Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Examples.Hemoglobin.Joels57.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1-master/package.mo", uses=false)
Using package Chemical with version 1.4.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1-master/package.mo)
Using package Modelica with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo)
Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo)
Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo)
Running command: translateModel(Chemical.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Chemical_Chemical.Examples.Hemoglobin.Joels57")
translateModel(Chemical.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Chemical_Chemical.Examples.Hemoglobin.Joels57")
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.001167/0.001167, allocations: 108 kB / 15.6 MB, free: 132 kB / 14.72 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.001193/0.001193, allocations: 198.9 kB / 16.54 MB, free: 6.672 MB / 14.72 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo): time 1.197/1.197, allocations: 222.9 MB / 240.2 MB, free: 4.406 MB / 190.1 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1-master/package.mo): time 0.161/0.161, allocations: 15.32 MB / 305.7 MB, free: 15.28 MB / 254.1 MB
Warning: Ignoring unknown experiment annotation option: __Dymola_NumberOfIntervals = 50000
Warning: Ignoring unknown experiment annotation option: __Dymola_Algorithm = "Dassl"
Warning: Ignoring unknown experiment annotation option: __Dymola_NumberOfIntervals = 50000
Warning: Ignoring unknown experiment annotation option: __Dymola_Algorithm = "Dassl"
Notification: Performance of FrontEnd - loaded program: time 0.001129/0.001129, allocations: 67.89 kB / 370.3 MB, free: 3.938 MB / 302.1 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.08335/0.08449, allocations: 53.61 MB / 423.9 MB, free: 14.28 MB / 366.1 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1-master/package.mo:4740:7-4740:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1-master/package.mo:4740:7-4740:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer "system" component but
an inner "system" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Examples.Hemoglobin.Joels57): time 0.2115/0.2961, allocations: 81.76 MB / 0.4939 GB, free: 9.676 MB / 366.1 MB
Notification: Performance of NFInst.instExpressions: time 0.362/0.658, allocations: 216.8 MB / 0.7056 GB, free: 13.54 MB / 478.1 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.009394/0.6675, allocations: 167.8 kB / 0.7058 GB, free: 13.48 MB / 478.1 MB
Notification: Performance of NFTyping.typeComponents: time 0.01185/0.6793, allocations: 4.882 MB / 0.7105 GB, free: 10.36 MB / 478.1 MB
Notification: Performance of NFTyping.typeBindings: time 0.04307/0.7224, allocations: 17.62 MB / 0.7277 GB, free: 15.05 MB / 494.1 MB
Notification: Performance of NFTyping.typeClassSections: time 0.07006/0.7925, allocations: 32.13 MB / 0.7591 GB, free: 6.879 MB / 0.4981 GB
Notification: Performance of NFFlatten.flatten: time 0.4856/1.278, allocations: 88.84 MB / 0.8459 GB, free: 7.125 MB / 0.545 GB
Notification: Performance of NFFlatten.resolveConnections: time 0.07227/1.35, allocations: 72.4 MB / 0.9166 GB, free: 13.12 MB / 0.5607 GB
