Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries/ --ompython_omhome=/usr Physiolibrary_Physiolibrary.Chemical.Examples.CheckSubstancesData.StandardElectrochemicalCell2.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0-master/package.mo", uses=false)
Using package Physiolibrary with version 3.0.0-beta1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0-master/package.mo)
Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo)
Using package Modelica with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo)
Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo)
Running command: translateModel(Physiolibrary.Chemical.Examples.CheckSubstancesData.StandardElectrochemicalCell2,tolerance=1e-06,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.Chemical.Examples.CheckSubstancesData.StandardElectrochemicalCell2")
translateModel(Physiolibrary.Chemical.Examples.CheckSubstancesData.StandardElectrochemicalCell2,tolerance=1e-06,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.Chemical.Examples.CheckSubstancesData.StandardElectrochemicalCell2")
[<interactive>:1:1-1:32:writable] Error: Class GC_set_max_heap_size not found in scope <global scope> (looking for a function or record).
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.001851/0.001851, allocations: 177.3 kB / 7.456 MB, free: 2.238 MB / 5.871 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo): time 1.199/1.199, allocations: 221.4 MB / 229.3 MB, free: 2.988 MB / 186.7 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.0009224/0.0009226, allocations: 101 kB / 280.1 MB, free: 1.211 MB / 218.7 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0-master/package.mo): time 0.3294/0.3294, allocations: 37.08 MB / 368 MB, free: 47.46 MB / 298.7 MB
Notification: Performance of FrontEnd - loaded program: time 1.158e-05/1.16e-05, allocations: 4 kB / 434.1 MB, free: 4.898 MB / 314.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.1249/0.1249, allocations: 60.08 MB / 494.2 MB, free: 8.719 MB / 378.7 MB
Notification: Performance of FrontEnd - scodeFlatten: time 0.3513/0.4763, allocations: 107.9 MB / 0.5879 GB, free: 7.625 MB / 410.7 MB
Notification: Performance of FrontEnd - mkProgramGraph: time 0.0002521/0.4766, allocations: 78.36 kB / 0.588 GB, free: 7.551 MB / 410.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0-master/Chemical.mo:4722:7-4722:66:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System cathode.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Physiolibrary.Chemical.Components.Solution$cathode.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0-master/Chemical.mo:4722:7-4722:66:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System anode.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Physiolibrary.Chemical.Components.Solution$anode.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0-master/Chemical.mo:3037:6-3037:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System H2O.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Physiolibrary.Chemical.Sources.PureSubstance$H2O.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0-master/Chemical.mo:2844:5-2845:38:writable] Notification: From here:
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0-master/Chemical.mo:5124:5-5125:53:writable] Error: Duplicate elements (due to inherited elements) not identical:
  first element is:  flow Modelica.Units.SI.MolarFlowRate q "Molar change of the substance"
  second element is: flow .Real q "Change of the substance in nonspecific units"
Error: Error occurred while flattening model Physiolibrary.Chemical.Examples.CheckSubstancesData.StandardElectrochemicalCell2