Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001504/0.001504, allocations: 114.3 kB / 18.94 MB, free: 2.934 MB / 14.72 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001393/0.001393, allocations: 216 kB / 22.25 MB, free: 5.082 MB / 14.72 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.364/1.364, allocations: 230.6 MB / 256 MB, free: 8.008 MB / 206.1 MB
"
[Timeout remaining time 178]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.128/0.128, allocations: 23.88 MB / 336.3 MB, free: 11.17 MB / 270.1 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: "" <> buildModelFMU(Chemical.Obsolete.Examples.Hemoglobin.Joels57,fileNamePrefix="Chemical_master_Chemical_Obsolete_Examples_Hemoglobin_Joels57",fmuType="me",version="2.0",platforms={"static"})
"" <> buildModelFMU(Chemical.Obsolete.Examples.Hemoglobin.Joels57,fileNamePrefix="Chemical_master_Chemical_Obsolete_Examples_Hemoglobin_Joels57",fmuType="me",version="2.0",platforms={"static"}) [Timeout 660]
"Notification: Chemical requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed.
Notification: Performance of FrontEnd - loaded program: time 0.001992/0.001992, allocations: 67.89 kB / 471.2 MB, free: 7.645 MB / 334.1 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.2757/0.2777, allocations: 59.87 MB / 0.5187 GB, free: 9.613 MB / 382.1 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14335:7-14335:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14335:7-14335:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.Joels57): time 0.09084/0.3686, allocations: 83.62 MB / 0.6003 GB, free: 6.367 MB / 446.1 MB
Notification: Performance of NFInst.instExpressions: time 0.4836/0.8522, allocations: 218.1 MB / 0.8133 GB, free: 15.91 MB / 0.5606 GB
Notification: Performance of NFInst.updateImplicitVariability: time 0.0115/0.8637, allocations: 231.7 kB / 0.8136 GB, free: 15.91 MB / 0.5606 GB
Notification: Performance of NFTyping.typeComponents: time 0.0127/0.8764, allocations: 4.911 MB / 0.8184 GB, free: 14.76 MB / 0.5606 GB
Notification: Performance of NFTyping.typeBindings: time 0.04347/0.9199, allocations: 17.9 MB / 0.8358 GB, free: 7.316 MB / 0.5606 GB
Notification: Performance of NFTyping.typeClassSections: time 0.06991/0.9898, allocations: 32.63 MB / 0.8677 GB, free: 1.555 MB / 0.5762 GB
Notification: Performance of NFFlatten.flatten: time 0.09258/1.082, allocations: 89.19 MB / 0.9548 GB, free: 8.984 MB / 0.67 GB
Notification: Performance of NFFlatten.resolveConnections: time 0.6643/1.747, allocations: 52.31 MB / 1.006 GB, free: 10.99 MB / 0.7013 GB
Notification: Performance of NFEvalConstants.evaluate: time 0.073/1.82, allocations: 56.51 MB / 1.061 GB, free: 8.031 MB / 0.7013 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.08174/1.901, allocations: 52.04 MB / 1.112 GB, free: 2.602 MB / 0.7013 GB
Notification: Performance of NFPackage.collectConstants: time 0.05371/1.955, allocations: 14 MB / 1.126 GB, free: 12.85 MB / 0.7169 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.109/2.064, allocations: 35.44 MB / 1.16 GB, free: 20 kB / 0.7325 GB
Notification: Performance of NFScalarize.scalarize: time 0.04705/2.111, allocations: 24.02 MB / 1.184 GB, free: 10.59 MB / 0.7638 GB
Notification: Performance of NFVerifyModel.verify: time 0.07555/2.187, allocations: 40.57 MB / 1.223 GB, free: 2.715 MB / 0.795 GB