Notification: Performance of NFEvalConstants.evaluate: time 0.07341/1.424, allocations: 55.38 MB / 0.9706 GB, free: 9.207 MB / 0.6075 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.07347/1.497, allocations: 50.42 MB / 1.02 GB, free: 8.391 MB / 0.6544 GB
Notification: Performance of NFPackage.collectConstants: time 0.0311/1.529, allocations: 12.06 MB / 1.032 GB, free: 12.32 MB / 0.67 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.5854/2.114, allocations: 35 MB / 1.066 GB, free: 64.1 MB / 0.6702 GB
Notification: Performance of NFScalarize.scalarize: time 0.03216/2.146, allocations: 23.71 MB / 1.089 GB, free: 64.1 MB / 0.6702 GB
Notification: Performance of NFVerifyModel.verify: time 0.07031/2.217, allocations: 40.3 MB / 1.128 GB, free: 59.67 MB / 0.6702 GB
Notification: Performance of NFConvertDAE.convert: time 0.1689/2.385, allocations: 147.2 MB / 1.272 GB, free: 2.531 MB / 0.6858 GB
Notification: Performance of FrontEnd - DAE generated: time 9.197e-06/2.386, allocations: 3.938 kB / 1.272 GB, free: 2.531 MB / 0.6858 GB
Notification: Performance of FrontEnd: time 1.914e-06/2.386, allocations: 3.562 kB / 1.272 GB, free: 2.531 MB / 0.6858 GB
Notification: Performance of Transformations before backend: time 0.002786/2.388, allocations: 0 / 1.272 GB, free: 2.531 MB / 0.6858 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 11424
 * Number of variables: 11424
Notification: Performance of Generate backend data structure: time 0.6433/3.032, allocations: 74.82 MB / 1.345 GB, free: 213.1 MB / 0.7017 GB
Notification: Performance of prepare preOptimizeDAE: time 3.553e-05/3.032, allocations: 7.906 kB / 1.345 GB, free: 213.1 MB / 0.7017 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.06982/3.101, allocations: 11.69 MB / 1.357 GB, free: 209.6 MB / 0.7017 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.07721/3.179, allocations: 39.84 MB / 1.396 GB, free: 187.1 MB / 0.7017 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.004455/3.183, allocations: 6.423 MB / 1.402 GB, free: 180.1 MB / 0.7017 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.02592/3.209, allocations: 4.59 MB / 1.406 GB, free: 175.6 MB / 0.7017 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.223/3.432, allocations: 111.5 MB / 1.515 GB, free: 66.3 MB / 0.7017 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.001657/3.434, allocations: 27.69 kB / 1.515 GB, free: 66.27 MB / 0.7017 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.02273/3.457, allocations: 1.762 MB / 1.517 GB, free: 64.51 MB / 0.7017 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0005425/3.457, allocations: 1.055 MB / 1.518 GB, free: 63.45 MB / 0.7017 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.4473/3.904, allocations: 151 MB / 1.665 GB, free: 175.2 MB / 0.7017 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.9394/4.844, allocations: 428.9 MB / 2.084 GB, free: 45.59 MB / 0.7017 GB
Notification: Performance of preOpt comSubExp (simulation): time 2.369/7.213, allocations: 0.8165 GB / 2.901 GB, free: 38.62 MB / 0.7017 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.3319/7.545, allocations: 63.94 MB / 2.963 GB, free: 181.9 MB / 0.7017 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.6701/8.215, allocations: 290.5 MB / 3.247 GB, free: 162.1 MB / 0.7017 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0002171/8.215, allocations: 341 kB / 3.247 GB, free: 162 MB / 0.7017 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.05983/8.275, allocations: 23.84 MB / 3.271 GB, free: 157.8 MB / 0.7017 GB
