Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries/ --ompython_omhome=/usr Chemical_Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false) Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo) Using package Modelica with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo) Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo) Using package Chemical with version 1.4.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo) Running command: translateModel(Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC,tolerance=1e-06,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Chemical_Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC") translateModel(Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC,tolerance=1e-06,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Chemical_Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC") [:1:1-1:32:writable] Error: Class GC_set_max_heap_size not found in scope (looking for a function or record). Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo): time 0.06596/0.06596, allocations: 15.26 MB / 22.54 MB, free: 1.109 MB / 18.57 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.0009455/0.0009456, allocations: 187.5 kB / 27.31 MB, free: 0 / 18.57 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo): time 1.105/1.105, allocations: 221.4 MB / 253.3 MB, free: 10.7 MB / 202.7 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.0008561/0.0008562, allocations: 96.66 kB / 308.4 MB, free: 10.7 MB / 250.7 MB Notification: Performance of FrontEnd - loaded program: time 5.19e-06/5.22e-06, allocations: 1.688 kB / 369 MB, free: 54 MB / 298.7 MB Notification: Performance of FrontEnd - Absyn->SCode: time 0.06966/0.06968, allocations: 54.63 MB / 423.7 MB, free: 14.43 MB / 298.7 MB Notification: Performance of FrontEnd - scodeFlatten: time 0.2389/0.3086, allocations: 105.1 MB / 0.5164 GB, free: 8.367 MB / 362.7 MB Notification: Performance of FrontEnd - mkProgramGraph: time 0.0001729/0.3088, allocations: 71.41 kB / 0.5165 GB, free: 8.363 MB / 362.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:4721:7-4721:66:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System solution.system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Solution. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System oxygen_in_air.system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Sources.ExternalIdealGasSubstance$oxygen_in_air. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System H2O.system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$H2O. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System DeoxyTHm[4].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$DeoxyTHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System DeoxyTHm[3].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$DeoxyTHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System DeoxyTHm[2].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$DeoxyTHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System DeoxyTHm[1].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$DeoxyTHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System oxygen_unbound.system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$oxygen_unbound. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System OxyRHm[4].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$OxyRHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System OxyRHm[3].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$OxyRHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System OxyRHm[2].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$OxyRHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System OxyRHm[1].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$OxyRHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System DeoxyRHm[4].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$DeoxyRHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System DeoxyRHm[3].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$DeoxyRHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System DeoxyRHm[2].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$DeoxyRHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System DeoxyRHm[1].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$DeoxyRHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System OxyTHm[4].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$OxyTHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System OxyTHm[3].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$OxyTHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System OxyTHm[2].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$OxyTHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System OxyTHm[1].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$OxyTHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. Notification: Performance of FrontEnd: time 0.3361/0.6449, allocations: 143.3 MB / 0.6564 GB, free: 11.4 MB / 474.7 MB Notification: Performance of Transformations before backend: time 0.0002295/0.6451, allocations: 108 kB / 0.6565 GB, free: 11.3 MB / 474.7 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 1226 * Number of variables: 1226 Notification: Performance of Generate backend data structure: time 0.01238/0.6575, allocations: 5.853 MB / 0.6622 GB, free: 5.402 MB / 474.7 MB Notification: Performance of prepare preOptimizeDAE: time 3.021e-05/0.6575, allocations: 8.031 kB / 0.6623 GB, free: 5.395 MB / 474.7 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.005108/0.6627, allocations: 1.564 MB / 0.6638 GB, free: 3.82 MB / 474.7 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.1242/0.7868, allocations: 4.637 MB / 0.6683 GB, free: 107.2 MB / 474.7 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0003813/0.7872, allocations: 0.5145 MB / 0.6688 GB, free: 106.9 MB / 474.7 MB Notification: Performance of preOpt expandDerOperator (simulation): time 0.001322/0.7886, allocations: 303.8 kB / 0.6691 GB, free: 106.9 MB / 474.7 MB Notification: Performance of preOpt removeEqualFunctionCalls (simulation): time 0.01912/0.8077, allocations: 19 MB / 0.6877 GB, free: 106.9 MB / 474.7 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.01338/0.8211, allocations: 11.49 MB / 0.6989 GB, free: 106.5 MB / 474.7 MB Notification: Performance of preOpt findStateOrder (simulation): time 8.307e-05/0.8212, allocations: 3.562 kB / 0.6989 GB, free: 106.5 MB / 474.7 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0005162/0.8217, allocations: 3.844 kB / 0.6989 GB, free: 106.5 MB / 474.7 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 6.456e-05/0.8218, allocations: 114.4 kB / 0.699 GB, free: 106.5 MB / 474.7 MB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.05161/0.8734, allocations: 42.04 MB / 0.74 GB, free: 99.29 MB / 474.7 MB Notification: Performance of preOpt comSubExp (simulation): time 0.02426/0.8977, allocations: 17.84 MB / 0.7575 GB, free: 93.64 MB / 474.7 MB Notification: Performance of preOpt resolveLoops (simulation): time 0.007497/0.9053, allocations: 7.819 MB / 0.7651 GB, free: 90.67 MB / 474.7 MB Notification: Performance of preOpt evalFunc (simulation): time 0.0008704/0.9061, allocations: 0.6568 MB / 0.7657 GB, free: 90.52 MB / 474.7 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 3.86e-05/0.9062, allocations: 97.64 kB / 0.7658 GB, free: 90.43 MB / 474.7 MB Notification: Performance of pre-optimization done (n=600): time 7.133e-06/0.9062, allocations: 0 / 0.7658 GB, free: 90.43 MB / 474.7 MB Notification: Performance of matching and sorting (n=744): time 0.1774/1.084, allocations: 69.19 MB / 0.8334 GB, free: 46.07 MB / 474.7 MB Notification: Performance of inlineWhenForInitialization (initialization): time 4.651e-05/1.084, allocations: 121 kB / 0.8335 GB, free: 45.94 MB / 474.7 MB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.003921/1.088, allocations: 3.403 MB / 0.8368 GB, free: 42.98 MB / 474.7 MB Notification: Performance of collectPreVariables (initialization): time 0.001062/1.089, allocations: 25.7 kB / 0.8369 GB, free: 42.95 MB / 474.7 MB Notification: Performance of collectInitialEqns (initialization): time 0.0005512/1.089, allocations: 1.271 MB / 0.8381 GB, free: 42.04 MB / 474.7 MB Notification: Performance of collectInitialBindings (initialization): time 0.002854/1.092, allocations: 2.401 MB / 0.8405 GB, free: 39.91 MB / 474.7 MB Notification: Performance of simplifyInitialFunctions (initialization): time 0.000884/1.093, allocations: 3.938 kB / 0.8405 GB, free: 39.9 MB / 474.7 MB Notification: Performance of setup shared object (initialization): time 0.0002885/1.093, allocations: 0.567 MB / 0.841 GB, free: 39.41 MB / 474.7 MB Notification: Performance of preBalanceInitialSystem (initialization): time 0.009095/1.102, allocations: 9.818 MB / 0.8506 GB, free: 30.64 MB / 474.7 MB Notification: Performance of partitionIndependentBlocks (initialization): time 0.009229/1.112, allocations: 10.55 MB / 0.8609 GB, free: 19.91 MB / 474.7 MB Notification: Performance of analyzeInitialSystem (initialization): time 0.01692/1.129, allocations: 11.78 MB / 0.8724 GB, free: 8.094 MB / 474.7 MB Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.364e-05/1.129, allocations: 4 kB / 0.8724 GB, free: 8.09 MB / 474.7 MB Notification: Performance of matching and sorting (n=852) (initialization): time 0.1953/1.324, allocations: 30.21 MB / 0.9019 GB, free: 99.66 MB / 474.7 MB Notification: Performance of prepare postOptimizeDAE: time 1.756e-05/1.324, allocations: 7.516 kB / 0.9019 GB, free: 99.66 MB / 474.7 MB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 3.364e-05/1.324, allocations: 17.91 kB / 0.9019 GB, free: 99.66 MB / 474.7 MB Notification: Performance of postOpt tearingSystem (initialization): time 0.01025/1.334, allocations: 4.442 MB / 0.9063 GB, free: 99.62 MB / 474.7 MB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.008366/1.343, allocations: 1.712 MB / 0.9079 GB, free: 99.62 MB / 474.7 MB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.02977/1.372, allocations: 18.98 MB / 0.9265 GB, free: 95.42 MB / 474.7 MB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.02168/1.394, allocations: 1.365 MB / 0.9278 GB, free: 95.42 MB / 474.7 MB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.002004/1.396, allocations: 491.9 kB / 0.9283 GB, free: 95.42 MB / 474.7 MB Warning: Iteration variables with default zero start attribute in torn nonlinear equation system: DeoxyTHm[1].solution.n:DUMMY_STATE(flow=false min = 0.0 max = 0.0 unit = "mol" ) "Amount of the solution" type: Real [4] Warning: Iteration variables with default zero start attribute in torn nonlinear equation system: DeoxyTHm[1].solution.I:VARIABLE(flow=false min = 0.0 max = 0.0 unit = "1" ) "Mole fraction based ionic strength of the solution" type: Real [4] Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 61 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (760): * Single equations (assignments): 754 * Array equations: 2 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (linear