Notification: Performance of NFConvertDAE.convert: time 0.8639/3.051, allocations: 159.5 MB / 1.379 GB, free: 146.6 MB / 0.8577 GB
Notification: Performance of FrontEnd - DAE generated: time 7.023e-06/3.051, allocations: 0 / 1.379 GB, free: 146.6 MB / 0.8577 GB
Notification: Performance of FrontEnd: time 2.013e-06/3.051, allocations: 2.469 kB / 1.379 GB, free: 146.6 MB / 0.8577 GB
Notification: Performance of Transformations before backend: time 0.003273/3.054, allocations: 0 / 1.379 GB, free: 146.6 MB / 0.8577 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 11424
 * Number of variables: 11424
Notification: Performance of Generate backend data structure: time 0.2657/3.32, allocations: 71.73 MB / 1.449 GB, free: 114.7 MB / 0.8577 GB
Notification: Performance of prepare preOptimizeDAE: time 4.894e-05/3.32, allocations: 9.125 kB / 1.449 GB, free: 114.7 MB / 0.8577 GB
Notification: Performance of preOpt introduceOutputAliases (simulation): time 0.03683/3.356, allocations: 5.959 MB / 1.455 GB, free: 113.3 MB / 0.8577 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.08415/3.441, allocations: 11.94 MB / 1.467 GB, free: 108.6 MB / 0.8577 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.09946/3.54, allocations: 42.62 MB / 1.508 GB, free: 76.73 MB / 0.8577 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.005631/3.546, allocations: 9.239 MB / 1.517 GB, free: 66.16 MB / 0.8577 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.03612/3.582, allocations: 4.597 MB / 1.522 GB, free: 61.56 MB / 0.8577 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.5836/4.165, allocations: 112.9 MB / 1.632 GB, free: 280.3 MB / 0.8733 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.002114/4.168, allocations: 31.69 kB / 1.632 GB, free: 280.3 MB / 0.8733 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.03137/4.199, allocations: 1.758 MB / 1.634 GB, free: 280.3 MB / 0.8733 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0009985/4.2, allocations: 1.058 MB / 1.635 GB, free: 280.3 MB / 0.8733 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.2832/4.483, allocations: 153.9 MB / 1.785 GB, free: 190 MB / 0.8733 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 1.159/5.642, allocations: 438.7 MB / 2.213 GB, free: 131.4 MB / 0.8733 GB
Notification: Performance of preOpt comSubExp (simulation): time 2.41/8.052, allocations: 0.6704 GB / 2.884 GB, free: 194.6 MB / 0.8733 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.1056/8.158, allocations: 60.08 MB / 2.943 GB, free: 150.1 MB / 0.8733 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.9119/9.069, allocations: 270 MB / 3.206 GB, free: 215.6 MB / 0.8733 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0002183/9.07, allocations: 335.5 kB / 3.207 GB, free: 215.3 MB / 0.8733 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.09479/9.164, allocations: 29.35 MB / 3.235 GB, free: 200.7 MB / 0.8733 GB
Notification: Performance of pre-optimization done (n=2985): time 0.0001737/9.165, allocations: 0 / 3.235 GB, free: 200.7 MB / 0.8733 GB
Notification: Performance of matching and sorting (n=3387): time 2.357/11.52, allocations: 423.8 MB / 3.649 GB, free: 124.8 MB / 0.8733 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0001986/11.52, allocations: 453.3 kB / 3.649 GB, free: 124.3 MB / 0.8733 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.05008/11.57, allocations: 32.27 MB / 3.681 GB, free: 92.52 MB / 0.8733 GB