Notification: Performance of pre-optimization done (n=2985): time 0.0001382/8.275, allocations: 0 / 3.271 GB, free: 157.8 MB / 0.7017 GB
Notification: Performance of matching and sorting (n=3387): time 2.101/10.38, allocations: 423.7 MB / 3.684 GB, free: 36.37 MB / 0.7017 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0001946/10.38, allocations: 445.3 kB / 3.685 GB, free: 35.9 MB / 0.7017 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.3078/10.68, allocations: 32.13 MB / 3.716 GB, free: 166.2 MB / 0.7017 GB
Notification: Performance of collectPreVariables (initialization): time 0.009828/10.69, allocations: 0.5677 MB / 3.717 GB, free: 166.1 MB / 0.7017 GB
Notification: Performance of collectInitialEqns (initialization): time 0.01381/10.71, allocations: 21.11 MB / 3.737 GB, free: 153.3 MB / 0.7017 GB
Notification: Performance of collectInitialBindings (initialization): time 0.01815/10.73, allocations: 11.83 MB / 3.749 GB, free: 144.2 MB / 0.7017 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.04072/10.77, allocations: 9.896 MB / 3.758 GB, free: 140.5 MB / 0.7017 GB
Notification: Performance of setup shared object (initialization): time 3.865e-05/10.77, allocations: 307.8 kB / 3.759 GB, free: 140.2 MB / 0.7017 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.05771/10.82, allocations: 38.99 MB / 3.797 GB, free: 124.4 MB / 0.7017 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.06417/10.89, allocations: 53.19 MB / 3.849 GB, free: 91.29 MB / 0.7017 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.1242/11.01, allocations: 96.31 MB / 3.943 GB, free: 12.77 MB / 0.7017 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0005204/11.01, allocations: 128 kB / 3.943 GB, free: 12.64 MB / 0.7017 GB
Notification: Performance of matching and sorting (n=5667) (initialization): time 1.521/12.53, allocations: 257.6 MB / 4.194 GB, free: 25.44 MB / 0.7173 GB
Notification: Performance of prepare postOptimizeDAE: time 0.0002963/12.53, allocations: 199.9 kB / 4.195 GB, free: 25.24 MB / 0.7173 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0006542/12.54, allocations: 444 kB / 4.195 GB, free: 24.81 MB / 0.7173 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.4674/13, allocations: 73.73 MB / 4.267 GB, free: 164.9 MB / 0.7329 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.04603/13.05, allocations: 11.18 MB / 4.278 GB, free: 164.9 MB / 0.7329 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.7716/13.82, allocations: 315.3 MB / 4.586 GB, free: 132.4 MB / 0.7329 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.05163/13.87, allocations: 2.511 MB / 4.588 GB, free: 131.7 MB / 0.7329 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.01419/13.89, allocations: 2.8 MB / 4.591 GB, free: 131.4 MB / 0.7329 GB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 2031
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (5523):
 * Single equations (assignments): 5514