and non-linear blocks): 0 * Torn equation systems: 4 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems: 2 {(9,100.0%) 4,(1,100.0%) 3} * Non-linear torn systems: 2 {1 38,1 3} Notification: Performance of prepare postOptimizeDAE: time 0.001546/1.398, allocations: 210.9 kB / 0.9285 GB, free: 95.32 MB / 474.7 MB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.001295/1.399, allocations: 488.8 kB / 0.9289 GB, free: 95.22 MB / 474.7 MB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.09394/1.493, allocations: 35.91 MB / 0.964 GB, free: 93.95 MB / 474.7 MB Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.08765/1.581, allocations: 31.44 MB / 0.9947 GB, free: 90.65 MB / 474.7 MB Notification: Performance of postOpt constantLinearSystem (simulation): time 2.792e-05/1.581, allocations: 4.688 kB / 0.9947 GB, free: 90.65 MB / 474.7 MB Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.0002009/1.581, allocations: 44.44 kB / 0.9948 GB, free: 90.65 MB / 474.7 MB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.1264/1.707, allocations: 75.44 MB / 1.068 GB, free: 21.29 MB / 474.7 MB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 7.116e-05/1.708, allocations: 22.69 kB / 1.068 GB, free: 21.27 MB / 474.7 MB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.007618/1.715, allocations: 1.597 MB / 1.07 GB, free: 19.75 MB / 474.7 MB Notification: Performance of postOpt tearingSystem (simulation): time 0.04028/1.755, allocations: 11.67 MB / 1.081 GB, free: 8.121 MB / 474.7 MB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.001629/1.757, allocations: 255.4 kB / 1.082 GB, free: 7.871 MB / 474.7 MB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.1909/1.948, allocations: 47.12 MB / 1.128 GB, free: 91.37 MB / 474.7 MB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 0.007875/1.956, allocations: 4.289 MB / 1.132 GB, free: 90.01 MB / 474.7 MB Notification: Performance of postOpt detectJacobianSparsePattern (simulation): time 0.09372/2.05, allocations: 50.03 MB / 1.181 GB, free: 84.07 MB / 474.7 MB Notification: Performance of postOpt removeConstants (simulation): time 0.005004/2.055, allocations: 2.277 MB / 1.183 GB, free: 83.19 MB / 474.7 MB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.001285/2.056, allocations: 42.61 kB / 1.183 GB, free: 83.19 MB / 474.7 MB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.01125/2.067, allocations: 0.6934 MB / 1.184 GB, free: 83.07 MB / 474.7 MB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.001132/2.068, allocations: 0.653 MB / 1.184 GB, free: 82.97 MB / 474.7 MB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.0008082/2.069, allocations: 408.4 kB / 1.185 GB, free: 82.91 MB / 474.7 MB Notification: Performance of sort global known variables: time 0.002928/2.072, allocations: 2.664 MB / 1.187 GB, free: 81.93 MB / 474.7 MB Notification: Performance of remove unused functions: time 0.01688/2.089, allocations: 7.689 MB / 1.195 GB, free: 81.89 MB / 474.7 MB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 101 * Number of states: 19 ($STATESET1.x[19],$STATESET1.x[18],$STATESET1.x[17],$STATESET1.x[16],$STATESET1.x[15],$STATESET1.x[14],$STATESET1.x[13],$STATESET1.x[12],$STATESET1.x[11],$STATESET1.x[10],$STATESET1.x[9],$STATESET1.x[8],$STATESET1.x[7],$STATESET1.x[6],$STATESET1.x[5],$STATESET1.x[4],$STATESET1.x[3],$STATESET1.x[2],$STATESET1.x[1]) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (773): * Single equations (assignments): 769 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (linear and non-linear blocks): 0 * Torn equation systems: 4 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems: 2 {(9,100.0%) 4,(1,100.0%) 3} * Non-linear torn systems: 2 {1 38,20 27} Notification: Performance of Backend phase and start with SimCode phase: time 0.002501/2.092, allocations: 1.485 MB / 1.196 GB, free: 81.65 MB / 474.7 MB Notification: Performance of simCode: created initialization part: time 0.03067/2.122, allocations: 22.54 MB / 1.218 GB, free: 67.83 MB / 474.7 MB Notification: Performance of simCode: created event and clocks part: time 1.333e-05/2.122, allocations: 4.375 kB / 1.218 GB, free: 67.82 MB / 474.7 MB Notification: Performance of simCode: created simulation system equations: time 0.02537/2.148, allocations: 16.36 MB / 1.234 GB, free: 54.39 MB / 474.7 MB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.00789/2.156, allocations: 1.485 MB / 1.236 GB, free: 53.29 MB / 474.7 MB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.0262/2.182, allocations: 20.38 MB / 1.256 GB, free: 35.44 MB / 474.7 MB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.006555/2.188, allocations: 5.492 MB / 1.261 GB, free: 31.48 MB / 474.7 MB Notification: Performance of SimCode: time 5.81e-07/2.188, allocations: 0 / 1.261 GB, free: 31.48 MB / 474.7 MB Notification: Performance of Templates: time 0.3504/2.539, allocations: 194.4 MB / 1.451 GB, free: 27.81 MB / 474.7 MB make -j1 -f Chemical_Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.makefile (rm -f Chemical_Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.pipe ; mkfifo Chemical_Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.pipe ; head -c 1048576 < Chemical_Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.pipe >> ../files/Chemical_Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.sim & ./Chemical_Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC -abortSlowSimulation -alarm=480 -lv LOG_STATS > Chemical_Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.pipe 2>&1)