Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Bodylight_Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.002095/0.002095, allocations: 73.97 kB / 20.66 MB, free: 3.844 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.002777/0.002777, allocations: 173.4 kB / 24.06 MB, free: 452 kB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9641/0.9641, allocations: 177.1 MB / 204.5 MB, free: 5.523 MB / 186.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo): time 0.06175/0.06175, allocations: 12.76 MB / 273.8 MB, free: 140 kB / 250.7 MB " [Timeout remaining time 180] Using package Bodylight with version 1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Bodylight.Chemical.Examples.AcidBase.AlbuminTitration,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.AcidBase.AlbuminTitration") translateModel(Bodylight.Chemical.Examples.AcidBase.AlbuminTitration,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.AcidBase.AlbuminTitration") [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 1.312e-06/1.312e-06, allocations: 0 / 347.9 MB, free: 2.027 MB / 314.7 MB Notification: Performance of FrontEnd - Absyn->SCode: time 2.706e-05/2.837e-05, allocations: 4.141 kB / 347.9 MB, free: 2.023 MB / 314.7 MB Notification: Performance of NFInst.instantiate(Bodylight.Chemical.Examples.AcidBase.AlbuminTitration): time 0.004379/0.004407, allocations: 3.337 MB / 351.3 MB, free: 14.67 MB / 330.7 MB Notification: Performance of NFInst.instExpressions: time 0.005833/0.01024, allocations: 3.653 MB / 354.9 MB, free: 11 MB / 330.7 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.000372/0.01061, allocations: 27.75 kB / 355 MB, free: 10.97 MB / 330.7 MB Notification: Performance of NFTyping.typeComponents: time 0.0002495/0.01086, allocations: 75.28 kB / 355 MB, free: 10.9 MB / 330.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.H3O.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.H3O.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.H3O.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.A.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.A.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.A.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.HA.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.HA.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.HA.Utilities.UnitConversions.findUnit'. Notification: Performance of NFTyping.typeBindings: time 0.00186/0.01272, allocations: 0.5634 MB / 355.6 MB, free: 10.33 MB / 330.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.H3O.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.H3O.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.A.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.A.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.HA.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.HA.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. Notification: Performance of NFTyping.typeClassSections: time 0.001835/0.01456, allocations: 0.6073 MB / 356.2 MB, free: 9.723 MB / 330.7 MB Notification: Performance of NFFlatten.flatten: time 0.05069/0.06524, allocations: 75.59 MB / 431.8 MB, free: 13.75 MB / 410.7 MB Notification: Performance of NFFlatten.resolveConnections: time 0.01189/0.07713, allocations: 9.317 MB / 441.1 MB, free: 4.305 MB / 410.7 MB Notification: Performance of NFEvalConstants.evaluate: time 0.3295/0.4066, allocations: 36.89 MB / 478 MB, free: 53.93 MB / 410.8 MB Notification: Performance of NFSimplifyModel.simplify: time 0.0611/0.4677, allocations: 64.88 MB / 0.5302 GB, free: 30 MB / 410.8 MB Notification: Performance of NFPackage.collectConstants: time 0.01217/0.4799, allocations: 3.198 MB / 0.5333 GB, free: 29.2 MB / 410.8 MB Notification: Performance of NFFlatten.collectFunctions: time 0.01728/0.4972, allocations: 3.527 MB / 0.5367 GB, free: 25.67 MB / 410.8 MB Notification: Performance of NFScalarize.scalarize: time 0.01913/0.5163, allocations: 14.69 MB / 0.5511 GB, free: 13.5 MB / 410.8 MB Notification: Performance of NFVerifyModel.verify: time 0.03542/0.5517, allocations: 18.71 