Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries/ --ompython_omhome=/usr BioChem_BioChem.Examples.centralMetabolism.extra_cellular.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo", uses=false)
Using package BioChem with version 1.1.2 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo)
Using package Modelica with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo)
Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo)
Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo)
Running command: translateModel(BioChem.Examples.centralMetabolism.extra_cellular,tolerance=1e-05,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="BioChem_BioChem.Examples.centralMetabolism.extra_cellular")
translateModel(BioChem.Examples.centralMetabolism.extra_cellular,tolerance=1e-05,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="BioChem_BioChem.Examples.centralMetabolism.extra_cellular")
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.001236/0.001236, allocations: 103.4 kB / 15.33 MB, free: 0.5078 MB / 14.72 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.001331/0.001331, allocations: 199.4 kB / 16.26 MB, free: 6.617 MB / 14.72 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo): time 1.354/1.354, allocations: 222.9 MB / 239.9 MB, free: 4.543 MB / 190.1 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo): time 0.1738/0.1738, allocations: 12.27 MB / 302.3 MB, free: 1.324 MB / 238.1 MB
Warning: Ignoring unknown experiment annotation option: Algorithm = "dassl"
Notification: Performance of FrontEnd - loaded program: time 0.00111/0.00111, allocations: 59.91 kB / 365.3 MB, free: 10.14 MB / 302.1 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.1093/0.1105, allocations: 52.08 MB / 417.3 MB, free: 5.945 MB / 350.1 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/Examples/centralMetabolism.mo:563:5-563:131:writable] Error: The model can't be instantiated due to top-level outer element ‘cytosol_V‘, it may only be used as part of a simulation model.
Notification: Performance of FrontEnd: time 0.2353/0.3459, allocations: 16.8 MB / 434.1 MB, free: 32.51 MB / 350.1 MB