Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Bodylight_Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0007882/0.0007882, allocations: 80.94 kB / 19.94 MB, free: 4.543 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.0009782/0.0009782, allocations: 177 kB / 23.36 MB, free: 1.125 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9206/0.9206, allocations: 177.2 MB / 203.8 MB, free: 5.453 MB / 186.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo): time 0.0599/0.0599, allocations: 12.76 MB / 273 MB, free: 144 kB / 250.7 MB " [Timeout remaining time 180] Using package Bodylight with version 1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Bodylight.Chemical.Examples.AcidBase.AlbuminTitration,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.AcidBase.AlbuminTitration") translateModel(Bodylight.Chemical.Examples.AcidBase.AlbuminTitration,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.AcidBase.AlbuminTitration") [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 1.232e-06/1.232e-06, allocations: 3.5 kB / 293.9 MB, free: 11.97 MB / 266.7 MB Notification: Performance of FrontEnd - Absyn->SCode: time 1.277e-05/1.401e-05, allocations: 3.344 kB / 293.9 MB, free: 11.97 MB / 266.7 MB Notification: Performance of NFInst.instantiate(Bodylight.Chemical.Examples.AcidBase.AlbuminTitration): time 0.003192/0.003206, allocations: 3.336 MB / 297.2 MB, free: 9.738 MB / 266.7 MB Notification: Performance of NFInst.instExpressions: time 0.004176/0.007383, allocations: 3.739 MB / 301 MB, free: 7.395 MB / 266.7 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.0002335/0.007616, allocations: 22.88 kB / 301 MB, free: 7.379 MB / 266.7 MB Notification: Performance of NFTyping.typeComponents: time 0.0001751/0.007791, allocations: 68.2 kB / 301 MB, free: 7.336 MB / 266.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.H3O.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.H3O.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.H3O.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.A.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.A.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.A.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.HA.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.HA.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.HA.Utilities.UnitConversions.findUnit'. Notification: Performance of NFTyping.typeBindings: time 0.001315/0.009106, allocations: 0.5711 MB / 301.6 MB, free: 7.047 MB / 266.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.H3O.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.H3O.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.A.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.A.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.HA.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.HA.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. Notification: Performance of NFTyping.typeClassSections: time 0.001112/0.01022, allocations: 0.6223 MB / 302.2 MB, free: 6.738 MB / 266.7 MB Notification: Performance of NFFlatten.flatten: time 0.04487/0.05509, allocations: 75.4 MB / 377.6 MB, free: 13.04 MB / 346.7 MB Notification: Performance of NFFlatten.resolveConnections: time 0.0158/0.07089, allocations: 9.891 MB / 387.5 MB, free: 2.965 MB / 346.7 MB Notification: Performance of NFEvalConstants.evaluate: time 0.06389/0.1348, allocations: 36.9 MB / 424.4 MB, free: 13.98 MB / 394.7 MB Notification: Performance of NFSimplifyModel.simplify: time 0.3375/0.4723, allocations: 64.14 MB / 488.6 MB, free: 28.3 MB / 394.8 MB Notification: Performance of NFPackage.collectConstants: time 0.01638/0.4886, allocations: 3.199 MB / 491.8 MB, free: 28.3 MB / 394.8 MB Notification: Performance of NFFlatten.collectFunctions: time 0.02407/0.5127, allocations: 3.52 MB / 495.3 MB, free: 28.3 MB / 394.8 MB Notification: Performance of NFScalarize.scalarize: time 0.02382/0.5365, allocations: 14.7 MB / 0.498 GB, free: 21.59 MB / 394.8 MB Notification: Performance of NFVerifyModel.verify: time 0.04221/0.5787, allocations: 18.71 MB / 0.5163 GB, free: 15.49 MB / 394.8 MB Notification: Performance of NFConvertDAE.convert: time 0.07316/0.6519, allocations: 56.83 MB / 0.5718 GB, free: 15.06 MB / 442.8 MB Notification: Performance of FrontEnd - DAE generated: time 6.873e-06/0.6519, allocations: 0 / 0.5718 GB, free: 15.06 MB / 442.8 MB Notification: Performance of FrontEnd: time 1.323e-06/0.6519, allocations: 0.875 kB / 0.5718 GB, free: 15.06 MB / 442.8 MB Notification: Performance of Transformations before backend: time 0.003379/0.6553, allocations: 0 / 0.5718 GB, free: 15.06 MB / 442.8 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 7426 * Number of variables: 7426 Notification: Performance of Generate backend data structure: time 0.3817/1.037, allocations: 58.58 MB / 0.629 GB, free: 120.9 MB / 458.9 MB Notification: Performance of prepare preOptimizeDAE: time 4.316e-05/1.037, allocations: 11.98 kB / 0.629 GB, free: 120.8 MB / 458.9 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.02409/1.061, allocations: 7.475 MB / 0.6363 GB, free: 113.4 MB / 458.9 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.06888/1.13, allocations: 32.32 MB / 0.6679 GB, free: 83.09 MB / 458.9 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.002093/1.132, allocations: 2.363 MB / 0.6702 GB, free: 80.72 MB / 458.9 MB Notification: Performance of preOpt expandDerOperator (simulation): time 0.007388/1.139, allocations: 3.222 MB / 0.6733 GB, free: 77.5 MB / 458.9 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.08987/1.229, allocations: 22.94 MB / 0.6957 GB, free: 53.82 MB / 458.9 MB Notification: Performance of preOpt findStateOrder (simulation): time 0.0009886/1.23, allocations: 31.69 kB / 0.6958 GB, free: 53.79 MB / 458.9 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.005357/1.236, allocations: 1.16 MB / 0.6969 GB, free: 52.63 MB / 458.9 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.000306/1.236, allocations: 0.6914 MB / 0.6976 GB, free: 51.94 MB / 458.9 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.03137/1.267, allocations: 10.33 MB / 0.7077 GB, free: 41.59 MB / 458.9 MB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.5235/1.791, allocations: 91.04 MB / 0.7966 GB, free: 94.02 MB / 491.2 MB Notification: Performance of preOpt comSubExp (simulation): time 0.009958/1.801, allocations: 10.05 MB / 0.8064 GB, free: 88.23 MB / 491.2 MB Notification: Performance of preOpt resolveLoops (simulation): time 0.003624/1.804, allocations: 3.883 MB / 0.8102 GB, free: 86.22 MB / 491.2 MB Notification: Performance of preOpt evalFunc (simulation): time 0.0005454/1.805, allocations: 373 kB / 0.8105 GB, free: 86.21 MB / 491.2 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0002374/1.805, allocations: 469.5 kB / 0.811 GB, free: 86.07 MB / 491.2 MB Notification: Performance of pre-optimization done (n=1533): time 1.819e-05/1.805, allocations: 3.312 kB / 0.811 GB, free: 86.07 MB / 491.2 MB Notification: Performance of matching and sorting (n=1533): time 0.3406/2.146, allocations: 98.42 MB / 0.9071 GB, free: 14.5 MB / 491.2 MB Notification: Performance of inlineWhenForInitialization (initialization): time 0.0007558/2.147, allocations: 5.882 MB / 0.9128 GB, free: 7.281 MB / 491.2 MB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.06422/2.211, allocations: 38.88 MB / 0.9508 GB, free: 3.613 MB / 0.5109 GB Notification: Performance of collectPreVariables (initialization): time 0.003128/2.214, allocations: 449.6 kB / 0.9512 GB, free: 3.488 MB / 0.5109 GB Notification: Performance of collectInitialEqns (initialization): time 0.01838/2.232, allocations: 18.18 MB / 0.969 GB, free: 10.31 MB / 0.5265 GB Notification: Performance of collectInitialBindings (initialization): time 