MB / 0.5693 GB, free: 13.41 MB / 426.8 MB Notification: Performance of NFConvertDAE.convert: time 0.3426/0.8943, allocations: 56.83 MB / 0.6248 GB, free: 48.91 MB / 442.9 MB Notification: Performance of FrontEnd - DAE generated: time 7.734e-06/0.8943, allocations: 0 / 0.6248 GB, free: 48.91 MB / 442.9 MB Notification: Performance of FrontEnd: time 1.553e-06/0.8943, allocations: 0 / 0.6248 GB, free: 48.91 MB / 442.9 MB Notification: Performance of Transformations before backend: time 0.002895/0.8972, allocations: 0 / 0.6248 GB, free: 48.91 MB / 442.9 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 7426 * Number of variables: 7426 Notification: Performance of Generate backend data structure: time 0.1069/1.004, allocations: 64.72 MB / 0.6881 GB, free: 20.98 MB / 442.9 MB Notification: Performance of prepare preOptimizeDAE: time 3.768e-05/1.004, allocations: 11.73 kB / 0.6881 GB, free: 20.98 MB / 442.9 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0251/1.029, allocations: 10.01 MB / 0.6978 GB, free: 17.39 MB / 442.9 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.07074/1.1, allocations: 34.03 MB / 0.7311 GB, free: 2.012 MB / 442.9 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.002012/1.102, allocations: 2.444 MB / 0.7335 GB, free: 15.79 MB / 458.9 MB Notification: Performance of preOpt expandDerOperator (simulation): time 0.008285/1.11, allocations: 3.209 MB / 0.7366 GB, free: 12.59 MB / 458.9 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.04216/1.152, allocations: 22.92 MB / 0.759 GB, free: 9.457 MB / 474.9 MB Notification: Performance of preOpt findStateOrder (simulation): time 0.0004095/1.153, allocations: 39.62 kB / 0.759 GB, free: 9.422 MB / 474.9 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.002424/1.155, allocations: 1.163 MB / 0.7602 GB, free: 8.262 MB / 474.9 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0004113/1.156, allocations: 0.6914 MB / 0.7608 GB, free: 7.57 MB / 474.9 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.2404/1.396, allocations: 9.025 MB / 0.7696 GB, free: 119 MB / 474.9 MB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.2537/1.65, allocations: 125.3 MB / 0.8921 GB, free: 40.17 MB / 474.9 MB Notification: Performance of preOpt comSubExp (simulation): time 0.01271/1.663, allocations: 12.38 MB / 0.9041 GB, free: 25.04 MB / 474.9 MB Notification: Performance of preOpt resolveLoops (simulation): time 0.004287/1.667, allocations: 5 MB / 0.909 GB, free: 19.09 MB / 474.9 MB Notification: Performance of preOpt evalFunc (simulation): time 0.000579/1.667, allocations: 369.9 kB / 0.9094 GB, free: 18.73 MB / 474.9 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0002174/1.668, allocations: 475.5 kB / 0.9098 GB, free: 18.25 MB / 474.9 MB Notification: Performance of pre-optimization done (n=1533): time 2.282e-05/1.668, allocations: 3.938 kB / 0.9098 GB, free: 18.24 MB / 474.9 MB Notification: Performance of matching and sorting (n=2409): time 1.995/3.663, allocations: 341.2 MB / 1.243 GB, free: 82.13 MB / 0.5263 GB Notification: Performance of inlineWhenForInitialization (initialization): time 0.0009193/3.664, allocations: 5.961 MB / 1.249 GB, free: 75.18 MB / 0.5263 GB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.06364/3.727, allocations: 53.5 MB / 1.301 GB, free: 50.72 MB / 0.5263 GB Notification: Performance of collectPreVariables (initialization): time 0.005723/3.733, allocations: 0.5703 MB / 1.302 GB, free: 50.57 MB / 0.5263 GB Notification: Performance of collectInitialEqns (initialization): time 0.02034/3.753, allocations: 32.47 MB / 1.333 GB, free: 21.57 MB / 0.5263 GB Notification: Performance of collectInitialBindings (initialization): time 0.01494/3.768, allocations: 12.51 MB / 1.346 GB, free: 8.98 MB / 0.5263 GB Notification: Performance of simplifyInitialFunctions (initialization): time 0.01672/3.785, allocations: 11.5 MB / 1.357 GB, free: 13.46 MB / 0.5419 GB Notification: Performance of setup shared object (initialization): time 9.586e-05/3.785, allocations: 476.8 kB / 1.357 GB, free: 12.99 