Pharmacolibrary test using OpenModelica

Total Frontend Backend SimCode Templates Compilation Simulation Verification
90 71 71 71 71 71 71 0

Test started: 2026-10-08 19:21:04
Total time taken: 0:07:33
System info: ryzen-9950x: AMD Ryzen 9 9950X3D 16-Core Processor, 124 GB RAM, Ubuntu 26.04.1 LTS

OpenModelica Version: v1.28.0-dev.1333+gdbbc0a322c.cmake
OpenModelicaLibraryTesting Changes

CommitDateAuthorSummary
78010ce2026-10-08 20:49:41 +0200Martin SjölundChoose the solver of a pull request run

Tested Library: Pharmacolibrary 25.09

{
 "path": "Pharmacolibrary",
 "sha": "de5fc7280ddaefacbac29ec6e89daea657dd2bbc",
 "support": "fullSupport",
 "uses": {
  "Modelica": "4.0.0"
 },
 "version": "25.9.0",
 "zipfile": "https://github.com/creative-connections/Pharmacolibrary/archive/de5fc7280ddaefacbac29ec6e89daea657dd2bbc.zip"
}

BuildModel time limit: 660s
Simulation time limit: 240s
Default tolerance: 1e-06
Default number of intervals: 2500
Optimization level: Tool default

Flags:
setCommandLineOptions("-d=nogen");
setCommandLineOptions("-d=initialization");
setCommandLineOptions("-d=backenddaeinfo");
setCommandLineOptions("-d=discreteinfo");
setCommandLineOptions("-d=stateselection");
setCommandLineOptions("-d=execstat");
setMatchingAlgorithm("PFPlusExt");
setIndexReductionMethod("dynamicStateSelection");
Config:
{
 "library": "Pharmacolibrary"
}

Links are provided if getErrorString() or the simulation generates output. The links are coded with red if there were errors, yellow if there were warnings, and normal links if there are only notifications.

ModelVerifiedSimulateTotal buildModelParsingFrontendBackendSimCodeTemplatesCompileTotal Execution
Pharmacolibrary.DevModels.PKOneCompartmentModelPeriodic (sim) 0.151.422.830.010.010.000.410.995.03
Pharmacolibrary.DevModels.PKTwoCompartmentModel (sim) 0.011.412.980.010.010.000.381.015.02
Pharmacolibrary.DevModels.PKTwoCompartmentModelComparison (sim) 0.071.532.860.010.410.010.021.085.04
Pharmacolibrary.DevModels.PKTwoCompartmentModelOral (sim) 0.021.562.850.010.010.000.361.185.02
Pharmacolibrary.DevModels.PKWholeBodyModel 0.000.012.890.010.000.000.000.003.59
Pharmacolibrary.DevModels.Palivizumab.PKTwoCompartmentPalivizumab (sim) 0.011.472.880.010.010.000.341.105.01
Pharmacolibrary.DevModels.Palivizumab.ViralInfectionDynamics1 (sim) 0.010.872.920.000.000.000.010.854.39
Pharmacolibrary.DevModels.Palivizumab.ViralInfectionDynamics2 (sim) 0.021.502.840.480.010.000.020.994.95
Pharmacolibrary.DevModels.Paracetamol.AcetaminophenEquations (sim) 0.011.392.850.440.000.000.010.934.78
Pharmacolibrary.DevModels.Paracetamol.ParacetamolComponents 0.000.022.750.020.000.000.000.003.35
Pharmacolibrary.DevModels.Paracetamol.ParacetamolEquations2 (sim) 0.040.972.940.000.000.000.010.944.57
Pharmacolibrary.DevModels.Remdesivir.ComponentRemdesivirPK 0.000.012.810.010.000.000.000.003.40
Pharmacolibrary.DevModels.Remdesivir.ComponentRemdesivirPKPD 0.000.022.880.020.000.000.000.003.46
Pharmacolibrary.DevModels.Remdesivir.Eq10RemdesivirPK (sim) 0.091.352.860.010.010.380.020.944.99
Pharmacolibrary.DevModels.SingleCompartment.GentamicinePK 0.000.022.920.020.000.000.000.003.52
Pharmacolibrary.DevModels.SingleCompartment.LithiumPK 0.000.022.940.020.000.000.000.003.59
Pharmacolibrary.DevModels.SingleCompartment.PBPKModel 0.000.022.830.020.000.000.000.003.43
Pharmacolibrary.DevModels.SingleCompartment.ParacetamolPK 0.000.022.980.020.000.000.000.003.59
Pharmacolibrary.DevModels.SingleCompartment.RemdesivirPK 0.000.052.860.050.000.000.000.003.55
Pharmacolibrary.DevModels.SingleCompartment.TheopyllinePK 0.000.022.900.020.000.000.000.003.55
Pharmacolibrary.DevModels.SingleDoseArteryTissuePeripheral 0.000.012.930.010.000.000.000.003.52
Pharmacolibrary.DevModels.SingleDoseArteryTissuePeripheralElimination 0.000.032.860.030.000.000.000.003.48
Pharmacolibrary.DevModels.SingleDoseArteryTissueVenous 0.000.022.890.020.000.000.000.003.59
Pharmacolibrary.DevModels.SingleDoseDiffusion (sim) 0.311.432.900.010.010.000.361.055.25
Pharmacolibrary.DevModels.SingleDoseIAFloxuridine 0.000.012.840.010.000.000.000.003.45
Pharmacolibrary.DevModels.SingleDoseIVAmiodarone 0.000.022.790.020.000.000.000.003.35
Pharmacolibrary.DevModels.SingleDoseIVAmiodaroneEquations 0.000.012.940.010.000.000.000.003.63
Pharmacolibrary.DevModels.SingleDoseIntravenousWholeBody (sim) 1.341.952.930.400.030.010.031.476.89
Pharmacolibrary.DevModels.SingleDoseLumen (sim) 0.331.482.980.010.010.010.411.045.50
Pharmacolibrary.DevModels.SingleDoseVeinsGutSpleenPortalVeinLiver (sim) 0.401.602.920.010.010.360.021.205.57
Pharmacolibrary.DevModels.Systems.PKOneCompartmentEquations (sim) 0.051.362.930.430.010.000.010.905.09
Pharmacolibrary.Drugs.B_BloodAndBloodFormingOrgans.B01A_AntithromboticAgents.B01AB05_Enoxaparin.Enoxaparin (sim) 0.121.372.780.010.010.000.400.964.82
Pharmacolibrary.Drugs.C_CardiovascularSystem.C01A_CardiacGlycosides.C01AA05_Digoxin.Digoxin_1 (sim) 0.151.392.790.010.010.010.361.014.93
Pharmacolibrary.Drugs.C_CardiovascularSystem.C01A_CardiacGlycosides.C01AA05_Digoxin.Digoxin_IV (sim) 0.121.362.770.010.010.000.331.014.79
Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites (sim) 1.701.612.760.010.370.010.021.206.68
Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J06B_Immunoglobulins.J06BD01_Palivizumab.Palivizumab_IM (sim) 0.261.372.870.010.010.330.021.005.13
Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J06B_Immunoglobulins.J06BD08_Nirsevimab.Nirsevimab_IM (sim) 0.611.352.840.010.010.330.020.985.35
Pharmacolibrary.Drugs.L_AntineoplasticAndImmunomodulatingAgents.L01B_Antimetabolites.L01BC02_Fluorouracil.Fluorouracil_1C (sim) 0.151.372.810.010.010.000.390.964.96
Pharmacolibrary.Drugs.M_MusculoSkeletalSystem.M01A_AntiinflammatoryAndAntirheumaticProductsNonStero.M01AE01_Ibuprofen.Ibuprofen (sim) 0.181.392.830.010.010.320.021.035.00
Pharmacolibrary.Drugs.N_NervousSystem.N02A_Opioids.N02AB03_Fentanyl.Fentanyl_3C (sim) 0.131.392.850.010.010.310.021.045.04
Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Comparison_healthy_SMA 0.000.782.780.780.000.000.000.004.18
Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Paracetamol_SMA (sim) 0.131.542.810.010.010.000.371.155.09
Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Paracetamol_healthy 0.000.932.750.930.000.000.000.004.28
Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Paracetamol_healthy_oral (sim) 0.151.532.730.030.010.010.441.045.01
Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Paracetamol_metabolites (sim) 0.061.532.750.020.360.010.031.124.91
Pharmacolibrary.Drugs.N_NervousSystem.N05A_Antipsychotics.N05AN01_Lithium.Lithium (sim) 0.161.432.900.010.010.000.361.055.10
Pharmacolibrary.Drugs.N_NervousSystem.N05C_HypnoticsAndSedatives.N05CD08_Midazolam.Midazolam_2C (sim) 0.181.402.850.010.010.010.381.005.02
Pharmacolibrary.Drugs.N_NervousSystem.N06B_PsychostimulantsAgentsUsedForAdhdAndNootropics.N06BC01_Caffeine.Caffeine (sim) 0.261.492.910.010.010.010.401.065.30
Pharmacolibrary.Drugs.Z_Unclassified.J06B_ProbableImmunoglobulins.DZIF10c.DZIF10c_1C (sim) 0.061.562.850.010.010.010.391.145.02
Pharmacolibrary.Drugs.Z_Unclassified.J06B_ProbableImmunoglobulins.MHAA459A.MHAA459A_2C (sim) 0.201.502.840.010.010.340.021.125.19
Pharmacolibrary.Examples.PBPK_OralDoseGUTWholeBody (sim) 0.022.002.990.460.040.010.031.465.59
Pharmacolibrary.Examples.PBPK_SingleDoseVenousArteryTissue (sim) 0.021.412.860.010.010.010.450.934.88
Pharmacolibrary.Examples.PKOneCompartmentModel (sim) 0.171.363.640.010.010.000.450.895.81
Pharmacolibrary.Examples.PKOneCompartmentModelPeriodic (sim) 0.111.362.870.010.010.000.360.994.94
Pharmacolibrary.Examples.PKOneCompartmentSimplestModel (sim) 0.011.344.170.010.010.430.020.886.19
Pharmacolibrary.Examples.PKPD_Midazolam (sim) 0.111.493.030.010.010.410.021.035.22
Pharmacolibrary.Examples.PKPD_integration.PKPD_HemodynamicsMeurs_flatNorm (sim) 8.553.972.780.520.090.020.113.2316.58
Pharmacolibrary.Examples.PKPG_1C_Gentamicin (sim) 0.241.412.870.010.010.010.420.965.17
Pharmacolibrary.Examples.PKPG_1C_GentamicineEquation (sim) 0.011.372.840.010.470.000.010.884.87
Pharmacolibrary.Examples.PKThreeCompartmentModel (sim) 0.021.452.860.010.010.010.371.064.93
Pharmacolibrary.Examples.PKTwoCompartmentModel (sim) 0.021.452.820.010.010.000.361.084.90
Pharmacolibrary.Examples.PK_1C_Digoxin (sim) 0.171.432.900.010.010.010.470.945.05
Pharmacolibrary.Examples.PK_1C_Gentamicin (sim) 0.161.353.470.010.010.000.450.885.72
Pharmacolibrary.Examples.PK_1C_GentamicinEquations (sim) 0.011.253.760.440.000.000.010.795.70
Pharmacolibrary.Examples.PK_1C_GentamicinEquations2 (sim) 0.011.172.790.360.000.000.010.794.61
Pharmacolibrary.Examples.PK_1C_GentamicineSimple (sim) 0.011.284.080.000.010.450.010.816.04
Pharmacolibrary.Examples.PK_1C_Lithium2 (sim) 0.141.372.790.010.010.000.321.034.87
Pharmacolibrary.Examples.PK_1C_LithiumCarbonate (sim) 1.111.422.910.010.010.000.351.056.05
Pharmacolibrary.Examples.PK_2C_IVMidazolam (sim) 0.071.482.840.010.010.010.361.104.97
Pharmacolibrary.Examples.PK_3C_FentanylIV (sim) 0.011.392.830.010.010.000.341.034.83
Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine (sim) 0.021.652.820.020.400.010.031.205.10
Pharmacolibrary.Examples.PK_Lithium.PGx_experiment (sim) 0.012.062.730.420.030.010.041.565.43
Pharmacolibrary.Examples.PK_Lithium.PK_1C_Lithium (sim) 0.141.412.810.010.010.000.351.034.99
Pharmacolibrary.Examples.PK_Lithium.PK_1C_Lithium_CI (sim) 0.221.752.680.020.360.010.031.345.29
Pharmacolibrary.Examples.Paracetamol_Experiment (sim) 0.031.702.850.020.370.010.031.275.18
Pharmacolibrary.Examples.Pharmacogenomics.PKPG_2C_generic (sim) 0.872.612.930.450.060.020.072.016.96
Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Gentamicin_Experiment (sim) 0.021.862.850.010.400.010.031.415.30
Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment (sim) 0.601.842.960.020.440.010.041.346.02
Pharmacolibrary.Examples.Pharmacogenomics.PK_2C_generic (sim) 0.032.432.920.400.040.010.051.926.02
Pharmacolibrary.Examples.Pharmacogenomics.PK_2C_single (sim) 0.031.412.840.010.010.330.021.054.89
Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin (sim) 0.191.502.850.010.010.000.371.105.12
Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Lithium (sim) 2.211.522.920.010.010.390.041.077.22
Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen (sim) 0.241.462.920.020.410.010.021.005.26
Pharmacolibrary.Examples.Pharmacogenomics.Patient_PK_2C_Ibuprofen (sim) 0.141.492.900.010.010.370.021.085.15
Pharmacolibrary.Pharmacogenomics.PGx.GenotypePhenotypeComponent 0.000.012.780.010.000.000.000.003.41
Pharmacolibrary.Pharmacokinetic.Models.PBPK_whole_body (sim) 0.012.372.790.380.050.010.081.845.73
Pharmacolibrary.Pharmacokinetic.Models.PK_1C (sim) 0.111.342.870.010.010.010.360.964.91
Pharmacolibrary.Pharmacokinetic.Models.PK_2C (sim) 0.161.422.890.010.020.010.361.015.11
Pharmacolibrary.Pharmacokinetic.Models.PK_2C_enteral (sim) 0.191.382.810.010.010.340.021.004.96
Pharmacolibrary.Pharmacokinetic.Models.PK_3C_enteral (sim) 0.191.512.950.010.370.010.021.115.26