Notification: Performance of collectPreVariables (initialization): time 0.01379/11.59, allocations: 0.5681 MB / 3.682 GB, free: 91.95 MB / 0.8733 GB
Notification: Performance of collectInitialEqns (initialization): time 0.01644/11.6, allocations: 21.74 MB / 3.703 GB, free: 70.24 MB / 0.8733 GB
Notification: Performance of collectInitialBindings (initialization): time 0.02262/11.62, allocations: 12.41 MB / 3.715 GB, free: 57.98 MB / 0.8733 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.04817/11.67, allocations: 9.93 MB / 3.725 GB, free: 48.03 MB / 0.8733 GB
Notification: Performance of setup shared object (initialization): time 3.687e-05/11.67, allocations: 305.1 kB / 3.725 GB, free: 47.73 MB / 0.8733 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.425/12.1, allocations: 39.04 MB / 3.763 GB, free: 246 MB / 0.8733 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.07972/12.18, allocations: 53.24 MB / 3.815 GB, free: 219.7 MB / 0.8733 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.157/12.33, allocations: 96.37 MB / 3.909 GB, free: 165.2 MB / 0.8733 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0006476/12.34, allocations: 126.6 kB / 3.909 GB, free: 165.2 MB / 0.8733 GB
Notification: Performance of matching and sorting (n=5667) (initialization): time 1.667/14, allocations: 257.3 MB / 4.16 GB, free: 191.5 MB / 0.8733 GB
Notification: Performance of prepare postOptimizeDAE: time 0.0003394/14, allocations: 198.9 kB / 4.161 GB, free: 191.4 MB / 0.8733 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0007025/14, allocations: 445.4 kB / 4.161 GB, free: 191.4 MB / 0.8733 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.1692/14.17, allocations: 73.71 MB / 4.233 GB, free: 156.9 MB / 0.8733 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.04733/14.22, allocations: 11.18 MB / 4.244 GB, free: 151 MB / 0.8733 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.8929/15.11, allocations: 314.2 MB / 4.551 GB, free: 151 MB / 0.8733 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.05272/15.17, allocations: 2.475 MB / 4.553 GB, free: 149.7 MB / 0.8733 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.01571/15.18, allocations: 2.796 MB / 4.556 GB, free: 148.7 MB / 0.8733 GB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 2031
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (5523):
 * Single equations (assignments): 5514
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.0472/15.23, allocations: 18.34 MB / 4.574 GB, free: 137.8 MB / 0.8733 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.02031/15.25, allocations: 3.32 MB / 4.577 GB, free: 136.5 MB / 0.8733 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 1.156/16.41, allocations: 152.4 MB / 4.726 GB, free: 188.8 MB / 0.8733 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0003804/16.41, allocations: 362.2 kB / 4.726 GB, free: 188.8 MB / 0.8733 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0003757/16.41, allocations: 55.08 kB / 4.726 GB, free: 188.8 MB / 0.8733 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.001134/16.41, allocations: 179.5 kB / 4.727 GB, free: 188.8 MB / 0.8733 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.9711/17.38, allocations: 239 MB / 4.96 GB, free: 71.76 MB / 0.8733 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.00044/17.38, allocations: 