[1] Matej?k M, Kulh?nek T, Matouaek S. Adair-Based Hemoglobin...". Defaulting to 7-bit ASCII with unknown characters replaced by '?'. To change encoding when loading a file: loadFile(encoding="ISO-XXXX-YY"). To change it in a package: add a file package.encoding at the top-level. Note: The Modelica Language Specification only allows files encoded in UTF-8. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Chemical.mo:1632:61-1632:133:writable] Warning: The file was not encoded in UTF-8: "
Before silumation in "Dymola 2014 FD01" please set e...". Defaulting to 7-bit ASCII with unknown characters replaced by '?'. To change encoding when loading a file: loadFile(encoding="ISO-XXXX-YY"). To change it in a package: add a file package.encoding at the top-level. Note: The Modelica Language Specification only allows files encoded in UTF-8. Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/package.mo): time 0.07744/0.07744, allocations: 15.4 MB / 285.8 MB, free: 5.902 MB / 238.1 MB Notification: Modelica requested package Complex of version 3.2.3. Complex 4.0.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Modelica requested package ModelicaServices of version 3.2.3. ModelicaServices 4.0.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Physiolibrary requested package Modelica of version 3.2.1. Modelica 3.2.3 is used instead which states that it is fully compatible without conversion script needed. Notification: Performance of FrontEnd - loaded program: time 0.0005304/0.0005305, allocations: 20 kB / 347.7 MB, free: 18.22 MB / 254.1 MB Notification: Performance of FrontEnd - Absyn->SCode: time 0.08238/0.08292, allocations: 51.4 MB / 399.1 MB, free: 14.7 MB / 302.1 MB Notification: Performance of NFInst.instantiate(Physiolibrary.Population.Examples.PredatorPrey): time 0.002327/0.08529, allocations: 1.996 MB / 401.1 MB, free: 12.69 MB / 302.1 MB Notification: Performance of NFInst.instExpressions: time 0.003448/0.08876, allocations: 2.62 MB / 403.7 MB, free: 10.06 MB / 302.1 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.0001281/0.08891, allocations: 7.938 kB / 403.7 MB, free: 10.05 MB / 302.1 MB Notification: Performance of NFTyping.typeComponents: time 4.675e-05/0.08897, allocations: 19.8 kB / 403.7 MB, free: 10.03 MB / 302.1 MB Notification: Performance of NFTyping.typeBindings: time 0.0008233/0.0898, allocations: 295 kB / 404 MB, free: 9.742 MB / 302.1 MB Notification: Performance of NFTyping.typeClassSections: time 0.0007149/0.09052, allocations: 331.2 kB / 404.3 MB, free: 9.418 MB / 302.1 MB Notification: Performance of NFFlatten.flatten: time 0.0002436/0.09078, allocations: 175.6 kB / 404.5 MB, free: 9.246 MB / 302.1 MB Notification: Performance of NFFlatten.resolveConnections: time 0.0001635/0.09095, allocations: 64.61 kB / 404.5 MB, free: 9.18 MB / 302.1 MB Notification: Performance of NFEvalConstants.evaluate: time 7.802e-05/0.09103, allocations: 59.73 kB / 404.6 MB, free: 9.121 MB / 302.1 MB Notification: Performance of NFSimplifyModel.simplify: time 0.0001241/0.09117, allocations: 71.62 kB / 404.7 MB, free: 9.051 MB / 302.1 MB Notification: Performance of NFPackage.collectConstants: time 1.995e-05/0.09119, allocations: 8 kB / 404.7 MB, free: 9.043 MB / 302.1 MB Notification: Performance of NFFlatten.collectFunctions: time 2.438e-05/0.09122, allocations: 4 kB / 404.7 MB, free: 9.039 MB / 302.1 MB Notification: Performance of NFScalarize.scalarize: time 3.08e-05/0.09126, allocations: 27.86 kB / 404.7 MB, free: 9.012 MB / 302.1 MB Notification: Performance of NFVerifyModel.verify: time 5.327e-05/0.09132, allocations: 61.58 kB / 404.8 MB, free: 8.945 MB / 302.1 MB Notification: Performance of NFConvertDAE.convert: time 0.0001487/0.09147, allocations: 131.9 kB / 404.9 MB, free: 8.816 MB / 302.1 MB Notification: Performance of FrontEnd - DAE generated: time 3.146e-06/0.09149, allocations: 8 kB / 404.9 MB, free: 8.809 MB / 302.1 MB Notification: Performance of FrontEnd: time 1.452e-06/0.09149, allocations: 0 / 404.9 MB, free: 8.809 MB / 302.1 MB Notification: Performance of Transformations before backend: time 9.328e-06/0.09151, allocations: 0 / 404.9 MB, free: 8.809 MB / 302.1 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 34 * Number of variables: 34 Notification: Performance of Generate backend data structure: time 0.0005867/0.0921, allocations: 470.7 kB / 405.4 MB, free: 8.301 MB / 302.1 MB Notification: Performance of prepare preOptimizeDAE: time 4.035e-05/0.09215, allocations: 8.031 kB / 405.4 MB, free: 8.293 MB / 302.1 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 4.983e-05/0.09221, allocations: 27.67 kB / 405.4 MB, free: 8.266 MB / 302.1 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.0003397/0.09255, allocations: 250.2 kB / 405.7 MB, free: 7.98 MB / 302.1 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 3.027e-05/0.09259, allocations: 16.28 kB / 405.7 MB, free: 7.965 MB / 302.1 MB Notification: Performance of preOpt expandDerOperator (simulation): time 3.754e-05/0.09264, allocations: 20 kB / 405.7 MB, free: 7.945 MB / 302.1 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.0002312/0.09287, allocations: 115.9 kB / 405.8 MB, free: 7.828 MB / 302.1 MB Notification: Performance of preOpt findStateOrder (simulation): time 1.538e-05/0.0929, allocations: 3.938 kB / 405.8 MB, free: 7.824 MB / 302.1 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 1.883e-05/0.09292, allocations: 8 kB / 405.8 MB, free: 7.816 MB / 302.1 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 9.538e-06/0.09294, allocations: 7.984 kB / 405.8 MB, free: 7.809 MB / 302.1 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0001448/0.09309, allocations: 76.19 kB / 405.9 MB, free: 7.734 MB / 302.1 MB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.0008805/0.09398, allocations: 0.5158 MB / 406.4 MB, free: 7.168 MB / 302.1 MB Notification: Performance of preOpt comSubExp (simulation): time 0.0002242/0.09421, allocations: 118.6 kB / 406.5 MB, free: 7.043 MB / 302.1 MB Notification: Performance of preOpt evalFunc (simulation): time 1.302e-05/0.09424, allocations: 0 / 406.5 MB, free: 7.043 MB / 302.1 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 3.227e-05/0.09428, allocations: 46.56 kB / 406.6 MB, free: 6.988 MB / 302.1 MB Notification: Performance of pre-optimization done (n=12): time 1.362e-06/0.09428, allocations: 0 / 406.6 MB, free: 6.988 MB / 302.1 MB Notification: Performance of matching and sorting (n=12): time 0.0003104/0.0946, allocations: 137.6 kB / 406.7 MB, free: 6.848 MB / 302.1 MB Notification: Performance of inlineWhenForInitialization (initialization): time 4.211e-05/0.09465, allocations: 55.34 kB / 406.8 MB, free: 6.781 MB / 302.1 MB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0002071/0.09486, allocations: 208.1 kB / 407 MB, free: 6.566 MB / 302.1 MB Notification: Performance of collectPreVariables (initialization): time 1.935e-05/0.09489, allocations: 29.7 kB / 407 MB, free: 6.531 MB / 302.1 MB Notification: Performance of collectInitialEqns (initialization): time 0.0001191/0.09502, allocations: 148.2 kB / 407.1 MB, free: 6.383 MB / 302.1 MB Notification: Performance of collectInitialBindings (initialization): time 3.469e-05/0.09506, allocations: 39.45 kB / 407.2 MB, free: 6.344 MB / 302.1 MB Notification: Performance of simplifyInitialFunctions (initialization): time 5.781e-06/0.09507, allocations: 4 kB / 407.2 MB, free: 6.34 MB / 302.1 MB Notification: Performance of setup shared object (initialization): time 