0.009373/2.242, allocations: 6.186 MB / 0.975 GB, free: 5.523 MB / 0.5265 GB Notification: Performance of simplifyInitialFunctions (initialization): time 0.249/2.491, allocations: 7.779 MB / 0.9826 GB, free: 129.8 MB / 0.5265 GB Notification: Performance of setup shared object (initialization): time 3.987e-05/2.491, allocations: 304.9 kB / 0.9829 GB, free: 129.5 MB / 0.5265 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.0164/2.507, allocations: 4.882 MB / 0.9877 GB, free: 129.3 MB / 0.5265 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.01781/2.525, allocations: 24.19 MB / 1.011 GB, free: 103.2 MB / 0.5265 GB Notification: Performance of analyzeInitialSystem (initialization): time 0.03249/2.558, allocations: 33.31 MB / 1.044 GB, free: 75.04 MB / 0.5265 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0008425/2.558, allocations: 205.2 kB / 1.044 GB, free: 75.04 MB / 0.5265 GB Notification: Performance of matching and sorting (n=5244) (initialization): time 0.2888/2.847, allocations: 99.34 MB / 1.141 GB, free: 8.484 MB / 0.5265 GB Notification: Performance of prepare postOptimizeDAE: time 0.0005066/2.848, allocations: 312 kB / 1.141 GB, free: 8.18 MB / 0.5265 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.00075/2.848, allocations: 0.7031 MB / 1.142 GB, free: 7.477 MB / 0.5265 GB Notification: Performance of postOpt tearingSystem (initialization): time 0.61/3.459, allocations: 191.1 MB / 1.329 GB, free: 29.97 MB / 0.5578 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.01524/3.474, allocations: 7.762 MB / 1.336 GB, free: 23.18 MB / 0.5578 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.4083/3.882, allocations: 65.12 MB / 1.4 GB, free: 121 MB / 0.589 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.03832/3.92, allocations: 5.262 MB / 1.405 GB, free: 121 MB / 0.589 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.006356/3.927, allocations: 1.891 MB / 1.407 GB, free: 121 MB / 0.589 GB Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 3277 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (4372): * Single equations (assignments): 4371 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 1 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 0 systems * Non-linear torn systems (#iteration vars, #inner vars): 1 system {(437,436)} Notification: Performance of prepare postOptimizeDAE: time 0.01846/3.945, allocations: 3.041 MB / 1.41 GB, free: 120.9 MB / 0.589 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.01418/3.959, allocations: 3.133 MB / 1.413 GB, free: 120.9 MB / 0.589 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.01166/3.971, allocations: 5.184 MB / 1.418 GB, free: 120.4 MB / 0.589 GB Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0001554/3.971, allocations: 195.7 kB / 1.418 GB, free: 120.4 MB / 0.589 GB Notification: Performance of postOpt constantLinearSystem (simulation): time 4.244e-05/3.971, allocations: 64.59 kB / 1.418 GB, free: 120.4 MB / 0.589 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.0002172/3.971, allocations: 124.9 kB / 1.418 GB, free: 120.4 MB / 0.589 GB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.3754/4.347, allocations: 98.45 MB / 1.514 GB, free: 81.78 MB / 0.589 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0001631/4.347, allocations: 53.12 kB / 1.514 GB, free: 81.78 MB / 0.589 GB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.004704/4.352, allocations: 1.123 MB / 1.516 GB, free: 81.52 MB / 0.589 GB Notification: Performance of postOpt tearingSystem (simulation): time 0.6226/4.974, allocations: 180.7 MB / 1.692 GB, free: 121.2 MB / 0.6046 GB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.003876/4.978, allocations: 0.5562 MB / 1.693 GB, free: 121 MB / 0.6046 GB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.154/5.132, allocations: 57.55 MB / 1.749 GB, free: 87.42 MB / 0.6046 