8.938 kB / 4.96 GB, free: 71.75 MB / 0.8733 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0416/17.42, allocations: 7.254 MB / 4.967 GB, free: 64.49 MB / 0.8733 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.09196/17.51, allocations: 39.75 MB / 5.006 GB, free: 25.01 MB / 0.8733 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.3789/17.89, allocations: 1.443 MB / 5.007 GB, free: 209.8 MB / 0.8733 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.3112/18.2, allocations: 158.7 MB / 5.162 GB, free: 164 MB / 0.8733 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 7.754e-06/18.2, allocations: 15.34 kB / 5.162 GB, free: 164 MB / 0.8733 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 1.211/19.41, allocations: 200.4 MB / 5.358 GB, free: 176.9 MB / 0.8733 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.03825/19.45, allocations: 11.55 MB / 5.369 GB, free: 176.9 MB / 0.8733 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.01963/19.47, allocations: 0.9169 MB / 5.37 GB, free: 176.9 MB / 0.8733 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.04004/19.51, allocations: 1.549 MB / 5.372 GB, free: 176.9 MB / 0.8733 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0245/19.54, allocations: 4.685 MB / 5.376 GB, free: 176.9 MB / 0.8733 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.01322/19.55, allocations: 1.385 MB / 5.378 GB, free: 176.9 MB / 0.8733 GB
Notification: Performance of sorting global known variables: time 0.0438/19.59, allocations: 22.46 MB / 5.4 GB, free: 173.5 MB / 0.8733 GB
Notification: Performance of sort global known variables: time 1.5e-07/19.59, allocations: 0 / 5.4 GB, free: 173.5 MB / 0.8733 GB
Notification: Performance of remove unused functions: time 0.08654/19.68, allocations: 20.25 MB / 5.419 GB, free: 170.2 MB / 0.8733 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 45
 * Number of states: 180 (pCO2_2000.solution.temperature,pCO2_2000.O2_free.logn,pCO2_2000.H2O.logn,pCO2_2000.relaxed.OxyHm[1].logn,pCO2_2000.relaxed.OxyHm[2].logn,pCO2_2000.relaxed.OxyHm[3].logn,pCO2_2000.relaxed.OxyHm[4].logn,pCO2_2000.relaxed.DeoxyHm[1].logn,pCO2_2000.relaxed.DeoxyHm[2].logn,pCO2_2000.relaxed.DeoxyHm[3].logn,pCO2_2000.relaxed.DeoxyHm[4].logn,pCO2_2000.relaxed.HmAH[1].logn,pCO2_2000.relaxed.HmAH[2].logn,pCO2_2000.relaxed.HmAH[3].logn,pCO2_2000.relaxed.HmAH[4].logn,pCO2_2000.relaxed.HmA[1].logn,pCO2_2000.relaxed.HmA[2].logn,pCO2_2000.relaxed.HmA[3].logn,pCO2_2000.relaxed.HmA[4].logn,pCO2_2000.relaxed.HmNH3[1].logn,pCO2_2000.relaxed.HmNH3[2].logn,pCO2_2000.relaxed.HmNH3[3].logn,pCO2_2000.relaxed.HmNH3[4].logn,pCO2_2000.relaxed.HmNH2[1].logn,pCO2_2000.relaxed.HmNH2[2].logn,pCO2_2000.relaxed.HmNH2[3].logn,pCO2_2000.relaxed.HmNH2[4].logn,pCO2_2000.relaxed.HmNHCOO[1].logn,pCO2_2000.relaxed.HmNHCOO[2].logn,pCO2_2000.relaxed.HmNHCOO[3].logn,pCO2_2000.relaxed.HmNHCOO[4].logn,pCO2_2000.tensed.OxyHm[1].logn,pCO2_2000.tensed.OxyHm[2].logn,pCO2_2000.tensed.OxyHm[3].logn,pCO2_2000.tensed.OxyHm[4].logn,pCO2_2000.tensed.DeoxyHm[1].logn,pCO2_2000.tensed.DeoxyHm[2].logn,pCO2_2000.tensed.DeoxyHm[3].logn,pCO2_2000.tensed.DeoxyHm[4].logn,pCO2_2000.tensed.HmAH[1].logn,pCO2_2000.tensed.HmAH[2].logn,pCO2_2000.tensed.HmAH[3].logn,pCO2_2000.tensed.HmAH[4].logn,pCO2_2000.tensed.HmA[1].logn,pCO2_2000.tensed.HmA[2].logn,pCO2_2000.tensed.HmA[3].logn,pCO2_2000.tensed.HmA[4].logn,pCO2_2000