0.0001471/0.09523, allocations: 334.8 kB / 407.5 MB, free: 6.004 MB / 302.1 MB Notification: Performance of preBalanceInitialSystem (initialization): time 7.042e-05/0.09531, allocations: 40.3 kB / 407.5 MB, free: 5.965 MB / 302.1 MB Notification: Performance of partitionIndependentBlocks (initialization): time 8.222e-05/0.0954, allocations: 59.31 kB / 407.6 MB, free: 5.898 MB / 302.1 MB Notification: Performance of analyzeInitialSystem (initialization): time 7.899e-05/0.09548, allocations: 44 kB / 407.6 MB, free: 5.855 MB / 302.1 MB Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.763e-06/0.09549, allocations: 0 / 407.6 MB, free: 5.855 MB / 302.1 MB Notification: Performance of matching and sorting (n=22) (initialization): time 0.0002306/0.09573, allocations: 173.3 kB / 407.8 MB, free: 5.68 MB / 302.1 MB Notification: Performance of prepare postOptimizeDAE: time 1.533e-05/0.09575, allocations: 4 kB / 407.8 MB, free: 5.676 MB / 302.1 MB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 5.02e-06/0.09576, allocations: 0 / 407.8 MB, free: 5.676 MB / 302.1 MB Notification: Performance of postOpt tearingSystem (initialization): time 2.009e-05/0.09579, allocations: 7.984 kB / 407.8 MB, free: 5.668 MB / 302.1 MB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0001611/0.09595, allocations: 35.92 kB / 407.9 MB, free: 5.633 MB / 302.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 8.917e-06/0.09597, allocations: 3.984 kB / 407.9 MB, free: 5.629 MB / 302.1 MB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 9.249e-05/0.09607, allocations: 31.67 kB / 407.9 MB, free: 5.598 MB / 302.1 MB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 1.053e-05/0.09609, allocations: 4 kB / 407.9 MB, free: 5.594 MB / 302.1 MB Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 3 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (22): * Single equations (assignments): 22 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (linear and non-linear blocks): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of prepare postOptimizeDAE: time 0.0001288/0.09622, allocations: 137.8 kB / 408 MB, free: 5.449 MB / 302.1 MB Notification: Performance of postOpt lateInlineFunction (simulation): time 3.301e-05/0.09626, allocations: 15.81 kB / 408.1 MB, free: 5.434 MB / 302.1 MB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 4.69e-05/0.09631, allocations: 21.39 kB / 408.1 MB, free: 5.41 MB / 302.1 MB Notification: Performance of postOpt inlineArrayEqn (simulation): time 2.745e-06/0.09632, allocations: 0 / 408.1 MB, free: 5.41 MB / 302.1 MB Notification: Performance of postOpt constantLinearSystem (simulation): time 4.769e-06/0.09633, allocations: 0 / 408.1 MB, free: 5.41 MB / 302.1 MB Notification: Performance of postOpt simplifysemiLinear (simulation): time 3.367e-06/0.09634, allocations: 0 / 408.1 MB, free: 5.41 MB / 302.1 MB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.0002876/0.09663, allocations: 265.4 kB / 408.3 MB, free: 5.102 MB / 302.1 MB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 1.082e-06/0.09664, allocations: 0 / 408.3 MB, free: 5.102 MB / 302.1 MB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0001086/0.09675, allocations: 16 kB / 408.3 MB, free: 5.086 MB / 302.1 MB Notification: Performance of postOpt tearingSystem (simulation): time 2.094e-06/0.09676, allocations: 0 / 408.3 MB, free: 5.086 MB / 302.1 MB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 1.167e-05/0.09678, allocations: 4 kB / 408.4 MB, free: 5.082 MB / 302.