GB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.807e-05/5.132, allocations: 74.09 kB / 1.749 GB, free: 87.36 MB / 0.6046 GB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.5149/5.647, allocations: 102.8 MB / 1.849 GB, free: 147.7 MB / 0.6046 GB Notification: Performance of postOpt removeConstants (simulation): time 0.02465/5.672, allocations: 6.1 MB / 1.855 GB, free: 147.5 MB / 0.6046 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.01526/5.687, allocations: 0.4906 MB / 1.856 GB, free: 147.5 MB / 0.6046 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.02792/5.715, allocations: 0.6993 MB / 1.856 GB, free: 147.5 MB / 0.6046 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.00929/5.724, allocations: 1.585 MB / 1.858 GB, free: 147.4 MB / 0.6046 GB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.00252/5.727, allocations: 392.4 kB / 1.858 GB, free: 147.4 MB / 0.6046 GB Notification: Performance of sorting global known variables: time 0.0407/5.767, allocations: 19.91 MB / 1.878 GB, free: 145.3 MB / 0.6046 GB Notification: Performance of sort global known variables: time 2.4e-07/5.767, allocations: 0 / 1.878 GB, free: 145.3 MB / 0.6046 GB Notification: Performance of remove unused functions: time 0.0659/5.833, allocations: 16.83 MB / 1.894 GB, free: 145.3 MB / 0.6046 GB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 221 * Number of states: 219 (electroneutrality.state[1],molarConservationLaw[218].state[1],molarConservationLaw[217].state[1],molarConservationLaw[216].state[1],molarConservationLaw[215].state[1],molarConservationLaw[214].state[1],molarConservationLaw[213].state[1],molarConservationLaw[212].state[1],molarConservationLaw[211].state[1],molarConservationLaw[210].state[1],molarConservationLaw[209].state[1],molarConservationLaw[208].state[1],molarConservationLaw[207].state[1],molarConservationLaw[206].state[1],molarConservationLaw[205].state[1],molarConservationLaw[204].state[1],molarConservationLaw[203].state[1],molarConservationLaw[202].state[1],molarConservationLaw[201].state[1],molarConservationLaw[200].state[1],molarConservationLaw[199].state[1],molarConservationLaw[198].state[1],molarConservationLaw[197].state[1],molarConservationLaw[196].state[1],molarConservationLaw[195].state[1],molarConservationLaw[194].state[1],molarConservationLaw[193].state[1],molarConservationLaw[192].state[1],molarConservationLaw[191].state[1],molarConservationLaw[190].state[1],molarConservationLaw[189].state[1],molarConservationLaw[188].state[1],molarConservationLaw[187].state[1],molarConservationLaw[186].state[1],molarConservationLaw[185].state[1],molarConservationLaw[184].state[1],molarConservationLaw[183].state[1],molarConservationLaw[182].state[1],molarConservationLaw[181].state[1],molarConservationLaw[180].state[1],molarConservationLaw[179].state[1],molarConservationLaw[178].state[1],molarConservationLaw[177].state[1],molarConservationLaw[176].state[1],molarConservationLaw[175].state[1],molarConservationLaw[174].state[1],molarConservationLaw[173].state[1],molarConservationLaw[172].state[1],molarConservationLaw[171].state[1],molarConservationLaw[170].state[1],molarConservationLaw[169].state[1],molarConservationLaw[168].state[1],molarConservationLaw[167].state[1],molarConservationLaw[166].state[1],molarConservationLaw[165].state[1],molarConservationLaw[164].state[1],molarConservationLaw[163].state[1],molarConservationLaw[162].state[1],molarConservationLaw[161].state[1],molarConservationLaw[160].state[1],molarConservationLaw[159].state[1],molarConservationLaw[158].state[1],molarConservationLaw[157].state[1],molarConservationLaw[156].state[1],molarConservationLaw[155].state[1],molarConservationLaw[154].state[1],molarConservationLaw[153].state[1],molarConservationLaw[152].state[1],molarConservationLaw[151].state[1],molarConservationLaw[150].state[1],molarConservationLaw[149].state[1],molarConservationLaw[148].state[1],molarConservationLaw[147].state[1],molarConservationLaw[146].state[1],molarConservationLaw[145].state[1],molarConservationLaw[144].state[1],molarConservationLaw[143].state[1],molarConservationLaw[142].state[1],molarConservationLaw[141].state[1],molarConservationLaw[140].state[1],molarConservationLaw[139].state[1],molarConservationLaw[138].state[1],molarConservationLaw[137].state[1],molarConservationLaw[136].state[1],molarConservationLaw[135].state[1],molarConservationLaw[134].state[1],molarConservationLaw[133].state[1],molarConservationLaw[132].state[1],molarConservationLaw[131].state[1],molarConservationLaw[130].state[1],molarConservationLaw[129].state[1],molarConservationLaw[128].state[1],molarConservationLaw[127].state[1],molarConservationLaw[126].state[1],molarConservationLaw[125].state[1],molarConservationLaw[124].state[1],molarConservationLaw[123].state[1],molarConservationLaw[122].state[1],molarConservationLaw[121].state[1],molarConservationLaw[120].state[1],molarConservationLaw[119].state[1],molarConservationLaw[118].state[1],molarConservationLaw[117].state[1],molarConservationLaw[116].state[1],molarConservationLaw[115].state[1],molarConservationLaw[114].state[1],molarConservationLaw[113].state[1],molarConservationLaw[112].state[1],molarConservationLaw[111].state[1],molarConservationLaw[110].state[1],molarConservationLaw[109].state[1],molarConservationLaw[108].state[1],molarConservationLaw[107].state[1],molarConservationLaw[106].state[1],molarConservationLaw[105].state[1],molarConservationLaw[104].state[1],molarConservationLaw[103].state[1],molarConservationLaw[102].state[1],molarConservationLaw[101].state[1],molarConservationLaw[100].state[1],molarConservationLaw[99].state[1],molarConservationLaw[98].state[1],molarConservationLaw[97].state[1],molarConservationLaw[96].state[1],molarConservationLaw[95].state[1],molarConservationLaw[94].state[1],molarConservationLaw[93].state[1],molarConservationLaw[92].state[1],molarConservationLaw[91].state[1],molarConservationLaw[90].state[1],molarConservationLaw[89].state[1],molarConservationLaw[88].state[1],molarConservationLaw[87].state[1],molarConservationLaw[86].state[1],molarConservationLaw[85].state[1],molarConservationLaw[84].state[1],molarConservationLaw[83].state[1],molarConservationLaw[82].state[1],molarConservationLaw[81].state[1],molarConservationLaw[80].state[1],molarConservationLaw[79].state[1],molarConservationLaw[78].state[1],molarConservationLaw[77].state[1],molarConservationLaw[76].state[1],molarConservationLaw[75].state[1],molarConservationLaw[74].state[1],molarConservationLaw[73].state[1],molarConservationLaw[72].state[1],molarConservationLaw[71].state[1],molarConservationLaw[70].state[1],molarConservationLaw[69].state[1],molarConservationLaw[68].state[1],molarConservationLaw[67].state[1],molarConservationLaw[66].state[1],molarConservationLaw[65].state[1],molarConservationLaw[64].state[1],molarConservationLaw[63].state[1],molarConservationLaw[62].state[1],molarConservationLaw[61].state[1],molarConservationLaw[60].state[1],molarConservationLaw[59].state[1],molarConservationLaw[58].state[1],molarConservationLaw[57].state[1],molarConservationLaw[56].state[1],molarConservationLaw[55].state[1],molarConservationLaw[54].state[1],molarConservationLaw[53].state[1],molarConservationLaw[52].state[1],molarConservationLaw[51].state[1],molarConservationLaw[50].state[1],molarConservationLaw[49].state[1],molarConservationLaw[48].state[1],molarConservationLaw[47].state[1],molarConservationLaw[46].state[1],molarConservationLaw[45].state[1],molarConservationLaw[44].state[1],molarConservationLaw[43].state[1],molarConservationLaw[42].state[1],molarConservationLaw[41].state[1],molarConservationLaw[40].state[1],molarConservationLaw[39].state[1],molarConservationLaw[38].state[1],molarConservationLaw[37].state[1],molarConservationLaw[36].state[1],molarConservationLaw[35].state[1],molarConservationLaw[34].state[1],molarConservationLaw[33].state[1],molarConservationLaw[32].state[1],molarConservationLaw[31].state[1],molarConservationLaw[30].state[1],molarConservationLaw[29].state[1],molarConservationLaw[28].state[1],molarConservationLaw[27].state[1],molarConservationLaw[26].state[1],molarConservationLaw[25].state[1],molarConservationLaw[24].state[1],molarConservationLaw[23].state[1],molarConservationLaw[22].state[1],molarConservationLaw[21].state[1],molarConservationLaw[20].state[1],molarConservationLaw[19].state[1],molarConservationLaw[18].state[1],molarConservationLaw[17].state[1],molarConservationLaw[16].state[1],molarConservationLaw[15].state[1],molarConservationLaw[14].state[1],molarConservationLaw[13].state[1],molarConservationLaw[12].state[1],molarConservationLaw[11].state[1],molarConservationLaw[10].state[1],molarConservationLaw[9].state[1],molarConservationLaw[8].state[1],molarConservationLaw[7].state[1],molarConservationLaw[6].state[1],molarConservationLaw[5].state[1],molarConservationLaw[4].state[1],molarConservationLaw[3].state[1],molarConservationLaw[2].state[1],molarConservationLaw[1].state[1]) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (661): * Single equations (assignments): 660 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 1 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 0 systems * Non-linear torn systems (#iteration vars, #inner vars): 1 system {(437,436)} Notification: Performance of Backend phase and start with SimCode phase: time 0.003703/5.837, allocations: 0.7339 MB / 1.895 GB, free: 145.2 MB / 0.6046 GB Notification: Performance of simCode: created initialization part: time 0.05689/5.894, allocations: 25.32 MB / 1.92 GB, free: 141.7 MB / 0.6046 GB Notification: Performance of simCode: created event and clocks part: time 0.002168/5.896, allocations: 0.7652 MB / 1.92 GB, free: 141.6 MB / 0.6046 GB Notification: Performance of simCode: created simulation system equations: time 0.03571/5.932, allocations: 13.51 MB / 1.934 GB, free: 138.6 MB / 0.6046 GB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.08316/6.015, allocations: 11.84 MB / 1.945 GB, free: 131.5 MB / 0.6046 GB Error: Error parsing unit kcal: Unit not found Error: Error parsing unit meq: Unit not found Error: Error parsing unit kcal/min: Unit not found Error: Error parsing unit kcal/mol: Unit not found Error: Error parsing unit %: Parse error Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.1281/6.143, allocations: 89.68 MB / 2.033 GB, free: 44 MB / 0.6046 GB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.01829/6.161, allocations: 10.38 MB / 2.043 GB, free: 33.57 MB / 0.6046 GB Notification: Performance of simCode: alias equations: time 0.01519/6.176, allocations: 4.8 MB / 2.048 GB, free: 29.47 MB / 0.6046 GB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.02109/6.198, allocations: 8.179 MB / 2.056 GB, free: 21.24 MB / 0.6046 GB Notification: Performance of SimCode: time 1.733e-06/6.198, allocations: 0 / 2.056 GB, free: 21.24 MB / 0.6046 GB Notification: Performance of Templates: time 2.205/8.403, allocations: 1.093 GB / 3.148 GB, free: 80.87 MB / 0.6515 GB " [Timeout remaining time 652] make -j1 -f Bodylight_Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.makefile [Timeout 660] (rm -f Bodylight_Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.pipe ; mkfifo Bodylight_Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.pipe ; head -c 1048576 < Bodylight_Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.pipe >> ../files/Bodylight_Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.sim & ./Bodylight_Bodylight.Chemical.Examples.AcidBase.AlbuminTitration -abortSlowSimulation -alarm=240 -lv LOG_STATS > Bodylight_Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.pipe 2>&1) [Timeout 240] [Calling sys.exit(0), Time elapsed: 47.88587603298947]