.tensed.HmNH3[1].logn,pCO2_2000.tensed.HmNH3[2].logn,pCO2_2000.tensed.HmNH3[3].logn,pCO2_2000.tensed.HmNH3[4].logn,pCO2_2000.tensed.HmNH2[1].logn,pCO2_2000.tensed.HmNH2[2].logn,pCO2_2000.tensed.HmNH2[3].logn,pCO2_2000.tensed.HmNH2[4].logn,pCO2_2000.tensed.HmNHCOO[1].logn,pCO2_2000.tensed.HmNHCOO[2].logn,pCO2_2000.tensed.HmNHCOO[3].logn,pCO2_2000.tensed.HmNHCOO[4].logn,pCO2_2000.CO2_free.logn,pCO2_5330.solution.temperature,pCO2_5330.O2_free.logn,pCO2_5330.H2O.logn,pCO2_5330.relaxed.OxyHm[1].logn,pCO2_5330.relaxed.OxyHm[2].logn,pCO2_5330.relaxed.OxyHm[3].logn,pCO2_5330.relaxed.OxyHm[4].logn,pCO2_5330.relaxed.DeoxyHm[1].logn,pCO2_5330.relaxed.DeoxyHm[2].logn,pCO2_5330.relaxed.DeoxyHm[3].logn,pCO2_5330.relaxed.DeoxyHm[4].logn,pCO2_5330.relaxed.HmAH[1].logn,pCO2_5330.relaxed.HmAH[2].logn,pCO2_5330.relaxed.HmAH[3].logn,pCO2_5330.relaxed.HmAH[4].logn,pCO2_5330.relaxed.HmA[1].logn,pCO2_5330.relaxed.HmA[2].logn,pCO2_5330.relaxed.HmA[3].logn,pCO2_5330.relaxed.HmA[4].logn,pCO2_5330.relaxed.HmNH3[1].logn,pCO2_5330.relaxed.HmNH3[2].logn,pCO2_5330.relaxed.HmNH3[3].logn,pCO2_5330.relaxed.HmNH3[4].logn,pCO2_5330.relaxed.HmNH2[1].logn,pCO2_5330.relaxed.HmNH2[2].logn,pCO2_5330.relaxed.HmNH2[3].logn,pCO2_5330.relaxed.HmNH2[4].logn,pCO2_5330.relaxed.HmNHCOO[1].logn,pCO2_5330.relaxed.HmNHCOO[2].logn,pCO2_5330.relaxed.HmNHCOO[3].logn,pCO2_5330.relaxed.HmNHCOO[4].logn,pCO2_5330.tensed.OxyHm[1].logn,pCO2_5330.tensed.OxyHm[2].logn,pCO2_5330.tensed.OxyHm[3].logn,pCO2_5330.tensed.OxyHm[4].logn,pCO2_5330.tensed.DeoxyHm[1].logn,pCO2_5330.tensed.DeoxyHm[2].logn,pCO2_5330.tensed.DeoxyHm[3].logn,pCO2_5330.tensed.DeoxyHm[4].logn,pCO2_5330.tensed.HmAH[1].logn,pCO2_5330.tensed.HmAH[2].logn,pCO2_5330.tensed.HmAH[3].logn,pCO2_5330.tensed.HmAH[4].logn,pCO2_5330.tensed.HmA[1].logn,pCO2_5330.tensed.HmA[2].logn,pCO2_5330.tensed.HmA[3].logn,pCO2_5330.tensed.HmA[4].logn,pCO2_5330.tensed.HmNH3[1].logn,pCO2_5330.tensed.HmNH3[2].logn,pCO2_5330.tensed.HmNH3[3].logn,pCO2_5330.tensed.HmNH3[4].logn,pCO2_5330.tensed.HmNH2[1].logn,pCO2_5330.tensed.HmNH2[2].logn,pCO2_5330.tensed.HmNH2[3].logn,pCO2_5330.tensed.HmNH2[4].logn,pCO2_5330.tensed.HmNHCOO[1].logn,pCO2_5330.tensed.HmNHCOO[2].logn,pCO2_5330.tensed.HmNHCOO[3].logn,pCO2_5330.tensed.HmNHCOO[4].logn,pCO2_5330.CO2_free.logn,pCO2_9330.solution.temperature,pCO2_9330.O2_free.logn,pCO2_9330.H2O.logn,pCO2_9330.relaxed.OxyHm[1].logn,pCO2_9330.relaxed.OxyHm[2].logn,pCO2_9330.relaxed.OxyHm[3].logn,pCO2_9330.relaxed.OxyHm[4].logn,pCO2_9330.relaxed.DeoxyHm[1].logn,pCO2_9330.relaxed.DeoxyHm[2].logn,pCO2_9330.relaxed.DeoxyHm[3].logn,pCO2_9330.relaxed.DeoxyHm[4].logn,pCO2_9330.relaxed.HmAH[1].logn,pCO2_9330.relaxed.HmAH[2].logn,pCO2_9330.relaxed.HmAH[3].logn,pCO2_9330.relaxed.HmAH[4].logn,pCO2_9330.relaxed.HmA[1].logn,pCO2_9330.relaxed.HmA[2].logn,pCO2_9330.relaxed.HmA[3].logn,pCO2_9330.relaxed.HmA[4].logn,pCO2_9330.relaxed.HmNH3[1].logn,pCO2_9330.relaxed.HmNH3[2].logn,pCO2_9330.relaxed.HmNH3[3].logn,pCO2_9330.relaxed.HmNH3[4].logn,pCO2_9330.relaxed.HmNH2[1].logn,pCO2_9330.relaxed.HmNH2[2].logn,pCO2_9330.relaxed.HmNH2[3].logn,pCO2_9330.relaxed.HmNH2[4].logn,pCO2_9330.relaxed.HmNHCOO[1].logn,pCO2_9330.relaxed.HmNHCOO[2].logn,pCO2_9330.relaxed.HmNHCOO[3].logn,pCO2_9330.relaxed.HmNHCOO[4].logn,pCO2_9330.tensed.OxyHm[1].logn,pCO2_9330.tensed.OxyHm[2].logn,pCO2_9330.tensed.OxyHm[3].logn,pCO2_9330.tensed.OxyHm[4].logn,pCO2_9330.tensed