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 1.473e-06/0.09679, allocations: 8 kB / 408.4 MB, free: 5.074 MB / 302.1 MB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.725e-06/0.09679, allocations: 3.984 kB / 408.4 MB, free: 5.07 MB / 302.1 MB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.0002769/0.09708, allocations: 251.2 kB / 408.6 MB, free: 4.809 MB / 302.1 MB Notification: Performance of postOpt removeConstants (simulation): time 6.967e-05/0.09716, allocations: 96.91 kB / 408.7 MB, free: 4.695 MB / 302.1 MB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 2.332e-05/0.09719, allocations: 0 / 408.7 MB, free: 4.695 MB / 302.1 MB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 8.917e-05/0.09728, allocations: 15.84 kB / 408.7 MB, free: 4.68 MB / 302.1 MB Notification: Performance of postOpt findZeroCrossings (simulation): time 2.011e-05/0.09731, allocations: 7.984 kB / 408.7 MB, free: 4.672 MB / 302.1 MB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 5.651e-06/0.09732, allocations: 4.062 kB / 408.7 MB, free: 4.668 MB / 302.1 MB Notification: Performance of sorting global known variables: time 0.0001104/0.09744, allocations: 145.9 kB / 408.9 MB, free: 4.527 MB / 302.1 MB Notification: Performance of sort global known variables: time 1.1e-07/0.09744, allocations: 0 / 408.9 MB, free: 4.527 MB / 302.1 MB Notification: Performance of remove unused functions: time 0.0002601/0.09771, allocations: 40 kB / 408.9 MB, free: 4.488 MB / 302.1 MB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 1 * Number of states: 2 (predator.state,prey.state) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (12): * Single equations (assignments): 12 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (linear and non-linear blocks): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of Backend phase and start with SimCode phase: time 0.0001092/0.09782, allocations: 91.25 kB / 409 MB, free: 4.391 MB / 302.1 MB Notification: Performance of simCode: created initialization part: time 0.0001981/0.09803, allocations: 99.86 kB / 409.1 MB, free: 4.293 MB / 302.1 MB Notification: Performance of simCode: created event and clocks part: time 2.485e-06/0.09804, allocations: 0 / 409.1 MB, free: 4.293 MB / 302.1 MB Notification: Performance of simCode: created simulation system equations: time 5.669e-05/0.0981, allocations: 40.47 kB / 409.1 MB, free: 4.254 MB / 302.1 MB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0003559/0.09846, allocations: 52.84 kB / 409.2 MB, free: 4.199 MB / 302.1 MB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.000716/0.09919, allocations: 412.9 kB / 409.6 MB, free: 3.77 MB / 302.1 MB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0003388/0.09954, allocations: 0.7401 MB / 410.3 MB, free: 3.004 MB / 302.1 MB Notification: Performance of simCode: alias equations: time 8.892e-05/0.09964, allocations: 17.55 kB / 410.3 MB, free: 2.988 MB / 302.1 MB Notification: Performance of simCode: all other stuff during SimCode phase: time 4.661e-05/0.09969, allocations: 27.36 kB / 410.4 MB, free: 2.961 MB / 302.1 MB Notification: Performance of SimCode: time 2.6e-07/0.0997, allocations: 0 / 410.4 MB, free: 2.961 MB / 302.1 MB Notification: Performance of Templates: time 0.004191/0.1039, allocations: 1.519 MB / 411.9 MB, free: 1.445 MB / 302.1 MB make -j1 -f Physiolibrary_Physiolibrary.Population.Examples.PredatorPrey.makefile Environment - environmentSimulation: (rm -f Physiolibrary_Physiolibrary.Population.Examples.PredatorPrey.pipe ; mkfifo Physiolibrary_Physiolibrary.Population.Examples.PredatorPrey.pipe ; head -c 1048576 < Physiolibrary_Physiolibrary.Population.Examples.PredatorPrey.pipe >> ../files/Physiolibrary_Physiolibrary.Population.Examples.PredatorPrey.sim & ./Physiolibrary_Physiolibrary.Population.Examples.PredatorPrey -abortSlowSimulation -alarm=480 -lv LOG_STATS > Physiolibrary_Physiolibrary.Population.Examples.PredatorPrey.pipe 2>&1) Environment - environmentSimulation: