Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001142/0.001142, allocations: 73.88 kB / 20.66 MB, free: 3.844 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001626/0.001626, allocations: 173 kB / 24.06 MB, free: 452 kB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9849/0.9849, allocations: 177.1 MB / 204.5 MB, free: 5.52 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo): time 0.08186/0.08186, allocations: 12.77 MB / 273.8 MB, free: 132 kB / 250.7 MB
"
[Timeout remaining time 180]
Using package Bodylight with version 1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Bodylight.Chemical.Examples.TwoConcentrationCompartments,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments")
translateModel(Bodylight.Chemical.Examples.TwoConcentrationCompartments,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.233e-06/1.233e-06, allocations: 0 / 347.9 MB, free: 0.9766 MB / 266.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 1.742e-05/1.866e-05, allocations: 4.844 kB / 347.9 MB, free: 0.9727 MB / 266.7 MB
Notification: Performance of NFInst.instantiate(Bodylight.Chemical.Examples.TwoConcentrationCompartments): time 0.003459/0.003478, allocations: 3.751 MB / 351.7 MB, free: 13.2 MB / 282.7 MB
Notification: Performance of NFInst.instExpressions: time 0.003746/0.007224, allocations: 3.007 MB / 354.7 MB, free: 10.18 MB / 282.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.0002227/0.007446, allocations: 15.81 kB / 354.7 MB, free: 10.17 MB / 282.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.000205/0.007651, allocations: 67.3 kB / 354.8 MB, free: 10.1 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance1.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance1.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance1.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Hydraulic.mo:1482:17-1484:29:writable] Warning: In relation resistor.Resistance == 0.0, == on Real operands is deprecated in non-function contexts.
Notification: Performance of NFTyping.typeBindings: time 0.001074/0.008725, allocations: 0.4931 MB / 355.3 MB, free: 9.605 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance1.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance1.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
Notification: Performance of NFTyping.typeClassSections: time 0.0008235/0.009549, allocations: 0.5238 MB / 355.8 MB, free: 9.082 MB / 282.7 MB
Notification: Performance of NFFlatten.flatten: time 0.003195/0.01274, allocations: 5.108 MB / 360.9 MB, free: 3.965 MB / 282.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0001494/0.01289, allocations: 78.55 kB / 361 MB, free: 3.883 MB / 282.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.001951/0.01484, allocations: 1.92 MB / 362.9 MB, free: 1.961 MB / 282.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.002004/0.01685, allocations: 1.67 MB / 364.6 MB, free: 296 kB / 282.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0007468/0.0176, allocations: 288 kB / 364.8 MB, free: 8 kB / 282.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.0003837/0.01798, allocations: 292 kB / 365.1 MB, free: 15.72 MB / 298.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0006168/0.0186, allocations: 0.9921 MB / 366.1 MB, free: 14.73 MB / 298.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.0007871/0.01938, allocations: 0.9319 MB / 367 MB, free: 13.79 MB / 298.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.00242/0.0218, allocations: 2.634 MB / 369.7 MB, free: 11.15 MB / 298.7 MB
Notification: Performance of FrontEnd - DAE generated: time 2.394e-06/0.02181, allocations: 0 / 369.7 MB, free: 11.15 MB / 298.7 MB
Notification: Performance of FrontEnd: time 1.202e-06/0.02181, allocations: 0 / 369.7 MB, free: 11.15 MB / 298.7 MB
Notification: Performance of Transformations before backend: time 3.92e-05/0.02185, allocations: 7.938 kB / 369.7 MB, free: 11.14 MB / 298.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 164
 * Number of variables: 164
Notification: Performance of Generate backend data structure: time 0.007661/0.02951, allocations: 3.625 MB / 373.3 MB, free: 7.473 MB / 298.7 MB
Notification: Performance of prepare preOptimizeDAE: time 3.623e-05/0.02954, allocations: 15.98 kB / 373.3 MB, free: 7.457 MB / 298.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0005484/0.03009, allocations: 268.2 kB / 373.6 MB, free: 7.195 MB / 298.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.001068/0.03116, allocations: 0.7899 MB / 374.4 MB, free: 6.371 MB / 298.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.001006/0.03217, allocations: 2.824 MB / 377.2 MB, free: 2.906 MB / 298.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0003695/0.03254, allocations: 152.1 kB / 377.4 MB, free: 2.758 MB / 298.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.001948/0.03448, allocations: 1.404 MB / 378.8 MB, free: 1.324 MB / 298.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 2.374e-05/0.03451, allocations: 8 kB / 378.8 MB, free: 1.316 MB / 298.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0002112/0.03472, allocations: 24 kB / 378.8 MB, free: 1.293 MB / 298.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 1.379e-05/0.03473, allocations: 16 kB / 378.8 MB, free: 1.277 MB / 298.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.001069/0.0358, allocations: 0.7024 MB / 379.5 MB, free: 0.5742 MB / 298.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.009984/0.04578, allocations: 5.402 MB / 384.9 MB, free: 11.11 MB / 314.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.001106/0.04689, allocations: 0.818 MB / 385.7 MB, free: 10.27 MB / 314.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0009801/0.04787, allocations: 0.7442 MB / 386.5 MB, free: 9.512 MB / 314.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.0002621/0.04813, allocations: 24.94 kB / 386.5 MB, free: 9.484 MB / 314.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.001454/0.04959, allocations: 1.294 MB / 387.8 MB, free: 8.156 MB / 314.7 MB
Notification: Performance of pre-optimization done (n=123): time 3.227e-06/0.04959, allocations: 3.938 kB / 387.8 MB, free: 8.152 MB / 314.7 MB
Notification: Performance of matching and sorting (n=123): time 0.003966/0.05356, allocations: 2.291 MB / 390.1 MB, free: 5.855 MB / 314.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 5.722e-05/0.05361, allocations: 94.05 kB / 390.2 MB, free: 5.742 MB / 314.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0004168/0.05403, allocations: 0.6124 MB / 390.8 MB, free: 5.113 MB / 314.7 MB
Notification: Performance of collectPreVariables (initialization): time 0.0002313/0.05426, allocations: 73.7 kB / 390.9 MB, free: 5.035 MB / 314.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0002263/0.05449, allocations: 405.2 kB / 391.3 MB, free: 4.633 MB / 314.7 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0004747/0.05496, allocations: 0.5812 MB / 391.8 MB, free: 4.047 MB / 314.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0007192/0.05568, allocations: 369 kB / 392.2 MB, free: 3.676 MB / 314.7 MB
Notification: Performance of setup shared object (initialization): time 0.0001464/0.05583, allocations: 0.5432 MB / 392.7 MB, free: 3.125 MB / 314.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.001016/0.05684, allocations: 0.681 MB / 393.4 MB, free: 2.438 MB / 314.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.001106/0.05795, allocations: 0.8801 MB / 394.3 MB, free: 1.535 MB / 314.7 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.003086/0.06104, allocations: 2.225 MB / 396.5 MB, free: 15.28 MB / 330.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 5.06e-06/0.06104, allocations: 0 / 396.5 MB, free: 15.28 MB / 330.7 MB
Notification: Performance of matching and sorting (n=237) (initialization): time 0.003083/0.06412, allocations: 1.992 MB / 398.5 MB, free: 13.27 MB / 330.7 MB
Notification: Performance of prepare postOptimizeDAE: time 3.473e-05/0.06416, allocations: 37.7 kB / 398.6 MB, free: 13.22 MB / 330.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 9.478e-06/0.06417, allocations: 64 / 398.6 MB, free: 13.22 MB / 330.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 2.104e-05/0.06419, allocations: 19.98 kB / 398.6 MB, free: 13.2 MB / 330.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0365/0.1007, allocations: 4.118 MB / 402.7 MB, free: 9.082 MB / 330.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 5.097e-05/0.1007, allocations: 8 kB / 402.7 MB, free: 9.074 MB / 330.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.002686/0.1034, allocations: 258.8 kB / 403 MB, free: 8.82 MB / 330.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0003089/0.1037, allocations: 36 kB / 403 MB, free: 8.785 MB / 330.7 MB
Warning: Assuming fixed start value for the following 1 variables:
         inertia.q_in.q:VARIABLE(flow=true start = advectionStream.SolutionFlow unit = \"m3/s\" fixed = true nominal = 1.6666666666666667e-8 )  \"Volume flow\" type: Real
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 6
 * Number of states: 0 ()
 * Number of discrete variables: 5 (pulse.count,$PRE.pulse.count,pulse.T_start,$PRE.pulse.T_start,$whenCondition1)
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (236):
 * Single equations (assignments): 235
 * Array equations: 0
 * Algorithm blocks: 1
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of prepare postOptimizeDAE: time 0.0007924/0.1045, allocations: 248.2 kB / 403.2 MB, free: 8.531 MB / 330.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0004996/0.105, allocations: 143.3 kB / 403.4 MB, free: 8.391 MB / 330.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.002964/0.108, allocations: 1.977 MB / 405.3 MB, free: 6.402 MB / 330.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.031e-05/0.108, allocations: 12 kB / 405.4 MB, free: 6.391 MB / 330.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 3.626e-06/0.108, allocations: 0 / 405.4 MB, free: 6.391 MB / 330.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.039e-05/0.108, allocations: 3.984 kB / 405.4 MB, free: 6.387 MB / 330.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.002549/0.1106, allocations: 1.979 MB / 407.3 MB, free: 4.363 MB / 330.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 6.522e-06/0.1106, allocations: 0 / 407.3 MB, free: 4.363 MB / 330.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.03857/0.1491, allocations: 4.067 MB / 411.4 MB, free: 300 kB / 330.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 2.298e-05/0.1492, allocations: 8 kB / 411.4 MB, free: 292 kB / 330.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0009111/0.1501, allocations: 80.05 kB / 411.5 MB, free: 212 kB / 330.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 6.773e-06/0.1501, allocations: 4 kB / 411.5 MB, free: 208 kB / 330.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 3.356e-06/0.1501, allocations: 4 kB / 411.5 MB, free: 204 kB / 330.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.1319/0.282, allocations: 2.565 MB / 414.1 MB, free: 66.07 MB / 330.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.0006859/0.2827, allocations: 394.4 kB / 414.5 MB, free: 66.05 MB / 330.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0003766/0.2831, allocations: 73.67 kB / 414.5 MB, free: 66.05 MB / 330.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.001746/0.2848, allocations: 139 kB / 414.7 MB, free: 66.05 MB / 330.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0004041/0.2852, allocations: 136.5 kB / 414.8 MB, free: 66.05 MB / 330.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.0001613/0.2854, allocations: 30.38 kB / 414.8 MB, free: 66.05 MB / 330.7 MB
Notification: Performance of sorting global known variables: time 0.0002602/0.2856, allocations: 356.2 kB / 415.2 MB, free: 65.91 MB / 330.7 MB
Notification: Performance of sort global known variables: time 7.1e-08/0.2856, allocations: 1.094 kB / 415.2 MB, free: 65.91 MB / 330.7 MB
Notification: Performance of remove unused functions: time 0.001314/0.2869, allocations: 0.6109 MB / 415.8 MB, free: 65.9 MB / 330.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 2
 * Number of states: 103 (substance.state,substance1.state,advectionStream.c[2],advectionStream.c[3],advectionStream.c[4],advectionStream.c[5],advectionStream.c[6],advectionStream.c[7],advectionStream.c[8],advectionStream.c[9],advectionStream.c[10],advectionStream.c[11],advectionStream.c[12],advectionStream.c[13],advectionStream.c[14],advectionStream.c[15],advectionStream.c[16],advectionStream.c[17],advectionStream.c[18],advectionStream.c[19],advectionStream.c[20],advectionStream.c[21],advectionStream.c[22],advectionStream.c[23],advectionStream.c[24],advectionStream.c[25],advectionStream.c[26],advectionStream.c[27],advectionStream.c[28],advectionStream.c[29],advectionStream.c[30],advectionStream.c[31],advectionStream.c[32],advectionStream.c[33],advectionStream.c[34],advectionStream.c[35],advectionStream.c[36],advectionStream.c[37],advectionStream.c[38],advectionStream.c[39],advectionStream.c[40],advectionStream.c[41],advectionStream.c[42],advectionStream.c[43],advectionStream.c[44],advectionStream.c[45],advectionStream.c[46],advectionStream.c[47],advectionStream.c[48],advectionStream.c[49],advectionStream.c[50],advectionStream.c[51],advectionStream.c[52],advectionStream.c[53],advectionStream.c[54],advectionStream.c[55],advectionStream.c[56],advectionStream.c[57],advectionStream.c[58],advectionStream.c[59],advectionStream.c[60],advectionStream.c[61],advectionStream.c[62],advectionStream.c[63],advectionStream.c[64],advectionStream.c[65],advectionStream.c[66],advectionStream.c[67],advectionStream.c[68],advectionStream.c[69],advectionStream.c[70],advectionStream.c[71],advectionStream.c[72],advectionStream.c[73],advectionStream.c[74],advectionStream.c[75],advectionStream.c[76],advectionStream.c[77],advectionStream.c[78],advectionStream.c[79],advectionStream.c[80],advectionStream.c[81],advectionStream.c[82],advectionStream.c[83],advectionStream.c[84],advectionStream.c[85],advectionStream.c[86],advectionStream.c[87],advectionStream.c[88],advectionStream.c[89],advectionStream.c[90],advectionStream.c[91],advectionStream.c[92],advectionStream.c[93],advectionStream.c[94],advectionStream.c[95],advectionStream.c[96],advectionStream.c[97],advectionStream.c[98],advectionStream.c[99],elasticVessel.volume,elasticVessel1.volume,inertia.q_in.q)
 * Number of discrete variables: 3 ($whenCondition1,pulse.T_start,pulse.count)
 * Number of discrete states: 1 (pulse.count)
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (123):
 * Single equations (assignments): 121
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 2
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of Backend phase and start with SimCode phase: time 0.00032/0.2873, allocations: 201.5 kB / 416 MB, free: 65.8 MB / 330.7 MB
Notification: Performance of simCode: created initialization part: time 0.002902/0.2902, allocations: 1.743 MB / 417.7 MB, free: 65.67 MB / 330.7 MB
Notification: Performance of simCode: created event and clocks part: time 3.867e-06/0.2902, allocations: 3.406 kB / 417.7 MB, free: 65.67 MB / 330.7 MB
Notification: Performance of simCode: created simulation system equations: time 0.00114/0.2913, allocations: 0.8559 MB / 418.6 MB, free: 65.65 MB / 330.7 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.00115/0.2925, allocations: 0.5671 MB / 419.2 MB, free: 65.61 MB / 330.7 MB
Error: Error parsing unit kcal: Unit not found
Error: Error parsing unit kcal/mol: Unit not found
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.005735/0.2982, allocations: 6.274 MB / 425.4 MB, free: 63.14 MB / 330.7 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0001416/0.2983, allocations: 268.6 kB / 425.7 MB, free: 63.06 MB / 330.7 MB
Notification: Performance of simCode: alias equations: time 0.001695/0.3, allocations: 335.7 kB / 426 MB, free: 62.84 MB / 330.7 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.001862/0.3019, allocations: 0.573 MB / 426.6 MB, free: 62.77 MB / 330.7 MB
Notification: Performance of SimCode: time 9.22e-07/0.3019, allocations: 0 / 426.6 MB, free: 62.77 MB / 330.7 MB
Notification: Performance of Templates: time 0.03571/0.3376, allocations: 47.37 MB / 474 MB, free: 18.49 MB / 330.7 MB
"
[Timeout remaining time 660]
make -j1 -f Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.makefile [Timeout 660]
(rm -f Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.pipe ; mkfifo Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.pipe ; head -c 1048576 < Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.pipe >> ../files/Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.sim & ./Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments -abortSlowSimulation -alarm=240  -lv LOG_STATS > Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 4.256592354737222]