Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries/ --ompython_omhome=/usr Chemical_Chemical.Examples.Hemoglobin.HemoglobinCarboxylation.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false)
Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo)
Using package Modelica with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo)
Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo)
Using package Chemical with version 1.4.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo)
Running command: translateModel(Chemical.Examples.Hemoglobin.HemoglobinCarboxylation,tolerance=1e-05,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Chemical_Chemical.Examples.Hemoglobin.HemoglobinCarboxylation")
translateModel(Chemical.Examples.Hemoglobin.HemoglobinCarboxylation,tolerance=1e-05,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Chemical_Chemical.Examples.Hemoglobin.HemoglobinCarboxylation")
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo): time 0.09334/0.09334, allocations: 15.26 MB / 22.74 MB, free: 0.9727 MB / 18.57 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.0009501/0.0009502, allocations: 185 kB / 27.52 MB, free: 6.117 MB / 24.77 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo): time 1.454/1.454, allocations: 221.5 MB / 253.7 MB, free: 10.97 MB / 202.7 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.0008465/0.0008465, allocations: 94.38 kB / 308.8 MB, free: 10.92 MB / 250.7 MB
Warning: Ignoring unknown experiment annotation option: __Dymola_Algorithm = "Dassl"
Notification: Performance of FrontEnd - loaded program: time 1.765e-05/1.768e-05, allocations: 3 kB / 369.6 MB, free: 53.86 MB / 298.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.125/0.1251, allocations: 54.63 MB / 424.2 MB, free: 14.27 MB / 298.7 MB
Notification: Performance of FrontEnd - scodeFlatten: time 0.4639/0.589, allocations: 108.7 MB / 0.5205 GB, free: 12.41 MB / 362.7 MB
Notification: Performance of FrontEnd - mkProgramGraph: time 0.0002317/0.5893, allocations: 70.88 kB / 0.5205 GB, free: 12.4 MB / 362.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:4721:7-4721:66:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System solution.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Solution$solution.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System oxygen_in_air.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Sources.ExternalIdealGasSubstance$oxygen_in_air.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System H2O.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$H2O.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System CO2_gas.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Sources.ExternalIdealGasSubstance$CO2_gas.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System H.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Sources.ExternalMoleFraction$H.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:2321:8-2321:67:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System H.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Sources.ExternalMoleFraction$H.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System O2_free.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$O2_free.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System CO2_free.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$CO2_free.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System tensed.DeoxyHm[4].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$tensed$DeoxyHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System tensed.DeoxyHm[3].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$tensed$DeoxyHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System tensed.DeoxyHm[2].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$tensed$DeoxyHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System tensed.DeoxyHm[1].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$tensed$DeoxyHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System tensed.HmA[4].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$tensed$HmA.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System tensed.HmA[3].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$tensed$HmA.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System tensed.HmA[2].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$tensed$HmA.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System tensed.HmA[1].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$tensed$HmA.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System tensed.HmNH2[4].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$tensed$HmNH2.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System tensed.HmNH2[3].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$tensed$HmNH2.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System tensed.HmNH2[2].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$tensed$HmNH2.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System tensed.HmNH2[1].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$tensed$HmNH2.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System tensed.OxyHm[4].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$tensed$OxyHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System tensed.OxyHm[3].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$tensed$OxyHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System tensed.OxyHm[2].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$tensed$OxyHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System tensed.OxyHm[1].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$tensed$OxyHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System tensed.HmAH[4].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$tensed$HmAH.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System tensed.HmAH[3].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$tensed$HmAH.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System tensed.HmAH[2].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$tensed$HmAH.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System tensed.HmAH[1].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$tensed$HmAH.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System tensed.HmNH3[4].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$tensed$HmNH3.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System tensed.HmNH3[3].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$tensed$HmNH3.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System tensed.HmNH3[2].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$tensed$HmNH3.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System tensed.HmNH3[1].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$tensed$HmNH3.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System tensed.HmNHCOO[4].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$tensed$HmNHCOO.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System tensed.HmNHCOO[3].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$tensed$HmNHCOO.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System tensed.HmNHCOO[2].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$tensed$HmNHCOO.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System tensed.HmNHCOO[1].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$tensed$HmNHCOO.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/Examples.mo:3701:7-3703:30:writable] Warning: connect(solution, solution) connects the same connector instance! The connect equation will be ignored.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/Examples.mo:3704:7-3706:31:writable] Warning: connect(H, H) connects the same connector instance! The connect equation will be ignored.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System relaxed.DeoxyHm[4].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$relaxed$DeoxyHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System relaxed.DeoxyHm[3].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$relaxed$DeoxyHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System relaxed.DeoxyHm[2].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$relaxed$DeoxyHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System relaxed.DeoxyHm[1].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$relaxed$DeoxyHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System relaxed.HmA[4].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$relaxed$HmA.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System relaxed.HmA[3].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$relaxed$HmA.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System relaxed.HmA[2].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$relaxed$HmA.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System relaxed.HmA[1].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$relaxed$HmA.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System relaxed.HmNH2[4].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$relaxed$HmNH2.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System relaxed.HmNH2[3].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$relaxed$HmNH2.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System relaxed.HmNH2[2].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$relaxed$HmNH2.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System relaxed.HmNH2[1].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$relaxed$HmNH2.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System relaxed.OxyHm[4].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$relaxed$OxyHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System relaxed.OxyHm[3].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$relaxed$OxyHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System relaxed.OxyHm[2].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$relaxed$OxyHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System relaxed.OxyHm[1].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$relaxed$OxyHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System relaxed.HmAH[4].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$relaxed$HmAH.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System relaxed.HmAH[3].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$relaxed$HmAH.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System relaxed.HmAH[2].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$relaxed$HmAH.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System relaxed.HmAH[1].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$relaxed$HmAH.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System relaxed.HmNH3[4].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$relaxed$HmNH3.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System relaxed.HmNH3[3].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$relaxed$HmNH3.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System relaxed.HmNH3[2].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$relaxed$HmNH3.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System relaxed.HmNH3[1].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$relaxed$HmNH3.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System relaxed.HmNHCOO[4].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$relaxed$HmNHCOO.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System relaxed.HmNHCOO[3].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$relaxed$HmNHCOO.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System relaxed.HmNHCOO[2].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$relaxed$HmNHCOO.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System relaxed.HmNHCOO[1].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$relaxed$HmNHCOO.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/Examples.mo:3701:7-3703:30:writable] Warning: connect(solution, solution) connects the same connector instance! The connect equation will be ignored.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/Examples.mo:3704:7-3706:31:writable] Warning: connect(H, H) connects the same connector instance! The connect equation will be ignored.
Notification: Performance of FrontEnd - DAE generated: time 1.821/2.41, allocations: 469.9 MB / 0.9794 GB, free: 29.8 MB / 490.7 MB
Notification: Performance of FrontEnd: time 2.144e-06/2.41, allocations: 0 / 0.9794 GB, free: 29.8 MB / 490.7 MB
Notification: Performance of Transformations before backend: time 0.002907/2.413, allocations: 355 kB / 0.9797 GB, free: 29.79 MB / 490.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 3808
 * Number of variables: 3808
Notification: Performance of Generate backend data structure: time 0.06639/2.48, allocations: 18.18 MB / 0.9975 GB, free: 18.28 MB / 490.7 MB
Notification: Performance of prepare preOptimizeDAE: time 5.226e-05/2.48, allocations: 23.89 kB / 0.9975 GB, free: 18.25 MB / 490.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.02968/2.51, allocations: 5.002 MB / 1.002 GB, free: 13.79 MB / 490.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.05209/2.562, allocations: 17.43 MB / 1.019 GB, free: 12.52 MB / 0.4948 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.002971/2.565, allocations: 1.646 MB / 1.021 GB, free: 10.65 MB / 0.4948 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.01153/2.576, allocations: 0.9211 MB / 1.022 GB, free: 9.73 MB / 0.4948 GB
Notification: Performance of preOpt removeEqualFunctionCalls (simulation): time 0.4724/3.049, allocations: 71.22 MB / 1.091 GB, free: 37.61 MB / 0.4948 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.09062/3.139, allocations: 43.3 MB / 1.134 GB, free: 23.81 MB / 0.4948 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.0006796/3.14, allocations: 11.12 kB / 1.134 GB, free: 23.81 MB / 0.4948 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.009204/3.149, allocations: 5.938 kB / 1.134 GB, free: 23.81 MB / 0.4948 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0003243/3.15, allocations: 361.1 kB / 1.134 GB, free: 23.81 MB / 0.4948 GB
Warning: The model contains alias variables with conflicting start and/or nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.6353/3.785, allocations: 172.9 MB / 1.303 GB, free: 61.34 MB / 0.5417 GB
Notification: Performance of preOpt comSubExp (simulation): time 1.51/5.295, allocations: 235.2 MB / 1.533 GB, free: 89.25 MB / 0.5573 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.04225/5.338, allocations: 30.09 MB / 1.562 GB, free: 78.34 MB / 0.5573 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.006102/5.344, allocations: 1.877 MB / 1.564 GB, free: 77.27 MB / 0.5573 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.000399/5.344, allocations: 223.6 kB / 1.564 GB, free: 77.15 MB / 0.5573 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.03857/5.383, allocations: 6.526 MB / 1.57 GB, free: 73.84 MB / 0.5573 GB
Notification: Performance of pre-optimization done (n=1896): time 0.0001694/5.383, allocations: 0 / 1.57 GB, free: 73.84 MB / 0.5573 GB
Notification: Performance of matching and sorting (n=2327): time 4.005/9.388, allocations: 0.7162 GB / 2.287 GB, free: 92.09 MB / 0.5886 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0001886/9.388, allocations: 277.5 kB / 2.287 GB, free: 92.01 MB / 0.5886 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.02272/9.411, allocations: 11.84 MB / 2.299 GB, free: 91.54 MB / 0.5886 GB
Notification: Performance of collectPreVariables (initialization): time 0.009704/9.421, allocations: 29.52 kB / 2.299 GB, free: 91.5 MB / 0.5886 GB
Notification: Performance of collectInitialEqns (initialization): time 0.006691/9.428, allocations: 6.291 MB / 2.305 GB, free: 90.48 MB / 0.5886 GB
Notification: Performance of collectInitialBindings (initialization): time 0.02789/9.456, allocations: 7.668 MB / 2.312 GB, free: 85.45 MB / 0.5886 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.01136/9.467, allocations: 3.438 kB / 2.312 GB, free: 85.45 MB / 0.5886 GB
Notification: Performance of setup shared object (initialization): time 0.001757/9.469, allocations: 1.153 MB / 2.313 GB, free: 85.09 MB / 0.5886 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.1009/9.57, allocations: 51.81 MB / 2.364 GB, free: 85.05 MB / 0.5886 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.07979/9.65, allocations: 54.08 MB / 2.417 GB, free: 66.64 MB / 0.5886 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.1004/9.75, allocations: 58.27 MB / 2.474 GB, free: 33.3 MB / 0.5886 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0002308/9.75, allocations: 15.78 kB / 2.474 GB, free: 33.29 MB / 0.5886 GB
Notification: Performance of matching and sorting (n=2662) (initialization): time 1.041/10.79, allocations: 174.2 MB / 2.644 GB, free: 90.91 MB / 0.5886 GB
Notification: Performance of prepare postOptimizeDAE: time 8.332e-05/10.79, allocations: 24 kB / 2.644 GB, free: 90.89 MB / 0.5886 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0001293/10.79, allocations: 40 kB / 2.644 GB, free: 90.85 MB / 0.5886 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.06514/10.86, allocations: 26.32 MB / 2.669 GB, free: 72.65 MB / 0.5886 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.03491/10.89, allocations: 6.028 MB / 2.675 GB, free: 67.79 MB / 0.5886 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.7199/11.61, allocations: 93.74 MB / 2.767 GB, free: 90.09 MB / 0.5886 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.4409/12.05, allocations: 17.06 MB / 2.784 GB, free: 87.85 MB / 0.5886 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.02115/12.07, allocations: 2.624 MB / 2.786 GB, free: 87.85 MB / 0.5886 GB
Warning: Iteration variables with default zero start attribute in torn nonlinear equation system:
         CO2_free.solution.n:DUMMY_STATE(flow=false min = 0.0 max = 0.0 unit = "mol" )  "Amount of the solution" type: Real
Warning: Iteration variables with default zero start attribute in torn nonlinear equation system:
         CO2_free.solution.I:VARIABLE(flow=false min = 0.0 max = 0.0 unit = "1" )  "Mole fraction based ionic strength of the solution" type: Real
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 189
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (2376):
 * Single equations (assignments): 2370
 * Array equations: 2
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (linear and non-linear blocks): 0
 * Torn equation systems: 4
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems: 2 {(33,82.4%) 10,(1,100.0%) 3}
 * Non-linear torn systems: 2 {1 120,1 3}
Notification: Performance of prepare postOptimizeDAE: time 0.02714/12.1, allocations: 410.5 kB / 2.787 GB, free: 87.74 MB / 0.5886 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.01869/12.12, allocations: 1.528 MB / 2.788 GB, free: 87.67 MB / 0.5886 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 2.421/14.54, allocations: 430.7 MB / 3.209 GB, free: 94.33 MB / 0.6042 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.626/16.17, allocations: 286.8 MB / 3.489 GB, free: 78.04 MB / 0.6042 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0001567/16.17, allocations: 18.69 kB / 3.489 GB, free: 78.04 MB / 0.6042 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.001534/16.17, allocations: 131.3 kB / 3.489 GB, free: 78.04 MB / 0.6042 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 3.301/19.47, allocations: 0.8382 GB / 4.327 GB, free: 33.97 MB / 0.6198 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0003434/19.47, allocations: 67.95 kB / 4.327 GB, free: 33.9 MB / 0.6198 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.03224/19.5, allocations: 5.724 MB / 4.333 GB, free: 28.24 MB / 0.6198 GB
Notification: Performance of postOpt tearingSystem (simulation): time 1.329/20.83, allocations: 201.7 MB / 4.53 GB, free: 34.12 MB / 0.6198 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.01701/20.85, allocations: 1.514 MB / 4.531 GB, free: 32.96 MB / 0.6198 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 2.776/23.62, allocations: 0.6191 GB / 5.15 GB, free: 101.1 MB / 0.6198 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 0.02039/23.64, allocations: 10.5 MB / 5.16 GB, free: 96.54 MB / 0.6198 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 2.385/26.03, allocations: 400.5 MB / 5.552 GB, free: 95.1 MB / 0.6198 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.04434/26.07, allocations: 13.25 MB / 5.564 GB, free: 94.9 MB / 0.6198 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.01802/26.09, allocations: 134.6 kB / 5.565 GB, free: 94.9 MB / 0.6198 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.2091/26.3, allocations: 7.966 MB / 5.572 GB, free: 94.76 MB / 0.6198 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.02351/26.32, allocations: 3.955 MB / 5.576 GB, free: 94.68 MB / 0.6198 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.01534/26.34, allocations: 1.97 MB / 5.578 GB, free: 94.68 MB / 0.6198 GB
Notification: Performance of sorting global known variables: time 0.01987/26.36, allocations: 9.302 MB / 5.587 GB, free: 94.39 MB / 0.6198 GB
Notification: Performance of sort global known variables: time 1.854e-06/26.36, allocations: 6.312 kB / 5.587 GB, free: 94.39 MB / 0.6198 GB
Notification: Performance of remove unused functions: time 0.3172/26.68, allocations: 123.2 MB / 5.708 GB, free: 16.7 MB / 0.6198 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 306
 * Number of states: 60 ($STATESET1.x[60],$STATESET1.x[59],$STATESET1.x[58],$STATESET1.x[57],$STATESET1.x[56],$STATESET1.x[55],$STATESET1.x[54],$STATESET1.x[53],$STATESET1.x[52],$STATESET1.x[51],$STATESET1.x[50],$STATESET1.x[49],$STATESET1.x[48],$STATESET1.x[47],$STATESET1.x[46],$STATESET1.x[45],$STATESET1.x[44],$STATESET1.x[43],$STATESET1.x[42],$STATESET1.x[41],$STATESET1.x[40],$STATESET1.x[39],$STATESET1.x[38],$STATESET1.x[37],$STATESET1.x[36],$STATESET1.x[35],$STATESET1.x[34],$STATESET1.x[33],$STATESET1.x[32],$STATESET1.x[31],$STATESET1.x[30],$STATESET1.x[29],$STATESET1.x[28],$STATESET1.x[27],$STATESET1.x[26],$STATESET1.x[25],$STATESET1.x[24],$STATESET1.x[23],$STATESET1.x[22],$STATESET1.x[21],$STATESET1.x[20],$STATESET1.x[19],$STATESET1.x[18],$STATESET1.x[17],$STATESET1.x[16],$STATESET1.x[15],$STATESET1.x[14],$STATESET1.x[13],$STATESET1.x[12],$STATESET1.x[11],$STATESET1.x[10],$STATESET1.x[9],$STATESET1.x[8],$STATESET1.x[7],$STATESET1.x[6],$STATESET1.x[5],$STATESET1.x[4],$STATESET1.x[3],$STATESET1.x[2],$STATESET1.x[1])
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (2470):
 * Single equations (assignments): 2466
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (linear and non-linear blocks): 0
 * Torn equation systems: 4
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems: 2 {(33,82.4%) 10,(1,100.0%) 3}
 * Non-linear torn systems: 2 {1 120,61 68}
Notification: Performance of Backend phase and start with SimCode phase: time 0.02215/26.7, allocations: 4.001 MB / 5.711 GB, free: 14.24 MB / 0.6198 GB
Notification: Performance of simCode: created initialization part: time 0.7087/27.41, allocations: 124.8 MB / 5.833 GB, free: 117.4 MB / 0.6198 GB
Notification: Performance of simCode: created event and clocks part: time 6.909e-05/27.41, allocations: 7.969 kB / 5.833 GB, free: 117.4 MB / 0.6198 GB
Notification: Performance of simCode: created simulation system equations: time 0.8189/28.23, allocations: 193.5 MB / 6.022 GB, free: 114.6 MB / 0.6198 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.07871/28.31, allocations: 5.491 MB / 6.028 GB, free: 114.2 MB / 0.6198 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.2317/28.54, allocations: 111.5 MB / 6.137 GB, free: 85.12 MB / 0.6198 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.03143/28.57, allocations: 16.51 MB / 6.153 GB, free: 75.23 MB / 0.6198 GB
Notification: Performance of simCode: alias equations: time 0.07116/28.64, allocations: 11.26 MB / 6.164 GB, free: 66.35 MB / 0.6198 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0425/28.68, allocations: 4.328 MB / 6.168 GB, free: 64.22 MB / 0.6198 GB
Notification: Performance of SimCode: time 1.563e-06/28.68, allocations: 0 / 6.168 GB, free: 64.22 MB / 0.6198 GB
Notification: Performance of Templates: time 4.722/33.4, allocations: 0.9239 GB / 7.092 GB, free: 33.12 MB / 0.6511 GB
make -j1 -f Chemical_Chemical.Examples.Hemoglobin.HemoglobinCarboxylation.makefile
(rm -f Chemical_Chemical.Examples.Hemoglobin.HemoglobinCarboxylation.pipe ; mkfifo Chemical_Chemical.Examples.Hemoglobin.HemoglobinCarboxylation.pipe ; head -c 1048576 < Chemical_Chemical.Examples.Hemoglobin.HemoglobinCarboxylation.pipe >> ../files/Chemical_Chemical.Examples.Hemoglobin.HemoglobinCarboxylation.sim & ./Chemical_Chemical.Examples.Hemoglobin.HemoglobinCarboxylation  -abortSlowSimulation -alarm=480 -lv LOG_STATS > Chemical_Chemical.Examples.Hemoglobin.HemoglobinCarboxylation.pipe 2>&1)