[1] Matej?k M, Kulh?nek T, Matouaek S. Adair-Based Hemoglobin...". Defaulting to 7-bit ASCII with unknown characters replaced by '?'. To change encoding when loading a file: loadFile(encoding="ISO-XXXX-YY"). To change it in a package: add a file package.encoding at the top-level. Note: The Modelica Language Specification only allows files encoded in UTF-8. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Chemical.mo:1632:61-1632:133:writable] Warning: The file was not encoded in UTF-8: "
Before silumation in "Dymola 2014 FD01" please set e...". Defaulting to 7-bit ASCII with unknown characters replaced by '?'. To change encoding when loading a file: loadFile(encoding="ISO-XXXX-YY"). To change it in a package: add a file package.encoding at the top-level. Note: The Modelica Language Specification only allows files encoded in UTF-8. Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/package.mo): time 0.07366/0.07366, allocations: 15.39 MB / 285.8 MB, free: 5.887 MB / 238.1 MB Notification: Modelica requested package Complex of version 3.2.3. Complex 4.0.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Modelica requested package ModelicaServices of version 3.2.3. ModelicaServices 4.0.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Physiolibrary requested package Modelica of version 3.2.1. Modelica 3.2.3 is used instead which states that it is fully compatible without conversion script needed. Notification: Performance of FrontEnd - loaded program: time 0.0005609/0.000561, allocations: 12 kB / 347.7 MB, free: 18.2 MB / 254.1 MB Notification: Performance of FrontEnd - Absyn->SCode: time 0.08898/0.08955, allocations: 51.41 MB / 399.1 MB, free: 14.68 MB / 302.1 MB Notification: Performance of NFInst.instantiate(Physiolibrary.Thermal.Examples.MuscleHeat): time 0.002405/0.09202, allocations: 1.778 MB / 400.8 MB, free: 12.89 MB / 302.1 MB Notification: Performance of NFInst.instExpressions: time 0.003018/0.09507, allocations: 1.837 MB / 402.7 MB, free: 11.04 MB / 302.1 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.0001603/0.09526, allocations: 0 / 402.7 MB, free: 11.04 MB / 302.1 MB Notification: Performance of NFTyping.typeComponents: time 4.88e-05/0.09533, allocations: 23.84 kB / 402.7 MB, free: 11.02 MB / 302.1 MB Notification: Performance of NFTyping.typeBindings: time 0.0007842/0.09612, allocations: 187.4 kB / 402.9 MB, free: 10.83 MB / 302.1 MB Notification: Performance of NFTyping.typeClassSections: time 0.0006288/0.09676, allocations: 219.4 kB / 403.1 MB, free: 10.62 MB / 302.1 MB Notification: Performance of NFFlatten.flatten: time 0.0002494/0.09702, allocations: 111.7 kB / 403.2 MB, free: 10.51 MB / 302.1 MB Notification: Performance of NFFlatten.resolveConnections: time 0.0001055/0.09713, allocations: 33.09 kB / 403.2 MB, free: 10.48 MB / 302.1 MB Notification: Performance of NFEvalConstants.evaluate: time 6.848e-05/0.09721, allocations: 35.86 kB / 403.3 MB, free: 10.44 MB / 302.1 MB Notification: Performance of NFSimplifyModel.simplify: time 8.734e-05/0.0973, allocations: 39.8 kB / 403.3 MB, free: 10.4 MB / 302.1 MB Notification: Performance of NFPackage.collectConstants: time 1.443e-05/0.09732, allocations: 4 kB / 403.3 MB, free: 10.4 MB / 302.1 MB Notification: Performance of NFFlatten.collectFunctions: time 1.805e-05/0.09735, allocations: 4 kB / 403.3 MB, free: 10.39 MB / 302.1 MB Notification: Performance of NFScalarize.scalarize: time 2.469e-05/0.09738, allocations: 15.92 kB / 403.3 MB, free: 10.38 MB / 302.1 MB Notification: Performance of NFVerifyModel.verify: time 4.079e-05/0.09742, allocations: 49.64 kB / 403.4 MB, free: 10.32 MB / 302.1 MB Notification: Performance of NFConvertDAE.convert: time 9.91e-05/0.09753, allocations: 76.06 kB / 