO2_2000.relaxed.HmNH2[2].logn,pCO2_2000.relaxed.HmNH2[3].logn,pCO2_2000.relaxed.HmNH2[4].logn,pCO2_2000.relaxed.HmNHCOO[1].logn,pCO2_2000.relaxed.HmNHCOO[2].logn,pCO2_2000.relaxed.HmNHCOO[3].logn,pCO2_2000.relaxed.HmNHCOO[4].logn,pCO2_2000.tensed.OxyHm[1].logn,pCO2_2000.tensed.OxyHm[2].logn,pCO2_2000.tensed.OxyHm[3].logn,pCO2_2000.tensed.OxyHm[4].logn,pCO2_2000.tensed.DeoxyHm[1].logn,pCO2_2000.tensed.DeoxyHm[2].logn,pCO2_2000.tensed.DeoxyHm[3].logn,pCO2_2000.tensed.DeoxyHm[4].logn,pCO2_2000.tensed.HmAH[1].logn,pCO2_2000.tensed.HmAH[2].logn,pCO2_2000.tensed.HmAH[3].logn,pCO2_2000.tensed.HmAH[4].logn,pCO2_2000.tensed.HmA[1].logn,pCO2_2000.tensed.HmA[2].logn,pCO2_2000.tensed.HmA[3].logn,pCO2_2000.tensed.HmA[4].logn,pCO2_2000.tensed.HmNH3[1].logn,pCO2_2000.tensed.HmNH3[2].logn,pCO2_2000.tensed.HmNH3[3].logn,pCO2_2000.tensed.HmNH3[4].logn,pCO2_2000.tensed.HmNH2[1].logn,pCO2_2000.tensed.HmNH2[2].logn,pCO2_2000.tensed.HmNH2[3].logn,pCO2_2000.tensed.HmNH2[4].logn,pCO2_2000.tensed.HmNHCOO[1].logn,pCO2_2000.tensed.HmNHCOO[2].logn,pCO2_2000.tensed.HmNHCOO[3].logn,pCO2_2000.tensed.HmNHCOO[4].logn,pCO2_2000.CO2_free.logn,pCO2_5330.solution.temperature,pCO2_5330.O2_free.logn,pCO2_5330.H2O.logn,pCO2_5330.relaxed.OxyHm[1].logn,pCO2_5330.relaxed.OxyHm[2].logn,pCO2_5330.relaxed.OxyHm[3].logn,pCO2_5330.relaxed.OxyHm[4].logn,pCO2_5330.relaxed.DeoxyHm[1].logn,pCO2_5330.relaxed.DeoxyHm[2].logn,pCO2_5330.relaxed.DeoxyHm[3].logn,pCO2_5330.relaxed.DeoxyHm[4].logn,pCO2_5330.relaxed.HmAH[1].logn,pCO2_5330.relaxed.HmAH[2].logn,pCO2_5330.relaxed.HmAH[3].logn,pCO2_5330.relaxed.HmAH[4].logn,pCO2_5330.relaxed.HmA[1].logn,pCO2_5330.relaxed.HmA[2].logn,pCO2_5330.relaxed.HmA[3].logn,pCO2_5330.relaxed.HmA[4].logn,pCO2_5330.relaxed.HmNH3[1].logn,pCO2_5330.relaxed.HmNH3[2].logn,pCO2_5330.relaxed.HmNH3[3].logn,pCO2_5330.relaxed.HmNH3[4].logn,pCO2_5330.relaxed.HmNH2[1].logn,pCO2_5330.relaxed.HmNH2[2].logn,pCO2_5330.relaxed.HmNH2[3].logn,pCO2_5330.relaxed.HmNH2[4].logn,pCO2_5330.relaxed.HmNHCOO[1].logn,pCO2_5330.relaxed.HmNHCOO[2].logn,pCO2_5330.relaxed.HmNHCOO[3].logn,pCO2_5330.relaxed.HmNHCOO[4].logn,pCO2_5330.tensed.OxyHm[1].logn,pCO2_5330.tensed.OxyHm[2].logn,pCO2_5330.tensed.OxyHm[3].logn,pCO2_5330.tensed.OxyHm[4].logn,pCO2_5330.tensed.DeoxyHm[1].logn,pCO2_5330.tensed.DeoxyHm[2].logn,pCO2_5330.tensed.DeoxyHm[3].logn,pCO2_5330.tensed.DeoxyHm[4].logn,pCO2_5330.tensed.HmAH[1].logn,pCO2_5330.tensed.HmAH[2].logn,pCO2_5330.tensed.HmAH[3].logn,pCO2_5330.tensed.HmAH[4].logn,pCO2_5330.tensed.HmA[1].logn,pCO2_5330.tensed.HmA[2].logn,pCO2_5330.tensed.HmA[3].logn,pCO2_5330.tensed.HmA[4].logn,pCO2_5330.tensed.HmNH3[1].logn,pCO2_5330.tensed.HmNH3[2].logn,pCO2_5330.tensed.HmNH3[3].logn,pCO2_5330.tensed.HmNH3[4].logn,pCO2_5330.tensed.HmNH2[1].logn,pCO2_5330.tensed.HmNH2[2].logn,pCO2_5330.tensed.HmNH2[3].logn,pCO2_5330.tensed.HmNH2[4].logn,pCO2_5330.tensed.HmNHCOO[1].logn,pCO2_5330.tensed.HmNHCOO[2].logn,pCO2_5330.tensed.HmNHCOO[3].logn,pCO2_5330.tensed.HmNHCOO[4].logn,pCO2_5330.CO2_free.logn,pCO2_9330.solution.temperature,pCO2_9330.O2_free.logn,pCO2_9330.H2O.logn,pCO2_9330.relaxed.OxyHm[1].logn,pCO2_9330.relaxed.OxyHm[2].logn,pCO2_9330.relaxed.OxyHm[3].logn,pCO2_9330.relaxed.OxyHm[4].logn,pCO2_9330.relaxed.DeoxyHm[1].logn,pCO2_9330.relaxed.DeoxyHm[2].logn,pCO2_9330.relaxed.DeoxyHm[3].logn,pCO2_9330.relaxed.DeoxyHm[4].logn,pCO2_9330.relaxed.HmAH[1].logn,pCO2_9330.relaxed.HmAH[2].logn,pCO2_9330.relaxed.HmAH[3].logn,pCO2_9330.relaxed.HmAH[4].logn,pCO2_9330.relaxed.HmA[1].logn,pCO2_9330.relaxed.HmA[