MB / 0.5419 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.2774/4.062, allocations: 5.227 MB / 1.362 GB, free: 105.8 MB / 0.5419 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.03758/4.1, allocations: 37.54 MB / 1.399 GB, free: 66.82 MB / 0.5419 GB Notification: Performance of analyzeInitialSystem (initialization): time 0.06264/4.163, allocations: 62.33 MB / 1.46 GB, free: 25.85 MB / 0.5419 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.001097/4.164, allocations: 206 kB / 1.46 GB, free: 25.85 MB / 0.5419 GB Notification: Performance of matching and sorting (n=6120) (initialization): time 1.023/5.186, allocations: 198.8 MB / 1.654 GB, free: 63.84 MB / 0.5888 GB Notification: Performance of prepare postOptimizeDAE: time 0.0007001/5.187, allocations: 315 kB / 1.655 GB, free: 63.84 MB / 0.5888 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.001109/5.188, allocations: 0.7025 MB / 1.655 GB, free: 63.84 MB / 0.5888 GB Notification: Tearing is skipped for strong component 2 because system size of 873 exceeds maximum system size for tearing of linear systems (200). To adjust the maximum system size for tearing use --maxSizeLinearTearing=. Notification: Performance of postOpt tearingSystem (initialization): time 6.222/11.41, allocations: 3.543 GB / 5.198 GB, free: 172.3 MB / 0.6825 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.01587/11.43, allocations: 7.782 MB / 5.206 GB, free: 166.3 MB / 0.6825 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.179/11.61, allocations: 75.99 MB / 5.28 GB, free: 129.1 MB / 0.6825 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.04938/11.65, allocations: 2.701 MB / 5.283 GB, free: 127.5 MB / 0.6825 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.01017/11.66, allocations: 2.171 MB / 5.285 GB, free: 125.9 MB / 0.6825 GB Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 3277 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (4376): * Single equations (assignments): 4374 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 1 * Torn equation systems: 1 * Mixed (continuous/discrete) equation systems: 0 Notification: Equation system details (not torn): * Constant Jacobian (size): 0 systems * Linear Jacobian (size,density): 1 system {(873,0.3%)} * Non-linear Jacobian (size): 0 systems * Without analytic Jacobian (size): 0 systems Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 0 systems * Non-linear torn systems (#iteration vars, #inner vars): 1 system {(437,436)} Notification: Performance of prepare postOptimizeDAE: time 0.02214/11.69, allocations: 3.356 MB / 5.288 GB, free: 123.6 MB / 0.6825 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.01953/11.71, allocations: 6.239 MB / 5.294 GB, free: 117.3 MB / 0.6825 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.02108/11.73, allocations: 7.498 MB / 5.301 GB, free: 110.6 MB / 0.6825 GB Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0001546/11.73, allocations: 276 kB / 5.302 GB, free: 110.3 MB / 0.6825 GB Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0004233/11.73, allocations: 186.6 kB / 5.302 GB, free: 110.2 MB / 0.6825 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.0002095/11.73, allocations: 173.6 kB / 5.302 GB, free: 110.1 MB / 0.6825 GB Notification: Performance of postOpt removeSimpleEquations (simulation): time 1.018/12.75, allocations: 204.6 MB / 5.502 GB, free: 160.6 MB / 0.6825 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0001811/12.75, allocations: 51.06 kB / 5.502 GB, free: 160.6 MB / 0.6825 GB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.003792/12.75, allocations: 1.142 MB / 5.503 GB, free: 160.5 MB / 0.6825 GB Notification: Tearing is skipped for strong component 4 because system size of 873 exceeds maximum system size for tearing of linear systems (200). To adjust the maximum system size for tearing use --maxSizeLinearTearing=. Notification: Performance of postOpt tearingSystem (simulation): time 0.3709/13.12, allocations: 182.5 MB / 5.681 GB, free: 17.14 MB / 0.6825 