.DeoxyHm[1].logn,pCO2_9330.tensed.DeoxyHm[2].logn,pCO2_9330.tensed.DeoxyHm[3].logn,pCO2_9330.tensed.DeoxyHm[4].logn,pCO2_9330.tensed.HmAH[1].logn,pCO2_9330.tensed.HmAH[2].logn,pCO2_9330.tensed.HmAH[3].logn,pCO2_9330.tensed.HmAH[4].logn,pCO2_9330.tensed.HmA[1].logn,pCO2_9330.tensed.HmA[2].logn,pCO2_9330.tensed.HmA[3].logn,pCO2_9330.tensed.HmA[4].logn,pCO2_9330.tensed.HmNH3[1].logn,pCO2_9330.tensed.HmNH3[2].logn,pCO2_9330.tensed.HmNH3[3].logn,pCO2_9330.tensed.HmNH3[4].logn,pCO2_9330.tensed.HmNH2[1].logn,pCO2_9330.tensed.HmNH2[2].logn,pCO2_9330.tensed.HmNH2[3].logn,pCO2_9330.tensed.HmNH2[4].logn,pCO2_9330.tensed.HmNHCOO[1].logn,pCO2_9330.tensed.HmNHCOO[2].logn,pCO2_9330.tensed.HmNHCOO[3].logn,pCO2_9330.tensed.HmNHCOO[4].logn,pCO2_9330.CO2_free.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (3702):
 * Single equations (assignments): 3693
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.8767/20.56, allocations: 211.9 MB / 5.626 GB, free: 38.77 MB / 0.8733 GB
Notification: Performance of simCode: created initialization part: time 0.5104/21.07, allocations: 85.29 MB / 5.71 GB, free: 264.2 MB / 0.8733 GB
Notification: Performance of simCode: created event and clocks part: time 1.318e-05/21.07, allocations: 6.453 kB / 5.71 GB, free: 264.2 MB / 0.8733 GB
Notification: Performance of simCode: created simulation system equations: time 0.1279/21.19, allocations: 54.54 MB / 5.763 GB, free: 246.7 MB / 0.8733 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.05937/21.25, allocations: 7.824 MB / 5.77 GB, free: 243.7 MB / 0.8733 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 3.815/25.07, allocations: 0.8513 GB / 6.622 GB, free: 162 MB / 0.8733 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.05762/25.13, allocations: 30.6 MB / 6.652 GB, free: 139.2 MB / 0.8733 GB
Notification: Performance of simCode: alias equations: time 0.05601/25.18, allocations: 15.63 MB / 6.667 GB, free: 123.9 MB / 0.8733 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.04958/25.23, allocations: 22.84 MB / 6.689 GB, free: 101 MB / 0.8733 GB
Notification: Performance of SimCode: time 1.312e-06/25.23, allocations: 0 / 6.689 GB, free: 101 MB / 0.8733 GB
Notification: Performance of buildModelFMU: Generate the FMI files: time 3.612/28.84, allocations: 1.413 GB / 8.102 GB, free: 108.5 MB / 0.8735 GB
Notification: Performance of buildModelFMU: Generate platform static: time 528.2/557, allocations: 7.703 kB / 8.102 GB, free: 108.5 MB / 0.8735 GB
"
[Timeout remaining time 102]
(rm -f Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; mkfifo Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; head -c 1048576 < Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe >> ../files/Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.sim & python3 -m fmpy simulate  --output-file Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57_res.csv --start-time 0 --stop-time 70 --timeout 50 --relative-tolerance 1e-05 --interface-type ModelExchange --solver CVode --output-interval 0.028 Chemical_master_Chemical_Obsolete_Examples_Hemoglobin_Joels57.fmu > Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe 2>&1) [Timeout 52.5]
[Calling sys.exit(0), Time elapsed: 563.0750531500016]
Failed to read output from testmodel.py, exit status != 0:
557.7455924780006 557.764797326 554.710101421
Calling exit ...
<OMPython.OMCSessionZMQ object at 0x7faf754aef50>