2].logn,pCO2_9330.relaxed.HmA[3].logn,pCO2_9330.relaxed.HmA[4].logn,pCO2_9330.relaxed.HmNH3[1].logn,pCO2_9330.relaxed.HmNH3[2].logn,pCO2_9330.relaxed.HmNH3[3].logn,pCO2_9330.relaxed.HmNH3[4].logn,pCO2_9330.relaxed.HmNH2[1].logn,pCO2_9330.relaxed.HmNH2[2].logn,pCO2_9330.relaxed.HmNH2[3].logn,pCO2_9330.relaxed.HmNH2[4].logn,pCO2_9330.relaxed.HmNHCOO[1].logn,pCO2_9330.relaxed.HmNHCOO[2].logn,pCO2_9330.relaxed.HmNHCOO[3].logn,pCO2_9330.relaxed.HmNHCOO[4].logn,pCO2_9330.tensed.OxyHm[1].logn,pCO2_9330.tensed.OxyHm[2].logn,pCO2_9330.tensed.OxyHm[3].logn,pCO2_9330.tensed.OxyHm[4].logn,pCO2_9330.tensed.DeoxyHm[1].logn,pCO2_9330.tensed.DeoxyHm[2].logn,pCO2_9330.tensed.DeoxyHm[3].logn,pCO2_9330.tensed.DeoxyHm[4].logn,pCO2_9330.tensed.HmAH[1].logn,pCO2_9330.tensed.HmAH[2].logn,pCO2_9330.tensed.HmAH[3].logn,pCO2_9330.tensed.HmAH[4].logn,pCO2_9330.tensed.HmA[1].logn,pCO2_9330.tensed.HmA[2].logn,pCO2_9330.tensed.HmA[3].logn,pCO2_9330.tensed.HmA[4].logn,pCO2_9330.tensed.HmNH3[1].logn,pCO2_9330.tensed.HmNH3[2].logn,pCO2_9330.tensed.HmNH3[3].logn,pCO2_9330.tensed.HmNH3[4].logn,pCO2_9330.tensed.HmNH2[1].logn,pCO2_9330.tensed.HmNH2[2].logn,pCO2_9330.tensed.HmNH2[3].logn,pCO2_9330.tensed.HmNH2[4].logn,pCO2_9330.tensed.HmNHCOO[1].logn,pCO2_9330.tensed.HmNHCOO[2].logn,pCO2_9330.tensed.HmNHCOO[3].logn,pCO2_9330.tensed.HmNHCOO[4].logn,pCO2_9330.CO2_free.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (3666):
 * Single equations (assignments): 3657
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.01708/12.98, allocations: 3.528 MB / 3.759 GB, free: 116.5 MB / 0.6828 GB
Notification: Performance of simCode: created initialization part: time 0.1211/13.1, allocations: 35.79 MB / 3.794 GB, free: 98.8 MB / 0.6828 GB
Notification: Performance of simCode: created event and clocks part: time 2.213e-05/13.1, allocations: 0 / 3.794 GB, free: 98.8 MB / 0.6828 GB
Notification: Performance of simCode: created simulation system equations: time 0.06689/13.17, allocations: 19.54 MB / 3.813 GB, free: 84.3 MB / 0.6828 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.05651/13.22, allocations: 8.178 MB / 3.821 GB, free: 79.96 MB / 0.6828 GB
Error: Error parsing unit kDa: Unit not found
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.2011/13.42, allocations: 90.23 MB / 3.909 GB, free: 14.9 MB / 0.6984 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.3238/13.75, allocations: 13.92 MB / 3.923 GB, free: 131.3 MB / 0.6984 GB
Notification: Performance of simCode: alias equations: time 0.03552/13.78, allocations: 5.144 MB / 3.928 GB, free: 130.8 MB / 0.6984 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.04521/13.83, allocations: 8.638 MB / 3.936 GB, free: 130.7 MB / 0.6984 GB
Notification: Performance of SimCode: time 1.563e-06/13.83, allocations: 3.625 kB / 3.936 GB, free: 130.7 MB / 0.6984 GB
Notification: Performance of Templates: time 2.272/16.1, allocations: 0.9921 GB / 4.928 GB, free: 141.6 MB / 0.714 GB
"
[Timeout remaining time 644]
make -j1 -f Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.makefile [Timeout 660]
(rm -f Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; mkfifo Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; head -c 1048576 < Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe >> ../files/Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.sim & ./Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57 -abortSlowSimulation -alarm=240  -lv LOG_STATS > Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 42.70521138701588]