GB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.006317/13.13, allocations: 0.8384 MB / 5.682 GB, free: 16.62 MB / 0.6825 GB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.4866/13.61, allocations: 68.46 MB / 5.749 GB, free: 194.6 MB / 0.6825 GB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.895e-05/13.61, allocations: 79.66 kB / 5.749 GB, free: 194.6 MB / 0.6825 GB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.7379/14.35, allocations: 214 MB / 5.958 GB, free: 21.73 MB / 0.6825 GB Notification: Performance of postOpt removeConstants (simulation): time 0.02736/14.38, allocations: 8.823 MB / 5.966 GB, free: 12.86 MB / 0.6825 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.01316/14.39, allocations: 0.6247 MB / 5.967 GB, free: 12.23 MB / 0.6825 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.03196/14.42, allocations: 0.9659 MB / 5.968 GB, free: 11.32 MB / 0.6825 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.01514/14.44, allocations: 3.031 MB / 5.971 GB, free: 8.281 MB / 0.6825 GB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.003912/14.44, allocations: 0.6634 MB / 5.972 GB, free: 7.617 MB / 0.6825 GB Notification: Performance of sorting global known variables: time 0.3734/14.82, allocations: 32.98 MB / 6.004 GB, free: 188.9 MB / 0.6825 GB Notification: Performance of sort global known variables: time 2.81e-07/14.82, allocations: 0 / 6.004 GB, free: 188.9 MB / 0.6825 GB Notification: Performance of remove unused functions: time 0.08658/14.9, allocations: 18.05 MB / 6.021 GB, free: 188.9 MB / 0.6825 GB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 221 * Number of states: 219 (electroneutrality.state[1],molarConservationLaw[218].state[1],molarConservationLaw[217].state[1],molarConservationLaw[216].state[1],molarConservationLaw[215].state[1],molarConservationLaw[214].state[1],molarConservationLaw[213].state[1],molarConservationLaw[212].state[1],molarConservationLaw[211].state[1],molarConservationLaw[210].state[1],molarConservationLaw[209].state[1],molarConservationLaw[208].state[1],molarConservationLaw[207].state[1],molarConservationLaw[206].state[1],molarConservationLaw[205].state[1],molarConservationLaw[204].state[1],molarConservationLaw[203].state[1],molarConservationLaw[202].state[1],molarConservationLaw[201].state[1],molarConservationLaw[200].state[1],molarConservationLaw[199].state[1],molarConservationLaw[198].state[1],molarConservationLaw[197].state[1],molarConservationLaw[196].state[1],molarConservationLaw[195].state[1],molarConservationLaw[194].state[1],molarConservationLaw[193].state[1],molarConservationLaw[192].state[1],molarConservationLaw[191].state[1],molarConservationLaw[190].state[1],molarConservationLaw[189].state[1],molarConservationLaw[188].state[1],molarConservationLaw[187].state[1],molarConservationLaw[186].state[1],molarConservationLaw[185].state[1],molarConservationLaw[184].state[1],molarConservationLaw[183].state[1],molarConservationLaw[182].state[1],molarConservationLaw[181].state[1],molarConservationLaw[180].state[1],molarConservationLaw[179].state[1],molarConservationLaw[178].state[1],molarConservationLaw[177].state[1],molarConservationLaw[176].state[1],molarConservationLaw[175].state[1],molarConservationLaw[174].state[1],molarConservationLaw[173].state[1],molarConservationLaw[172].state[1],molarConservationLaw[171].state[1],molarConservationLaw[170].state[1],molarConservationLaw[169].state[1],molarConservationLaw[168].state[1],molarConservationLaw[167].state[1],molarConservationLaw[166].state[1],molarConservationLaw[165].state[1],molarConservationLaw[164].state[1],molarConservationLaw[163].state[1],molarConservationLaw[162].state[1],molarConservationLaw[161].state[1],molarConservationLaw[160].state[1],molarConservationLaw[159].state[1],molarConservationLaw[158].state[1],molarConservationLaw[157].state[1],molarConservationLaw[156].state[1],molarConservationLaw[155].state[1],molarConservationLaw[154].state[1],molarConservationLaw[153].state[1],molarConservationLaw[152].state[1],molarConservationLaw[151].state[1],molarConservationLaw[150].state[1],molarConservationLaw[149].state[1],molarConservationLaw[148].state[1],molarConservationLaw[147].state[1],molarConservationLaw[146].state[1],molarConservationLaw[145].state[1],molarConservationLaw[144].state[1],molarConservationLaw[143].state[1],molarConservationLaw[142].state[1],molarConservationLaw[141].state[1],molarConservationLaw[140].state[1],molarConservationLaw[139].state[1],molarConservationLaw[138].state[1],molarConservationLaw[137].state[1],molarConservationLaw[136].state[1],molarConservationLaw[135].state[1],molarConservationLaw[134].state[1],molarConservationLaw[133].state[1],molarConservationLaw[132].state[1],molarConservationLaw[131].state[1],molarConservationLaw[130].state[1],molarConservationLaw[129].state[1],molarConservationLaw[128].state[1],molarConservationLaw[127].state[1],molarConservationLaw[126].state[1],molarConservationLaw[125].state[1],molarConservationLaw[124].state[1],molarConservationLaw[123].state[1],molarConservationLaw[122].state[1],molarConservationLaw[121].state[1],molarConservationLaw[120].state[1],molarConservationLaw[119].state[1],molarConservationLaw[118].state[1],molarConservationLaw[117].state[1],molarConservationLaw[116].state[1],molarConservationLaw[115].state[1],molarConservationLaw[114].state[1],molarConservationLaw[113].state[1],molarConservationLaw[112].state[1],molarConservationLaw[111].state[1],molarConservationLaw[110].state[1],molarConservationLaw[109].state[1],molarConservationLaw[108].state[1],molarConservationLaw[107].state[1],molarConservationLaw[106].state[1],molarConservationLaw[105].state[1],molarConservationLaw[104].state[1],molarConservationLaw[103].state[1],molarConservationLaw[102].state[1],molarConservationLaw[101].state[1],molarConservationLaw[100].state[1],molarConservationLaw[99].state[1],molarConservationLaw[98].state[1],molarConservationLaw[97].state[1],molarConservationLaw[96].state[1],molarConservationLaw[95].state[1],molarConservationLaw[94].state[1],molarConservationLaw[93].state[1],molarConservationLaw[92].state[1],molarConservationLaw[91].state[1],molarConservationLaw[90].state[1],molarConservationLaw[89].state[1],molarConservationLaw[88].state[1],molarConservationLaw[87].state[1],molarConservationLaw[86].state[1],molarConservationLaw[85].state[1],molarConservationLaw[84].state[1],molarConservationLaw[83].state[1],molarConservationLaw[82].state[1],molarConservationLaw[81].state[1],molarConservationLaw[80].state[1],molarConservationLaw[79].state[1],molarConservationLaw[78].state[1],molarConservationLaw[77].state[1],molarConservationLaw[76].state[1],molarConservationLaw[75].state[1],molarConservationLaw[74].state[1],molarConservationLaw[73].state[1],molarConservationLaw[72].state[1],molarConservationLaw[71].state[1],molarConservationLaw[70].state[1],molarConservationLaw[69].state[1],molarConservationLaw[68].state[1],molarConservationLaw[67].state[1],molarConservationLaw[66].state[1],molarConservationLaw[65].state[1],molarConservationLaw[64].state[1],molarConservationLaw[63].state[1],molarConservationLaw[62].state[1],molarConservationLaw[61].state[1],molarConservationLaw[60].state[1],molarConservationLaw[59].state[1],molarConservationLaw[58].state[1],molarConservationLaw[57].state[1],molarConservationLaw[56].state[1],molarConservationLaw[55].state[1],molarConservationLaw[54].state[1],molarConservationLaw[53].state[1],molarConservationLaw[52].state[1],molarConservationLaw[51].state[1],molarConservationLaw[50].state[1],molarConservationLaw[49].state[1],molarConservationLaw[48].state[1],molarConservationLaw[47].state[1],molarConservationLaw[46].state[1],molarConservationLaw[45].state[1],molarConservationLaw[44].state[1],molarConservationLaw[43].state[1],molarConservationLaw[42].state[1],molarConservationLaw[41].state[1],molarConservationLaw[40].state[1],molarConservationLaw[39].state[1],molarConservationLaw[38].state[1],molarConservationLaw[37].state[1],molarConservationLaw[36].state[1],molarConservationLaw[35].state[1],molarConservationLaw[34].state[1],molarConservationLaw[33].state[1],molarConservationLaw[32].state[1],molarConservationLaw[31].state[1],molarConservationLaw[30].state[1],molarConservationLaw[29].state[1],molarConservationLaw[28].state[1],molarConservationLaw[27].state[1],molarConservationLaw[26].state[1],molarConservationLaw[25].state[1],molarConservationLaw[24].state[1],molarConservationLaw[23].state[1],molarConservationLaw[22].state[1],molarConservationLaw[21].state[1],molarConservationLaw[20].state[1],molarConservationLaw[19].state[1],molarConservationLaw[18].state[1],molarConservationLaw[17].state[1],molarConservationLaw[16].state[1],molarConservationLaw[15].state[1],molarConservationLaw[14].state[1],molarConservationLaw[13].state[1],molarConservationLaw[12].state[1],molarConservationLaw[11].state[1],molarConservationLaw[10].state[1],molarConservationLaw[9].state[1],molarConservationLaw[8].state[1],molarConservationLaw[7].state[1],molarConservationLaw[6].state[1],molarConservationLaw[5].state[1],molarConservationLaw[4].state[1],molarConservationLaw[3].state[1],molarConservationLaw[2].state[1],molarConservationLaw[1].state[1]) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (665): * Single equations (assignments): 663 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 1 * Torn equation systems: 1 * Mixed (continuous/discrete) equation systems: 0 Notification: Equation system details (not torn): * Constant Jacobian (size): 0 systems * Linear Jacobian (size,density): 1 system {(873,0.3%)} * Non-linear Jacobian (size): 0 systems * Without analytic Jacobian (size): 0 systems Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 0 systems * Non-linear torn systems (#iteration vars, #inner vars): 1 system {(437,436)} Notification: Performance of Backend phase and start with SimCode phase: time 0.006246/14.91, allocations: 0.8823 MB / 6.022 GB, free: 188.7 MB / 0.6825 GB Notification: Performance of simCode: created initialization part: time 0.09351/15, allocations: 38.08 MB / 6.06 GB, free: 183.6 MB / 0.6825 GB Notification: Performance of simCode: created event and clocks part: time 2.704e-05/15, allocations: 8 kB / 6.06 GB, free: 183.6 MB / 0.6825 GB Notification: Performance of simCode: created simulation system equations: time 0.06142/15.06, allocations: 22.04 MB / 6.081 GB, free: 169.5 MB / 0.6825 GB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.09029/15.15, allocations: 12.27 MB / 6.093 GB, free: 160 MB / 0.6825 GB Error: Error parsing unit kcal: Unit not found Error: Error parsing unit meq: Unit not found Error: Error parsing unit kcal/min: Unit not found Error: Error parsing unit kcal/mol: Unit not found Error: Error parsing unit %: Parse error Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.1699/15.32, allocations: 98.54 MB / 6.189 GB, free: 68.91 MB / 0.6825 GB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.02501/15.35, allocations: 12.59 MB / 6.202 GB, free: 56.27 MB / 0.6825 GB Notification: Performance of simCode: alias equations: time 0.02041/15.37, allocations: 4.841 MB / 6.206 GB, free: 52.14 MB / 0.6825 GB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.02235/15.39, allocations: 9.276 MB / 6.215 GB, free: 42.85 MB / 0.6825 GB Notification: Performance of SimCode: time 1.493e-06/15.39, allocations: 0 / 6.215 GB, free: 42.85 MB / 0.6825 GB Notification: Performance of Templates: time 3.054/18.45, allocations: 1.432 GB / 7.647 GB, free: 23.04 MB / 0.6825 GB " [Timeout remaining time 642] make -j1 -f Bodylight_Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.makefile [Timeout 660] (rm -f Bodylight_Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.pipe ; mkfifo Bodylight_Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.pipe ; head -c 1048576 < Bodylight_Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.pipe >> ../files/Bodylight_Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.sim & ./Bodylight_Bodylight.Chemical.Examples.AcidBase.AlbuminTitration -abortSlowSimulation -alarm=240 -lv LOG_STATS > Bodylight_Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.pipe 2>&1) [Timeout 240] [Calling sys.exit(0), Time elapsed: 75.8061541877687]