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.04279/13.93, allocations: 18.34 MB / 4.609 GB, free: 123.4 MB / 0.7329 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.01721/13.95, allocations: 3.157 MB / 4.612 GB, free: 123.4 MB / 0.7329 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.7509/14.7, allocations: 152.9 MB / 4.761 GB, free: 5.023 MB / 0.7329 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0003071/14.7, allocations: 356 kB / 4.762 GB, free: 4.676 MB / 0.7329 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0003534/14.7, allocations: 58.41 kB / 4.762 GB, free: 4.621 MB / 0.7329 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.0009426/14.7, allocations: 183.3 kB / 4.762 GB, free: 4.441 MB / 0.7329 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 1.141/15.84, allocations: 238.3 MB / 4.995 GB, free: 46.6 MB / 0.7329 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.000315/15.84, allocations: 12 kB / 4.995 GB, free: 46.59 MB / 0.7329 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.03915/15.88, allocations: 7.249 MB / 5.002 GB, free: 39.45 MB / 0.7329 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.3796/16.26, allocations: 39.76 MB / 5.041 GB, free: 147.2 MB / 0.7329 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.009369/16.27, allocations: 1.444 MB / 5.042 GB, free: 147.2 MB / 0.7329 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.2842/16.55, allocations: 159.8 MB / 5.198 GB, free: 91.17 MB / 0.7329 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 9.988e-06/16.55, allocations: 17 kB / 5.198 GB, free: 91.17 MB / 0.7329 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 1.091/17.64, allocations: 200.6 MB / 5.394 GB, free: 118.3 MB / 0.7329 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.02729/17.67, allocations: 10.95 MB / 5.405 GB, free: 114.4 MB / 0.7329 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.01492/17.69, allocations: 0.9154 MB / 5.406 GB, free: 113.8 MB / 0.7329 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.03664/17.72, allocations: 1.581 MB / 5.407 GB, free: 113.3 MB / 0.7329 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.02003/17.74, allocations: 4.566 MB / 5.412 GB, free: 112.7 MB / 0.7329 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.006962/17.75, allocations: 1.383 MB / 5.413 GB, free: 112.4 MB / 0.7329 GB
Notification: Performance of sorting global known variables: time 0.03151/17.78, allocations: 22.38 MB / 5.435 GB, free: 104.2 MB / 0.7329 GB
Notification: Performance of sort global known variables: time 3.31e-07/17.78, allocations: 0.5469 kB / 5.435 GB, free: 104.2 MB / 0.7329 GB
Notification: Performance of remove unused functions: time 0.07706/17.86, allocations: 20.11 MB / 5.454 GB, free: 102.1 MB / 0.7329 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 45
 * Number of states: 180 (pCO2_2000.solution.temperature,pCO2_2000.O2_free.logn,pCO2_2000.H2O.logn,pCO2_2000.relaxed.OxyHm[1].logn,pCO2_2000.relaxed.OxyHm[2].logn,pCO2_2000.relaxed.OxyHm[3].logn,pCO2_2000.relaxed.OxyHm[4].logn,pCO2_2000.relaxed.DeoxyHm[1].logn,pCO2_2000.relaxed.DeoxyHm[2].logn,pCO2_2000.relaxed.DeoxyHm[3].logn,pCO2_2000.relaxed.DeoxyHm[4].logn,pCO2_2000.relaxed.HmAH[1].logn,pCO2_2000.relaxed.HmAH[2].logn,pCO2_2000.relaxed.HmAH[3].logn,pCO2_2000.relaxed.HmAH[4].logn,pCO2_2000.relaxed.HmA[1].logn,pCO2_2000.relaxed.HmA[2].logn,pCO2_2000.relaxed.HmA[3].logn,pCO2_2000.relaxed.HmA[4].logn,pCO2_2000.relaxed.HmNH3[1].logn,pCO2_2000.relaxed.HmNH3[2].logn,pCO2_2000.relaxed.HmNH3[3].logn,pCO2_2000.relaxed.HmNH3[4].logn,pCO2_2000.relaxed.HmNH2[1].logn,pCO2_2000.relaxed.HmNH2[2].logn,pCO2_2000.relaxed.HmNH2[3].logn,pCO2_2000.relaxed.HmNH2[4].logn,pCO2_2000.relaxed.HmNHCOO[