Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo", uses=false) Using package BioChem with version 1.1.2 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo) Using package Modelica with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo) Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo) Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo) Running command: translateModel(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel,tolerance=1e-06,outputFormat="empty",numberOfIntervals=-2,variableFilter="",fileNamePrefix="BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel") translateModel(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel,tolerance=1e-06,outputFormat="empty",numberOfIntervals=-2,variableFilter="",fileNamePrefix="BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel") Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.005829/0.005829, allocations: 103.8 kB / 15.73 MB, free: 6.051 MB / 14.72 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.001255/0.001255, allocations: 196.2 kB / 16.68 MB, free: 5.961 MB / 14.72 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo): time 1.508/1.508, allocations: 222.9 MB / 240.4 MB, free: 15.17 MB / 206.1 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo): time 0.06369/0.06369, allocations: 12.28 MB / 302.8 MB, free: 3.227 MB / 238.1 MB Warning: Ignoring unknown experiment annotation option: Algorithm = "dassl" Notification: Performance of FrontEnd - loaded program: time 0.001411/0.001411, allocations: 61.31 kB / 419.2 MB, free: 17.86 MB / 302.1 MB Notification: Performance of FrontEnd - Absyn->SCode: time 0.1056/0.107, allocations: 52.08 MB / 471.3 MB, free: 13.79 MB / 350.1 MB Notification: Performance of NFInst.instantiate(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel): time 0.01212/0.1192, allocations: 8.72 MB / 480 MB, free: 5.035 MB / 350.1 MB Notification: Performance of NFInst.instExpressions: time 0.00747/0.1267, allocations: 2.375 MB / 482.4 MB, free: 2.652 MB / 350.1 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.002797/0.1296, allocations: 116 kB / 482.5 MB, free: 2.539 MB / 350.1 MB Notification: Performance of NFTyping.typeComponents: time 0.001873/0.1315, allocations: 377 kB / 482.9 MB, free: 2.168 MB / 350.1 MB Notification: Performance of NFTyping.typeBindings: time 0.003004/0.1345, allocations: 0.5262 MB / 483.4 MB, free: 1.637 MB / 350.1 MB Notification: Performance of NFTyping.typeClassSections: time 0.002096/0.1367, allocations: 0.5697 MB / 484 MB, free: 1.066 MB / 350.1 MB Notification: Performance of NFFlatten.flatten: time 0.003785/0.1405, allocations: 2.34 MB / 486.3 MB, free: 14.72 MB / 366.1 MB Notification: Performance of NFFlatten.resolveConnections: time 0.001793/0.1423, allocations: 1.28 MB / 487.6 MB, free: 13.39 MB / 366.1 MB Notification: Performance of NFEvalConstants.evaluate: time 0.0014/0.1437, allocations: 0.9501 MB / 488.5 MB, free: 12.43 MB / 366.1 MB Notification: Performance of NFSimplifyModel.simplify: time 0.001113/0.1448, allocations: 1.085 MB / 489.6 MB, free: 11.34 MB / 366.1 MB Notification: Performance of NFPackage.collectConstants: time 0.0003695/0.1452, allocations: 320 kB / 489.9 MB, free: 11.03 MB / 366.1 MB Notification: Performance of NFFlatten.collectFunctions: time 0.0003865/0.1456, allocations: 320 kB / 490.2 MB, free: 10.72 MB / 366.1 MB Notification: Performance of NFScalarize.scalarize: time 0.0004239/0.146, allocations: 0.5765 MB / 490.8 MB, free: 10.14 MB / 366.1 MB Notification: Performance of NFVerifyModel.verify: time 0.001169/0.1472, allocations: 1.256 MB / 492.1 MB, free: 8.879 MB / 366.1 MB Notification: Performance of NFConvertDAE.convert: time 0.003362/0.1506, allocations: 3.43 MB / 495.5 MB, free: 5.438 MB / 366.1 MB Notification: Performance of FrontEnd - DAE generated: time 7.955e-06/0.1506, allocations: 0 / 495.5 MB, free: 5.438 MB / 366.1 MB Notification: Performance of FrontEnd: time 2.975e-06/0.1506, allocations: 0 / 495.5 MB, free: 5.438 MB / 366.1 MB Notification: Performance of Transformations before backend: time 7.691e-05/0.1507, allocations: 4 kB / 495.5 MB, free: 5.434 MB / 366.1 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 687 * Number of variables: 687 Notification: Performance of Generate backend data structure: time 0.004544/0.1552, allocations: 2.349 MB / 497.9 MB, free: 3.027 MB / 366.1 MB Notification: Performance of prepare preOptimizeDAE: time 4.493e-05/0.1553, allocations: 8.031 kB / 497.9 MB, free: 3.02 MB / 366.1 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0003637/0.1557, allocations: 238.1 kB / 498.1 MB, free: 2.785 MB / 366.1 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.0004973/0.1562, allocations: 413.2 kB / 498.5 MB, free: 2.344 MB / 366.1 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0002811/0.1565, allocations: 257.4 kB / 498.8 MB, free: 2.078 MB / 366.1 MB Notification: Performance of preOpt expandDerOperator (simulation): time 0.000332/0.1568, allocations: 280.2 kB / 499 MB, free: 1.805 MB / 366.1 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.004032/0.1608, allocations: 2.397 MB / 0.4897 GB, free: 15.32 MB / 382.1 MB Notification: Performance of preOpt findStateOrder (simulation): time 7.463e-05/0.1609, allocations: 11.84 kB / 0.4897 GB, free: 15.3 MB / 382.1 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001852/0.1611, allocations: 112 kB / 0.4898 GB, free: 15.2 MB / 382.1 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 4.841e-05/0.1612, allocations: 64 kB / 0.4899 GB, free: 15.13 MB / 382.1 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.002987/0.1642, allocations: 1.675 MB / 0.4915 GB, free: 13.45 MB / 382.1 MB Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts. Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.01172/0.1759, allocations: 8.36 MB / 0.4997 GB, free: 4.777 MB / 382.1 MB Notification: Performance of preOpt comSubExp (simulation): time 0.002095/0.178, allocations: 1.586 MB / 0.5012 GB, free: 3.066 MB / 382.1 MB Notification: Performance of preOpt resolveLoops (simulation): time 0.0008446/0.1789, allocations: 0.5378 MB / 0.5017 GB, free: 2.516 MB / 382.1 MB Notification: Performance of preOpt evalFunc (simulation): time 6.537e-05/0.179, allocations: 25.31 kB / 0.5018 GB, free: 2.488 MB / 382.1 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 3.724e-05/0.179, allocations: 51.81 kB / 0.5018 GB, free: 2.43 MB / 382.1 MB Notification: Performance of pre-optimization done (n=139): time 3.627e-06/0.179, allocations: 0 / 0.5018 GB, free: 2.43 MB / 382.1 MB Notification: Performance of matching and sorting (n=171): time 0.3628/0.5418, allocations: 9.118 MB / 0.5107 GB, free: 37.15 MB / 382.1 MB Notification: Performance of inlineWhenForInitialization (initialization): time 0.00012/0.542, allocations: 182 kB / 0.5109 GB, free: 36.95 MB / 382.1 MB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0009203/0.5429, allocations: 482.4 kB / 0.5113 GB, free: 36.71 MB / 382.1 MB Notification: Performance of collectPreVariables (initialization): time 0.0001033/0.543, allocations: 55.52 kB / 0.5114 GB, free: 36.66 MB / 382.1 MB Notification: Performance of collectInitialEqns (initialization): time 0.000639/0.5437, allocations: 0.9499 MB / 0.5123 GB, free: 35.94 MB / 382.1 MB Notification: Performance of collectInitialBindings (initialization): time 0.0005583/0.5443, allocations: 0.6303 MB / 0.5129 GB, free: 35.45 MB / 382.1 MB Notification: Performance of simplifyInitialFunctions (initialization): time 0.0006862/0.545, allocations: 349.2 kB / 0.5133 GB, free: 35.27 MB / 382.1 MB Notification: Performance of setup shared object (initialization): time 0.0001133/0.5451, allocations: 327.1 kB / 0.5136 GB, free: 34.95 MB / 382.1 MB Notification: Performance of preBalanceInitialSystem (initialization): time 0.001637/0.5467, allocations: 0.6679 MB / 0.5142 GB, free: 34.68 MB / 382.1 MB Notification: Performance of partitionIndependentBlocks (initialization): time 0.002359/0.5491, allocations: 1.179 MB / 0.5154 GB, free: 33.7 MB / 382.1 MB Notification: Performance of analyzeInitialSystem (initialization): time 0.02361/0.5727, allocations: 4.731 MB / 0.52 GB, free: 31.67 MB / 382.1 MB Notification: Performance of solveInitialSystemEqSystem (initialization): time 2.247e-05/0.5728, allocations: 9.266 kB / 0.52 GB, free: 31.67 MB / 382.1 MB Notification: Performance of matching and sorting (n=291) (initialization): time 0.004781/0.5776, allocations: 2.113 MB / 0.5221 GB, free: 30.75 MB / 382.1 MB Notification: Performance of prepare postOptimizeDAE: time 4.467e-05/0.5777, allocations: 12.88 kB / 0.5221 GB, free: 30.75 MB / 382.1 MB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 3.154e-05/0.5777, allocations: 19.81 kB / 0.5221 GB, free: 30.75 MB / 382.1 MB Notification: Performance of postOpt tearingSystem (initialization): time 5.562e-05/0.5778, allocations: 31.62 kB / 0.5221 GB, free: 30.75 MB / 382.1 MB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.002618/0.5804, allocations: 0.6434 MB / 0.5228 GB, free: 30.7 MB / 382.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 5.453e-05/0.5805, allocations: 46.58 kB / 0.5228 GB, free: 30.68 MB / 382.1 MB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.001009/0.5815, allocations: 86.36 kB / 0.5229 GB, free: 30.64 MB / 382.1 MB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0001431/0.5816, allocations: 92.41 kB / 0.523 GB, free: 30.62 MB / 382.1 MB Warning: Assuming fixed start value for the following 41 variables: V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real adiposeTissue1.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real GlucoseRenalExcretion.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real GlucoseRenalExcretion.E.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real UtilizationMuscleTissue.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real UtilizationMuscleTissue.U_idm.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real GastroIntestinalTract.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real GastroIntestinalTract.GlucoseIntake.c:VARIABLE(min = 0.0 start = 78000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real TissueGlucose.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real PlasmaGlucose.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real PlasmaInsulin.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real LiverInsulin.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real EndogenousGlucoseProduction.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real EndogenousGlucoseProduction.I_po.c:VARIABLE(min = 0.0 start = 3.6 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real BetaCell.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real BetaCell.Y.c:VARIABLE(min = 0.0 start = 0.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real adiposeTissue1.adipocyte1.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real adiposeTissue1.adipocyte1.IR.c:VARIABLE(min = 0.0 start = 2.34e12 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real adiposeTissue1.adipocyte1.IRS1.c:VARIABLE(min = 0.0 start = 1.61e10 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real adiposeTissue1.adipocyte1.PKB.c:VARIABLE(min = 0.0 start = 1.68e7 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real adiposeTissue1.adipocyte1.GLUT4_CYTOSOL.c:VARIABLE(min = 0.0 start = 5.8e8 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real adiposeTissue1.adipocyte1.IR_insulin.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real adiposeTissue1.adipocyte1.GLUT4_MEMBRANE.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real adiposeTissue1.adipocyte1.GlucoseUtilization.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real adiposeTissue1.adipocyte1.PKB_P.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real adiposeTissue1.adipocyte1.IRS1_P.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real BetaCell.G_p.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real EndogenousGlucoseProduction.End.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real EndogenousGlucoseProduction.I_d.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real EndogenousGlucoseProduction.I_1.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real LiverInsulin.Deg.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real LiverInsulin.I_l.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real UtilizationMuscleTissue.UtilizationReaction.X:VARIABLE(min = 0.0 unit = "mol/l" fixed = true ) type: Real PlasmaInsulin.Deg.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real PlasmaInsulin.I_p.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real PlasmaGlucose.U_ii.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real TissueGlucose.G_t.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real GastroIntestinalTract.End.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real GastroIntestinalTract.Q_sto1.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real GastroIntestinalTract.Q_gut.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real GastroIntestinalTract.Q_sto2.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 86 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (291): * Single equations (assignments): 291 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of prepare postOptimizeDAE: time 0.001269/0.5829, allocations: 0.6046 MB / 0.5236 GB, free: 30.23 MB / 382.1 MB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0002577/0.5832, allocations: 94.31 kB / 0.5237 GB, free: 30.18 MB / 382.1 MB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.002217/0.5854, allocations: 1.434 MB / 0.5251 GB, free: 29.54 MB / 382.1 MB Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.413e-05/0.5854, allocations: 15.88 kB / 0.5251 GB, free: 29.54 MB / 382.1 MB Notification: Performance of postOpt constantLinearSystem (simulation): time 1.127e-05/0.5854, allocations: 3.969 kB / 0.5251 GB, free: 29.54 MB / 382.1 MB Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.606e-05/0.5855, allocations: 7.594 kB / 0.5251 GB, free: 29.54 MB / 382.1 MB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.005599/0.5911, allocations: 3.585 MB / 0.5286 GB, free: 27.92 MB / 382.1 MB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 6.112e-06/0.5911, allocations: 0 / 0.5286 GB, free: 27.92 MB / 382.1 MB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.002338/0.5934, allocations: 478.5 kB / 0.529 GB, free: 27.82 MB / 382.1 MB Notification: Performance of postOpt tearingSystem (simulation): time 1.435e-05/0.5935, allocations: 11.91 kB / 0.5291 GB, free: 27.82 MB / 382.1 MB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0001143/0.5936, allocations: 55.84 kB / 0.5291 GB, free: 27.78 MB / 382.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 1.179e-05/0.5936, allocations: 15.83 kB / 0.5291 GB, free: 27.77 MB / 382.1 MB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 4.378e-06/0.5936, allocations: 3.938 kB / 0.5291 GB, free: 27.77 MB / 382.1 MB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.003177/0.5968, allocations: 2.505 MB / 0.5316 GB, free: 26.29 MB / 382.1 MB Notification: Performance of postOpt removeConstants (simulation): time 0.0002059/0.597, allocations: 150 kB / 0.5317 GB, free: 26.15 MB / 382.1 MB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001471/0.5972, allocations: 54.5 kB / 0.5318 GB, free: 26.11 MB / 382.1 MB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0007244/0.5979, allocations: 39.11 kB / 0.5318 GB, free: 26.09 MB / 382.1 MB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0001763/0.5981, allocations: 112.8 kB / 0.5319 GB, free: 26.03 MB / 382.1 MB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 7.39e-05/0.5982, allocations: 48.84 kB / 0.532 GB, free: 26.01 MB / 382.1 MB Notification: Performance of sorting global known variables: time 0.0003082/0.5985, allocations: 301.3 kB / 0.5323 GB, free: 25.82 MB / 382.1 MB Notification: Performance of sort global known variables: time 1.102e-06/0.5985, allocations: 0 / 0.5323 GB, free: 25.82 MB / 382.1 MB Notification: Performance of remove unused functions: time 0.001686/0.6002, allocations: 426.7 kB / 0.5327 GB, free: 25.71 MB / 382.1 MB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 7 * Number of states: 41 (GastroIntestinalTract.V,GastroIntestinalTract.Q_sto2.n,GastroIntestinalTract.Q_gut.n,GastroIntestinalTract.Q_sto1.n,GastroIntestinalTract.GlucoseIntake.c,GastroIntestinalTract.End.n,TissueGlucose.V,TissueGlucose.G_t.n,PlasmaGlucose.V,PlasmaGlucose.U_ii.n,PlasmaInsulin.V,PlasmaInsulin.I_p.n,PlasmaInsulin.Deg.n,UtilizationMuscleTissue.UtilizationReaction.X,LiverInsulin.V,LiverInsulin.I_l.n,LiverInsulin.Deg.n,EndogenousGlucoseProduction.V,EndogenousGlucoseProduction.I_1.n,EndogenousGlucoseProduction.I_d.n,EndogenousGlucoseProduction.End.n,EndogenousGlucoseProduction.I_po.c,BetaCell.V,BetaCell.G_p.n,BetaCell.Y.c,adiposeTissue1.adipocyte1.V,adiposeTissue1.adipocyte1.IR.c,adiposeTissue1.adipocyte1.IRS1.c,adiposeTissue1.adipocyte1.IRS1_P.n,adiposeTissue1.adipocyte1.PKB.c,adiposeTissue1.adipocyte1.PKB_P.n,adiposeTissue1.adipocyte1.GlucoseUtilization.n,adiposeTissue1.adipocyte1.GLUT4_MEMBRANE.n,adiposeTissue1.adipocyte1.GLUT4_CYTOSOL.c,adiposeTissue1.adipocyte1.IR_insulin.n,V,adiposeTissue1.V,UtilizationMuscleTissue.V,UtilizationMuscleTissue.U_idm.n,GlucoseRenalExcretion.V,GlucoseRenalExcretion.E.n) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (173): * Single equations (assignments): 173 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of Backend phase and start with SimCode phase: time 0.0001943/0.6004, allocations: 160.8 kB / 0.5328 GB, free: 25.55 MB / 382.1 MB Notification: Performance of simCode: created initialization part: time 0.002485/0.6029, allocations: 1.654 MB / 0.5344 GB, free: 23.9 MB / 382.1 MB Notification: Performance of simCode: created event and clocks part: time 5.26e-06/0.6029, allocations: 0 / 0.5344 GB, free: 23.9 MB / 382.1 MB Notification: Performance of simCode: created simulation system equations: time 0.0009589/0.6038, allocations: 0.7579 MB / 0.5352 GB, free: 23.14 MB / 382.1 MB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.001106/0.605, allocations: 219.3 kB / 0.5354 GB, free: 22.95 MB / 382.1 MB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.008097/0.6131, allocations: 4.86 MB / 0.5401 GB, free: 18.07 MB / 382.1 MB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0007673/0.6139, allocations: 1.366 MB / 0.5415 GB, free: 16.67 MB / 382.1 MB Notification: Performance of simCode: alias equations: time 0.0009055/0.6148, allocations: 165.5 kB / 0.5416 GB, free: 16.5 MB / 382.1 MB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0003194/0.6151, allocations: 107.4 kB / 0.5417 GB, free: 16.4 MB / 382.1 MB Notification: Performance of SimCode: time 1.112e-06/0.6151, allocations: 0 / 0.5417 GB, free: 16.4 MB / 382.1 MB Notification: Performance of Templates: time 0.02275/0.6379, allocations: 16.51 MB / 0.5578 GB, free: 64 kB / 382.1 MB make -j1 -f BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.makefile (rm -f BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe ; mkfifo BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe ; head -c 1048576 < BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe >> ../files/BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.sim & ./BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel -abortSlowSimulation -alarm=480 -lv LOG_STATS > BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe 2>&1)