403.5 MB, free: 10.25 MB / 302.1 MB Notification: Performance of FrontEnd - DAE generated: time 3.116e-06/0.09754, allocations: 0 / 403.5 MB, free: 10.25 MB / 302.1 MB Notification: Performance of FrontEnd: time 2.264e-06/0.09755, allocations: 4 kB / 403.5 MB, free: 10.25 MB / 302.1 MB Notification: Performance of Transformations before backend: time 6.642e-06/0.09756, allocations: 7.938 kB / 403.5 MB, free: 10.24 MB / 302.1 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 17 * Number of variables: 17 Notification: Performance of Generate backend data structure: time 0.0005431/0.09811, allocations: 406.8 kB / 403.9 MB, free: 9.793 MB / 302.1 MB Notification: Performance of prepare preOptimizeDAE: time 3.894e-05/0.09816, allocations: 8.031 kB / 403.9 MB, free: 9.785 MB / 302.1 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 5.126e-05/0.09821, allocations: 15.81 kB / 403.9 MB, free: 9.77 MB / 302.1 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.0002645/0.09849, allocations: 223.3 kB / 404.1 MB, free: 9.512 MB / 302.1 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 1.578e-05/0.09851, allocations: 8 kB / 404.1 MB, free: 9.504 MB / 302.1 MB Notification: Performance of preOpt expandDerOperator (simulation): time 3.088e-05/0.09855, allocations: 4 kB / 404.1 MB, free: 9.5 MB / 302.1 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.000152/0.09871, allocations: 84.8 kB / 404.2 MB, free: 9.414 MB / 302.1 MB Notification: Performance of preOpt findStateOrder (simulation): time 1.409e-05/0.09873, allocations: 3.906 kB / 404.2 MB, free: 9.41 MB / 302.1 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 1.093e-05/0.09875, allocations: 0 / 404.2 MB, free: 9.41 MB / 302.1 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 8.196e-06/0.09876, allocations: 7.984 kB / 404.2 MB, free: 9.402 MB / 302.1 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 8.431e-05/0.09885, allocations: 39.92 kB / 404.3 MB, free: 9.363 MB / 302.1 MB Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts. Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.0007038/0.09956, allocations: 0.4915 MB / 404.7 MB, free: 8.797 MB / 302.1 MB Notification: Performance of preOpt comSubExp (simulation): time 0.0001121/0.09968, allocations: 66.52 kB / 404.8 MB, free: 8.723 MB / 302.1 MB Notification: Performance of preOpt evalFunc (simulation): time 1.165e-05/0.0997, allocations: 0 / 404.8 MB, free: 8.723 MB / 302.1 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.209e-05/0.09973, allocations: 34.56 kB / 404.8 MB, free: 8.68 MB / 302.1 MB Notification: Performance of pre-optimization done (n=5): time 1.182e-06/0.09974, allocations: 0 / 404.8 MB, free: 8.68 MB / 302.1 MB Notification: Performance of matching and sorting (n=5): time 0.0002057/0.09997, allocations: 93.72 kB / 404.9 MB, free: 8.582 MB / 302.1 MB Notification: Performance of inlineWhenForInitialization (initialization): time 3.009e-05/0.1, allocations: 55.34 kB / 405 MB, free: 8.516 MB / 302.1 MB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0001434/0.1002, allocations: 170.3 kB / 405.2 MB, free: 8.34 MB / 302.1 MB Notification: Performance of collectPreVariables (initialization): time 1.382e-05/0.1002, allocations: 25.7 kB / 405.2 MB, free: 8.309 MB / 302.1 MB Notification: Performance of collectInitialEqns (initialization): time 6.521e-05/0.1003, allocations: 108 kB / 405.3 MB, free: 8.199 MB / 302.1 MB Notification: Performance of collectInitialBindings (initialization): time 2.169e-05/0.1003, allocations: 19.75 kB / 405.3 MB, free: 8.18 MB / 302.1 MB Notification: Performance of simplifyInitialFunctions (initialization): time 3.978e-06/0.1003, allocations: 0 / 405.3 MB, free: 8.18 MB / 302.1 MB Notification: Performance of setup shared object (initialization): time 0.0001144/0.1004, allocations: 322.8 kB / 405.6 MB, free: 7.855 MB / 302.1 MB Notification: Performance of preBalanceInitialSystem (initialization): time 3.187e-05/0.1005, allocations: 19.97 kB / 405.6 MB, free: 7.836 MB / 302.1 MB Notification: Performance of partitionIndependentBlocks (initialization): time 3.619e-05/0.1005, allocations: 29.72 kB / 405.7 MB, free: 7.801 MB / 302.1 MB Notification: Performance of analyzeInitialSystem (initialization): time 4.116e-05/0.1005, allocations: 16 kB / 405.7 MB, free: 7.785 MB / 302.1 MB Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.713e-06/0.1005, allocations: 0 / 405.7 MB, free: 7.785 MB / 302.1 MB Notification: Performance of matching and sorting (n=8) (initialization): time 0.0001218/0.1007, allocations: 89.48 kB / 405.8 MB, free: 7.691 MB / 302.1 MB Notification: Performance of prepare postOptimizeDAE: time 1.206e-05/0.1007, allocations: 4 kB / 405.8 MB, free: 7.688 MB / 302.1 MB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 6.502e-06/0.1007, allocations: 7.984 kB / 405.8 MB, free: 7.68 MB / 302.1 MB Notification: Performance of postOpt tearingSystem (initialization): time 1.149e-05/0.1007, allocations: 0 / 405.8 MB, free: 7.68 MB / 302.1 MB Notification: Performance of postOpt solveSimpleEquations (initialization): time 8.612e-05/0.1008, allocations: 16.03 kB / 405.8 MB, free: 7.664 MB / 302.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 7.124e-06/0.1008, allocations: 0 / 405.8 MB, free: 7.664 MB / 302.1 MB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 5.52e-05/0.1009, allocations: 15.72 kB / 405.8 MB, free: 7.648 MB / 302.1 MB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 7.203e-06/0.1009, allocations: 4 kB / 405.8 MB, free: 7.645 MB / 302.1 MB Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 2 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (8): * Single equations (assignments): 8 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (linear and non-linear blocks): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of prepare postOptimizeDAE: time 7.614e-05/0.101, allocations: 117.8 kB / 405.9 MB, free: 7.52 MB / 302.1 MB Notification: Performance of postOpt lateInlineFunction (simulation): time 3.049e-05/0.101, allocations: 11.86 kB / 405.9 MB, free: 7.508 MB / 302.1 MB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 4.224e-05/0.1011, allocations: 16.98 kB / 406 MB, free: 7.488 MB / 302.1 MB Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.934e-06/0.1011, allocations: 0 / 406 MB, free: 7.488 MB / 302.1 MB Notification: Performance of postOpt constantLinearSystem (simulation): time 5.37e-06/0.1011, allocations: 4 kB / 406 MB, free: 7.484 MB / 302.1 MB Notification: Performance of postOpt simplifysemiLinear (simulation): time 3.196e-06/0.1011, allocations: 4 kB / 406 MB, free: 7.48 MB / 302.1 MB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.0001974/0.1013, allocations: 201.5 kB / 406.2 MB, free: 7.234 MB / 302.1 MB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 1.964e-06/0.1013, allocations: 0 / 406.2 MB, free: 7.234 MB / 302.1 MB Notification: Performance of postOpt solveSimpleEquations (simulation): time 7.142e-05/0.1014, allocations: 11.98 kB / 406.2 MB, free: 7.223 MB / 302.1 MB Notification: Performance of postOpt tearingSystem (simulation): time 2.544e-06/0.1014, allocations: 0 / 406.2 MB, free: 7.223 MB / 302.1 MB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 9.308e-06/0.1014, allocations: 3.953 kB / 406.2 MB, free: 7.219 MB / 302.