1].logn,pCO2_2000.relaxed.HmNHCOO[2].logn,pCO2_2000.relaxed.HmNHCOO[3].logn,pCO2_2000.relaxed.HmNHCOO[4].logn,pCO2_2000.tensed.OxyHm[1].logn,pCO2_2000.tensed.OxyHm[2].logn,pCO2_2000.tensed.OxyHm[3].logn,pCO2_2000.tensed.OxyHm[4].logn,pCO2_2000.tensed.DeoxyHm[1].logn,pCO2_2000.tensed.DeoxyHm[2].logn,pCO2_2000.tensed.DeoxyHm[3].logn,pCO2_2000.tensed.DeoxyHm[4].logn,pCO2_2000.tensed.HmAH[1].logn,pCO2_2000.tensed.HmAH[2].logn,pCO2_2000.tensed.HmAH[3].logn,pCO2_2000.tensed.HmAH[4].logn,pCO2_2000.tensed.HmA[1].logn,pCO2_2000.tensed.HmA[2].logn,pCO2_2000.tensed.HmA[3].logn,pCO2_2000.tensed.HmA[4].logn,pCO2_2000.tensed.HmNH3[1].logn,pCO2_2000.tensed.HmNH3[2].logn,pCO2_2000.tensed.HmNH3[3].logn,pCO2_2000.tensed.HmNH3[4].logn,pCO2_2000.tensed.HmNH2[1].logn,pCO2_2000.tensed.HmNH2[2].logn,pCO2_2000.tensed.HmNH2[3].logn,pCO2_2000.tensed.HmNH2[4].logn,pCO2_2000.tensed.HmNHCOO[1].logn,pCO2_2000.tensed.HmNHCOO[2].logn,pCO2_2000.tensed.HmNHCOO[3].logn,pCO2_2000.tensed.HmNHCOO[4].logn,pCO2_2000.CO2_free.logn,pCO2_5330.solution.temperature,pCO2_5330.O2_free.logn,pCO2_5330.H2O.logn,pCO2_5330.relaxed.OxyHm[1].logn,pCO2_5330.relaxed.OxyHm[2].logn,pCO2_5330.relaxed.OxyHm[3].logn,pCO2_5330.relaxed.OxyHm[4].logn,pCO2_5330.relaxed.DeoxyHm[1].logn,pCO2_5330.relaxed.DeoxyHm[2].logn,pCO2_5330.relaxed.DeoxyHm[3].logn,pCO2_5330.relaxed.DeoxyHm[4].logn,pCO2_5330.relaxed.HmAH[1].logn,pCO2_5330.relaxed.HmAH[2].logn,pCO2_5330.relaxed.HmAH[3].logn,pCO2_5330.relaxed.HmAH[4].logn,pCO2_5330.relaxed.HmA[1].logn,pCO2_5330.relaxed.HmA[2].logn,pCO2_5330.relaxed.HmA[3].logn,pCO2_5330.relaxed.HmA[4].logn,pCO2_5330.relaxed.HmNH3[1].logn,pCO2_5330.relaxed.HmNH3[2].logn,pCO2_5330.relaxed.HmNH3[3].logn,pCO2_5330.relaxed.HmNH3[4].logn,pCO2_5330.relaxed.HmNH2[1].logn,pCO2_5330.relaxed.HmNH2[2].logn,pCO2_5330.relaxed.HmNH2[3].logn,pCO2_5330.relaxed.HmNH2[4].logn,pCO2_5330.relaxed.HmNHCOO[1].logn,pCO2_5330.relaxed.HmNHCOO[2].logn,pCO2_5330.relaxed.HmNHCOO[3].logn,pCO2_5330.relaxed.HmNHCOO[4].logn,pCO2_5330.tensed.OxyHm[1].logn,pCO2_5330.tensed.OxyHm[2].logn,pCO2_5330.tensed.OxyHm[3].logn,pCO2_5330.tensed.OxyHm[4].logn,pCO2_5330.tensed.DeoxyHm[1].logn,pCO2_5330.tensed.DeoxyHm[2].logn,pCO2_5330.tensed.DeoxyHm[3].logn,pCO2_5330.tensed.DeoxyHm[4].logn,pCO2_5330.tensed.HmAH[1].logn,pCO2_5330.tensed.HmAH[2].logn,pCO2_5330.tensed.HmAH[3].logn,pCO2_5330.tensed.HmAH[4].logn,pCO2_5330.tensed.HmA[1].logn,pCO2_5330.tensed.HmA[2].logn,pCO2_5330.tensed.HmA[3].logn,pCO2_5330.tensed.HmA[4].logn,pCO2_5330.tensed.HmNH3[1].logn,pCO2_5330.tensed.HmNH3[2].logn,pCO2_5330.tensed.HmNH3[3].logn,pCO2_5330.tensed.HmNH3[4].logn,pCO2_5330.tensed.HmNH2[1].logn,pCO2_5330.tensed.HmNH2[2].logn,pCO2_5330.tensed.HmNH2[3].logn,pCO2_5330.tensed.HmNH2[4].logn,pCO2_5330.tensed.HmNHCOO[1].logn,pCO2_5330.tensed.HmNHCOO[2].logn,pCO2_5330.tensed.HmNHCOO[3].logn,pCO2_5330.tensed.HmNHCOO[4].logn,pCO2_5330.CO2_free.logn,pCO2_9330.solution.temperature,pCO2_9330.O2_free.logn,pCO2_9330.H2O.logn,pCO2_9330.relaxed.OxyHm[1].logn,pCO2_9330.relaxed.OxyHm[2].logn,pCO2_9330.relaxed.OxyHm[3].logn,pCO2_9330.relaxed.OxyHm[4].logn,pCO2_9330.relaxed.DeoxyHm[1].logn,pCO2_9330.relaxed.DeoxyHm[2].logn,pCO2_9330.relaxed.DeoxyHm[3].logn,pCO2_9330.relaxed.DeoxyHm[4].logn,pCO2_9330.relaxed.HmAH[1].logn,pCO2_9330.relaxed.HmAH[2].logn,pCO2_9330.relaxed.HmAH[3].logn,pCO2_9330.relaxed.HmAH[4].logn,pCO2_9330.relaxed.HmA[1].logn,pCO2_9330.relaxed.HmA[2].logn,pCO2_9330.relaxed.HmA[3].logn,pCO2_9330.relaxed.HmA[4].logn,pCO2_9330.relaxed.HmNH3[1].logn,pCO2_9330.relaxed.HmNH3[2].logn,pCO2_9330.relaxed.HmNH3[3].logn,pCO2_9330.relaxed.HmNH3[4].logn,pCO2_9330.relaxed.HmNH2[1].logn,pCO2_9330.relaxed.HmNH2[2].logn,pCO2_9330.relaxed.HmNH2[3].logn,pCO2_9330.relaxed.HmNH2[4].logn,pCO2_9330.relaxed.HmNHCOO[1].logn,pCO2_9330.relaxed.HmNHCOO[2].logn,pCO2_9330.relaxed.HmNHCOO[3].logn,pCO2_9330.relaxed.HmNHCOO[4].logn,pCO2_9330.tensed.OxyHm[1].logn,pCO2_9330.tensed.OxyHm[2].logn,pCO2_9330.tensed.OxyHm[3].logn,pCO2_9330.tensed.OxyHm[4].logn,pCO2_9330.tensed.DeoxyHm[1].logn,pCO2_9330.tensed.DeoxyHm[2].logn,pCO2_9330.tensed.DeoxyHm[3].logn,pCO2_9330.tensed.DeoxyHm[4].logn,pCO2_9330.tensed.HmAH[1].logn,pCO2_9330.tensed.HmAH[2].logn,pCO2_9330.tensed.HmAH[3].logn,pCO2_9330.tensed.HmAH[4].logn,pCO2_9330.tensed.HmA[1].logn,pCO2_9330.tensed.HmA[2].logn,pCO2_9330.tensed.HmA[3].logn,pCO2_9330.tensed.HmA[4].logn,pCO2_9330.tensed.HmNH3[1].logn,pCO2_9330.tensed.HmNH3[2].logn,pCO2_9330.tensed.HmNH3[3].logn,pCO2_9330.tensed.HmNH3[4].logn,pCO2_9330.tensed.HmNH2[1].logn,pCO2_9330.tensed.HmNH2[2].logn,pCO2_9330.tensed.HmNH2[3].logn,pCO2_9330.tensed.HmNH2[4].logn,pCO2_9330.tensed.HmNHCOO[1].logn,pCO2_9330.tensed.HmNHCOO[2].logn,pCO2_9330.tensed.HmNHCOO[3].logn,pCO2_9330.tensed.HmNHCOO[4].logn,pCO2_9330.CO2_free.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (3702):
 * Single equations (assignments): 3693
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.02609/17.88, allocations: 10.53 MB / 5.465 GB, free: 100.8 MB / 0.7329 GB
Notification: Performance of simCode: created initialization part: time 1.113/19, allocations: 335.3 MB / 5.792 GB, free: 66.01 MB / 0.7485 GB
Notification: Performance of simCode: created event and clocks part: time 1.266e-05/19, allocations: 0 / 5.792 GB, free: 66.01 MB / 0.7485 GB
Notification: Performance of simCode: created simulation system equations: time 0.118/19.12, allocations: 58.32 MB / 5.849 GB, free: 16.92 MB / 0.7485 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.05659/19.17, allocations: 8.001 MB / 5.857 GB, free: 11.39 MB / 0.7485 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.5443/19.72, allocations: 122.4 MB / 5.977 GB, free: 141.3 MB / 0.7485 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.04444/19.76, allocations: 30.6 MB / 6.006 GB, free: 128.3 MB / 0.7485 GB
Notification: Performance of simCode: alias equations: time 0.04846/19.81, allocations: 15.55 MB / 6.022 GB, free: 117.6 MB / 0.7485 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.01928/19.83, allocations: 4.316 MB / 6.026 GB, free: 114 MB / 0.7485 GB
Notification: Performance of SimCode: time 1.002e-06/19.83, allocations: 0 / 6.026 GB, free: 114 MB / 0.7485 GB
Notification: Performance of Templates: time 2.588/22.42, allocations: 0.9873 GB / 7.013 GB, free: 230.5 MB / 0.8267 GB
make -j1 -f Chemical_Chemical.Examples.Hemoglobin.Joels57.makefile
(rm -f Chemical_Chemical.Examples.Hemoglobin.Joels57.pipe ; mkfifo Chemical_Chemical.Examples.Hemoglobin.Joels57.pipe ; head -c 1048576 < Chemical_Chemical.Examples.Hemoglobin.Joels57.pipe >> ../files/Chemical_Chemical.Examples.Hemoglobin.Joels57.sim & ./Chemical_Chemical.Examples.Hemoglobin.Joels57  -abortSlowSimulation -alarm=480 -lv LOG_STATS > Chemical_Chemical.Examples.Hemoglobin.Joels57.pipe 2>&1)