Environment - simulationEnvironment: startTime=0 stopTime=15000 tolerance=1e-06 numberOfIntervals=2500 stepSize=6 Regular simulation: ./Chemical_Chemical.Examples.Hemoglobin.HemoglobinMultipleAllosteryCO -abortSlowSimulation -alarm=480 -lv LOG_STATS LOG_ASSERT | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1-master/package.mo:4752:5-4753:37:writable] | | | | The following assertion has been violated at time 0.000000 | | | | ((solution.mass >= 0.0 and solution.mass <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= solution.mass <= 0.0, has value: 1.00022" LOG_ASSERT | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1-master/package.mo:383:7-385:72:writable] | | | | The following assertion has been violated at time 0.000000 | | | | ((H2O.SelfClustering_K >= 0.0 and H2O.SelfClustering_K <= 1.0)) --> "Variable violating min/max constraint: 0.0 <= H2O.SelfClustering_K <= 1.0, has value: 53.6279" LOG_ASSERT | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1-master/package.mo:4563:5-4564:124:writable] | | | | The following assertion has been violated at time 0.000000 | | | | ((relaxed.speciation.subunitSolution.nj >= 0.0)) --> "Variable violating min constraint: 0.0 <= relaxed.speciation.subunitSolution.nj, has value: -5.79377e-07" LOG_ASSERT | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1-master/package.mo:4568:5-4569:122:writable] | | | | The following assertion has been violated at time 0.000000 | | | | ((relaxed.solution.mj >= 0.0 and relaxed.solution.mj <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= relaxed.solution.mj <= 0.0, has value: 1.04376e-08" LOG_ASSERT | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1-master/package.mo:4563:5-4564:124:writable] | | | | The following assertion has been violated at time 0.000000 | | | | ((tensed.speciation.subunitSolution.nj >= 0.0)) --> "Variable violating min constraint: 0.0 <= tensed.speciation.subunitSolution.nj, has value: -0.0119994" LOG_ASSERT | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1-master/package.mo:4568:5-4569:122:writable] | | | | The following assertion has been violated at time 0.000000 | | | | ((tensed.solution.mj >= 0.0 and tensed.solution.mj <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= tensed.solution.mj <= 0.0, has value: 0.000216173" LOG_ASSERT | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1-master/package.mo:4562:5-4562:67:writable] | | | | The following assertion has been violated at time 0.000000 | | | | ((CO_free.solution.n >= 0.0 and CO_free.solution.n <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= CO_free.solution.n <= 0.0, has value: 1.01812" LOG_SUCCESS | info | The initialization finished successfully without homotopy method. LOG_STATS | info | ### STATISTICS ### | | | | | timer | | | | | | 0.0801337s reading init.xml | | | | | | 0.00443815s reading info.xml | | | | | | 0.000595667s [ 0.1%] pre-initialization | | | | | | 0.00106857s [ 0.2%] initialization | | | | | | 8.6963e-05s [ 0.0%] steps | | | | | | 0.0361782s [ 5.3%] solver (excl. callbacks) | | | | | | 0s [ 0.0%] creating output-file | | | | | | 0.100673s [ 14.9%] event-handling | | | | | | 0.0439392s [ 6.5%] overhead | | | | | | 0.494566s [ 73.0%] simulation | | | | | | 0.677108s [100.0%] total | | | | | events | | | | | | 54 state events | | | | | | 0 time events | | | | | solver: dassl | | | | | | 1187 steps taken | | | | | | 1811 calls of functionODE | | | | | | 376 evaluations of jacobian | | | | | | 19 error test failures | | | | | | 0 convergence test failures | | | | | | 0.121671s time of jacobian evaluation LOG_SUCCESS | info | The simulation finished successfully.