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 1.563e-06/0.1014, allocations: 0 / 406.2 MB, free: 7.219 MB / 302.1 MB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.263e-06/0.1014, allocations: 4 kB / 406.2 MB, free: 7.215 MB / 302.1 MB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.0002004/0.1016, allocations: 187.4 kB / 406.4 MB, free: 7.016 MB / 302.1 MB Notification: Performance of postOpt removeConstants (simulation): time 5.369e-05/0.1017, allocations: 92.94 kB / 406.5 MB, free: 6.906 MB / 302.1 MB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 2.062e-05/0.1017, allocations: 320 / 406.5 MB, free: 6.906 MB / 302.1 MB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 8.931e-05/0.1018, allocations: 11.95 kB / 406.5 MB, free: 6.895 MB / 302.1 MB Notification: Performance of postOpt findZeroCrossings (simulation): time 1.734e-05/0.1018, allocations: 4 kB / 406.5 MB, free: 6.891 MB / 302.1 MB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 3.717e-06/0.1018, allocations: 0 / 406.5 MB, free: 6.891 MB / 302.1 MB Notification: Performance of sorting global known variables: time 8.788e-05/0.1019, allocations: 128.3 kB / 406.6 MB, free: 6.766 MB / 302.1 MB Notification: Performance of sort global known variables: time 9.1e-08/0.1019, allocations: 0 / 406.6 MB, free: 6.766 MB / 302.1 MB Notification: Performance of remove unused functions: time 0.0002374/0.1022, allocations: 24 kB / 406.6 MB, free: 6.742 MB / 302.1 MB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 1 * Number of states: 1 (muscle.state) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (5): * Single equations (assignments): 5 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (linear and non-linear blocks): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of Backend phase and start with SimCode phase: time 8.807e-05/0.1023, allocations: 99.23 kB / 406.7 MB, free: 6.637 MB / 302.1 MB Notification: Performance of simCode: created initialization part: time 0.0001091/0.1024, allocations: 39.94 kB / 406.8 MB, free: 6.598 MB / 302.1 MB Notification: Performance of simCode: created event and clocks part: time 2.335e-06/0.1024, allocations: 0 / 406.8 MB, free: 6.598 MB / 302.1 MB Notification: Performance of simCode: created simulation system equations: time 2.858e-05/0.1024, allocations: 19.98 kB / 406.8 MB, free: 6.578 MB / 302.1 MB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0003154/0.1028, allocations: 23.98 kB / 406.8 MB, free: 6.555 MB / 302.1 MB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.0004317/0.1032, allocations: 307.5 kB / 407.1 MB, free: 6.23 MB / 302.1 MB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0002358/0.1034, allocations: 0.7121 MB / 407.8 MB, free: 5.492 MB / 302.1 MB Notification: Performance of simCode: alias equations: time 5.316e-05/0.1035, allocations: 16.86 kB / 407.8 MB, free: 5.473 MB / 302.1 MB Notification: Performance of simCode: all other stuff during SimCode phase: time 2.86e-05/0.1035, allocations: 11.44 kB / 407.8 MB, free: 5.461 MB / 302.1 MB Notification: Performance of SimCode: time 2.1e-07/0.1036, allocations: 0 / 407.8 MB, free: 5.461 MB / 302.1 MB Notification: Performance of Templates: time 0.003354/0.1069, allocations: 1.053 MB / 408.9 MB, free: 4.406 MB / 302.1 MB make -j1 -f Physiolibrary_Physiolibrary.Thermal.Examples.MuscleHeat.makefile Environment - environmentSimulation: (rm -f Physiolibrary_Physiolibrary.Thermal.Examples.MuscleHeat.pipe ; mkfifo Physiolibrary_Physiolibrary.Thermal.Examples.MuscleHeat.pipe ; head -c 1048576 < Physiolibrary_Physiolibrary.Thermal.Examples.MuscleHeat.pipe >> ../files/Physiolibrary_Physiolibrary.Thermal.Examples.MuscleHeat.sim & ./Physiolibrary_Physiolibrary.Thermal.Examples.MuscleHeat -abortSlowSimulation -alarm=480 -lv LOG_STATS > Physiolibrary_Physiolibrary.Thermal.Examples.MuscleHeat.pipe 2>&1) Environment - environmentSimulation: