Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001322/0.001322, allocations: 99.75 kB / 18.95 MB, free: 2.832 MB / 14.72 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001439/0.001439, allocations: 216 kB / 22.25 MB, free: 5.102 MB / 14.72 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.378/1.378, allocations: 230.6 MB / 256 MB, free: 7.805 MB / 206.1 MB " [Timeout remaining time 178] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.1298/0.1298, allocations: 23.92 MB / 336.3 MB, free: 10.93 MB / 270.1 MB " [Timeout remaining time 180] Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: "" <> buildModelFMU(Chemical.Obsolete.Examples.Hemoglobin.Joels57,fileNamePrefix="Chemical_master_Chemical_Obsolete_Examples_Hemoglobin_Joels57",fmuType="me",version="2.0",platforms={"static"}) "" <> buildModelFMU(Chemical.Obsolete.Examples.Hemoglobin.Joels57,fileNamePrefix="Chemical_master_Chemical_Obsolete_Examples_Hemoglobin_Joels57",fmuType="me",version="2.0",platforms={"static"}) [Timeout 660] "Notification: Chemical requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Performance of FrontEnd - loaded program: time 0.001934/0.001934, allocations: 71.89 kB / 471.2 MB, free: 7.453 MB / 334.1 MB Notification: Performance of FrontEnd - Absyn->SCode: time 0.3012/0.3032, allocations: 59.87 MB / 0.5186 GB, free: 9.551 MB / 382.1 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14335:7-14335:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14335:7-14335:66:writable] Notification: The diagnostics message for the missing inner is: Your model is using an outer \"system\" component but an inner \"system\" component is not defined. For simulation drag Modelica.Fluid.System into your model to specify system properties. Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.Joels57): time 0.1182/0.4214, allocations: 74.28 MB / 0.5911 GB, free: 15.47 MB / 446.1 MB Notification: Performance of NFInst.instExpressions: time 0.5095/0.9309, allocations: 191.2 MB / 0.7779 GB, free: 16.15 MB / 0.5606 GB Notification: Performance of NFInst.updateImplicitVariability: time 0.01306/0.9439, allocations: 229.5 kB / 0.7781 GB, free: 16.15 MB / 0.5606 GB Notification: Performance of NFTyping.typeComponents: time 0.01259/0.9565, allocations: 4.454 MB / 0.7825 GB, free: 16.12 MB / 0.5606 GB Notification: Performance of NFTyping.typeBindings: time 0.04623/1.003, allocations: 17.86 MB / 0.7999 GB, free: 15.57 MB / 0.5606 GB Notification: Performance of NFTyping.typeClassSections: time 0.07156/1.074, allocations: 32.66 MB / 0.8318 GB, free: 15.98 MB / 0.5762 GB Notification: Performance of NFFlatten.flatten: time 0.09396/1.168, allocations: 89.11 MB / 0.9188 GB, free: 2.148 MB / 0.6387 GB Notification: Performance of NFFlatten.resolveConnections: time 0.08122/1.249, allocations: 52.29 MB / 0.9699 GB, free: 15.73 MB / 0.7012 GB Notification: Performance of NFEvalConstants.evaluate: time 0.7031/1.953, allocations: 56.57 MB / 1.025 GB, free: 43.89 MB / 0.7169 GB Notification: Performance of NFSimplifyModel.simplify: time 0.09433/2.047, allocations: 52.04 MB / 1.076 GB, free: 41.05 MB / 0.7169 GB Notification: Performance of NFPackage.collectConstants: time 0.03505/2.082, allocations: 12.2 MB / 1.088 GB, free: 41.05 MB / 0.7169 GB Notification: Performance of NFFlatten.collectFunctions: time 0.09148/2.173, allocations: 34.5 MB / 1.122 GB, free: 32.59 MB / 0.7169 GB Notification: Performance of NFScalarize.scalarize: time 0.04125/2.215, allocations: 24.03 MB / 1.145 GB, free: 13.04 MB / 0.7169 GB Notification: Performance of NFVerifyModel.verify: time 0.1099/2.325, allocations: 39.06 MB / 1.183 GB, free: 12.86 MB / 0.7325 GB Notification: Performance of NFConvertDAE.convert: time 0.9157/3.24, allocations: 159.6 MB / 1.339 GB, free: 108.2 MB / 0.842 GB Notification: Performance of FrontEnd - DAE generated: time 6.923e-06/3.24, allocations: 0 / 1.339 GB, free: 108.2 MB / 0.842 GB Notification: Performance of FrontEnd: time 1.423e-06/3.24, allocations: 0.9688 kB / 1.339 GB, free: 108.2 MB / 0.842 GB Notification: Performance of Transformations before backend: time 0.002794/3.243, allocations: 1.156 kB / 1.339 GB, free: 108.2 MB / 0.842 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 11424 * Number of variables: 11424 Notification: Performance of Generate backend data structure: time 0.2561/3.499, allocations: 71.67 MB / 1.409 GB, free: 87.82 MB / 0.842 GB Notification: Performance of prepare preOptimizeDAE: time 4.821e-05/3.499, allocations: 11.62 kB / 1.409 GB, free: 87.82 MB / 0.842 GB Notification: Performance of preOpt introduceOutputAliases (simulation): time 0.03502/3.534, allocations: 5.951 MB / 1.415 GB, free: 87.49 MB / 0.842 GB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.08388/3.618, allocations: 11.94 MB / 1.427 GB, free: 84.44 MB / 0.842 GB Notification: Performance of preOpt evaluateParameters (simulation): time 0.1108/3.729, allocations: 42.63 MB / 1.468 GB, free: 73.26 MB / 0.842 GB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.005811/3.735, allocations: 9.237 MB / 1.477 GB, free: 64.75 MB / 0.842 GB Notification: Performance of preOpt expandDerOperator (simulation): time 0.03659/3.771, allocations: 4.596 MB / 1.482 GB, free: 62.2 MB / 0.842 GB Notification: Performance of preOpt clockPartitioning (simulation): time 0.2841/4.055, allocations: 112.9 MB / 1.592 GB, free: 12.63 MB / 0.9045 GB Notification: Performance of preOpt findStateOrder (simulation): time 0.002273/4.058, allocations: 29.06 kB / 1.592 GB, free: 12.62 MB / 0.9045 GB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.03448/4.092, allocations: 1.758 MB / 1.594 GB, free: 10.86 MB / 0.9045 GB Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.001061/4.093, allocations: 1.059 MB / 1.595 GB, free: 9.805 MB / 0.9045 GB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.6313/4.724, allocations: 153 MB / 1.744 GB, free: 352.2 MB / 0.9514 GB Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts. Notification: Performance of preOpt removeSimpleEquations (simulation): time 1.27/5.994, allocations: 394.7 MB / 2.13 GB, free: 321.1 MB / 0.9514 GB Notification: Performance of preOpt comSubExp (simulation): time 2.087/8.081, allocations: 0.6474 GB / 2.777 GB, free: 252.8 MB / 0.9514 GB Notification: Performance of preOpt resolveLoops (simulation): time 0.09581/8.177, allocations: 60.06 MB / 2.836 GB, free: 199 MB / 0.9514 GB Notification: Performance of preOpt evalFunc (simulation): time 0.8666/9.043, allocations: 254.8 MB / 3.085 GB, free: 318.4 MB / 0.9514 GB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.000412/9.044, allocations: 340.4 kB / 3.085 GB, free: 318.3 MB / 0.9514 GB Notification: Performance of preOpt simplifyInStream (simulation): time 0.101/9.145, allocations: 29.34 MB / 3.113 GB, free: 314.7 MB / 0.9514 GB Notification: Performance of pre-optimization done (n=2985): time 0.0002399/9.145, allocations: 0 / 3.113 GB, free: 314.7 MB / 0.9514 GB Notification: Performance of matching and sorting (n=3387): time 2.43/11.57, allocations: 423.8 MB / 3.527 GB, free: 315.1 MB / 0.9514 GB Notification: Performance of inlineWhenForInitialization (initialization): time 0.0002392/11.57, allocations: 450.5 kB / 3.528 GB, free: 314.9 MB / 0.9514 GB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.05344/11.63, allocations: 33.03 MB / 3.56 GB, free: 303.7 MB / 0.9514 GB Notification: Performance of collectPreVariables (initialization): time 0.01293/11.64, allocations: 0.578 MB / 3.561 GB, free: 303.2 MB / 0.9514 GB Notification: Performance of collectInitialEqns (initialization): time 0.01701/11.66, allocations: 21.73 MB / 3.582 GB, free: 290.6 MB / 0.9514 GB Notification: Performance of collectInitialBindings (initialization): time 0.02443/11.68, allocations: 12.41 MB / 3.594 GB, free: 280.9 MB / 0.9514 GB Notification: Performance of simplifyInitialFunctions (initialization): time 0.04654/11.73, allocations: 9.928 MB / 3.604 GB, free: 277.2 MB / 0.9514 GB Notification: Performance of setup shared object (initialization): time 4.546e-05/11.73, allocations: 304.4 kB / 3.604 GB, free: 276.9 MB / 0.9514 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.06099/11.79, allocations: 39.04 MB / 3.642 GB, free: 258.7 MB / 0.9514 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.06913/11.86, allocations: 53.24 MB / 3.694 GB, free: 215.3 MB / 0.9514 GB Notification: Performance of analyzeInitialSystem (initialization): time 0.1275/11.99, allocations: 96.37 MB / 3.788 GB, free: 112.4 MB / 0.9514 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0004539/11.99, allocations: 128 kB / 3.788 GB, free: 112.3 MB / 0.9514 GB Notification: Performance of matching and sorting (n=5667) (initialization): time 1.674/13.66, allocations: 257.3 MB / 4.04 GB, free: 240.4 MB / 0.9514 GB Notification: Performance of prepare postOptimizeDAE: time 0.0003262/13.66, allocations: 193.8 kB / 4.04 GB, free: 240.4 MB / 0.9514 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0007243/13.66, allocations: 447.2 kB / 4.04 GB, free: 240.4 MB / 0.9514 GB Notification: Performance of postOpt tearingSystem (initialization): time 0.1769/13.84, allocations: 73.7 MB / 4.112 GB, free: 192.6 MB / 0.9514 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.04987/13.89, allocations: 11.18 MB / 4.123 GB, free: 182.2 MB / 0.9514 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.9289/14.82, allocations: 309.8 MB / 4.426 GB, free: 229.8 MB / 0.9514 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.05528/14.87, allocations: 2.484 MB / 4.428 GB, free: 229.1 MB / 0.9514 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.01789/14.89, allocations: 2.802 MB / 4.431 GB, free: 228.8 MB / 0.9514 GB Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 2031 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (5523): * Single equations (assignments): 5514 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 9 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 6 systems {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)} * Non-linear torn systems (#iteration vars, #inner vars): 3 systems {(1,3), (1,3), (1,3)} Notification: Performance of prepare postOptimizeDAE: time 0.0512/14.94, allocations: 18.33 MB / 4.449 GB, free: 221 MB / 0.9514 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.02041/14.96, allocations: 3.32 MB / 4.452 GB, free: 221 MB / 0.9514 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.8225/15.78, allocations: 152.5 MB / 4.601 GB, free: 108 MB / 0.9514 GB Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.000451/15.79, allocations: 356 kB / 4.601 GB, free: 107.6 MB / 0.9514 GB Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0005362/15.79, allocations: 56 kB / 4.601 GB, free: 107.6 MB / 0.9514 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.001115/15.79, allocations: 185.8 kB / 4.601 GB, free: 107.4 MB / 0.9514 GB Notification: Performance of postOpt removeSimpleEquations (simulation): time 1.277/17.06, allocations: 228.7 MB / 4.825 GB, free: 238.3 MB / 0.9514 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0002779/17.06, allocations: 7.094 kB / 4.825 GB, free: 238.3 MB / 0.9514 GB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.04111/17.11, allocations: 7.253 MB / 4.832 GB, free: 237.7 MB / 0.9514 GB Notification: Performance of postOpt tearingSystem (simulation): time 0.09584/17.2, allocations: 39.74 MB / 4.871 GB, free: 229 MB / 0.9514 GB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.01131/17.21, allocations: 1.444 MB / 4.872 GB, free: 228.4 MB / 0.9514 GB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.3239/17.54, allocations: 155.8 MB / 5.024 GB, free: 90.98 MB / 0.9514 GB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 7.985e-06/17.54, allocations: 19.94 kB / 5.024 GB, free: 90.96 MB / 0.9514 GB Notification: Performance of postOpt symbolicJacobian (simulation): time 1.234/18.77, allocations: 200.4 MB / 5.22 GB, free: 226.8 MB / 0.9514 GB Notification: Performance of postOpt removeConstants (simulation): time 0.03581/18.81, allocations: 11.56 MB / 5.231 GB, free: 223 MB / 0.9514 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.01621/18.82, allocations: 0.9112 MB / 5.232 GB, free: 222.4 MB / 0.9514 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.03918/18.86, allocations: 1.55 MB / 5.234 GB, free: 221.9 MB / 0.9514 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.02134/18.88, allocations: 4.68 MB / 5.238 GB, free: 221.2 MB / 0.9514 GB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.009621/18.89, allocations: 1.387 MB / 5.24 GB, free: 221 MB / 0.9514 GB Notification: Performance of sorting global known variables: time 0.03407/18.93, allocations: 22.46 MB / 5.261 GB, free: 212.8 MB / 0.9514 GB Notification: Performance of sort global known variables: time 1.6e-07/18.93, allocations: 0 / 5.261 GB, free: 212.8 MB / 0.9514 GB Notification: Performance of remove unused functions: time 0.08426/19.01, allocations: 20.25 MB / 5.281 GB, free: 209.7 MB / 0.9514 GB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 45 * Number of states: 180 (pCO2_2000.solution.temperature,pCO2_2000.O2_free.logn,pCO2_2000.H2O.logn,pCO2_2000.relaxed.OxyHm[1].logn,pCO2_2000.relaxed.OxyHm[2].logn,pCO2_2000.relaxed.OxyHm[3].logn,pCO2_2000.relaxed.OxyHm[4].logn,pCO2_2000.relaxed.DeoxyHm[1].logn,pCO2_2000.relaxed.DeoxyHm[2].logn,pCO2_2000.relaxed.DeoxyHm[3].logn,pCO2_2000.relaxed.DeoxyHm[4].logn,pCO2_2000.relaxed.HmAH[1].logn,pCO2_2000.relaxed.HmAH[2].logn,pCO2_2000.relaxed.HmAH[3].logn,pCO2_2000.relaxed.HmAH[4].logn,pCO2_2000.relaxed.HmA[1].logn,pCO2_2000.relaxed.HmA[2].logn,pCO2_2000.relaxed.HmA[3].logn,pCO2_2000.relaxed.HmA[4].logn,pCO2_2000.relaxed.HmNH3[1].logn,pCO2_2000.relaxed.HmNH3[2].logn,pCO2_2000.relaxed.HmNH3[3].logn,pCO2_2000.relaxed.HmNH3[4].logn,pCO2_2000.relaxed.HmNH2[1].logn,pCO2_2000.relaxed.HmNH2[2].logn,pCO2_2000.relaxed.HmNH2[3].logn,pCO2_2000.relaxed.HmNH2[4].logn,pCO2_2000.relaxed.HmNHCOO[1].logn,pCO2_2000.relaxed.HmNHCOO[2].logn,pCO2_2000.relaxed.HmNHCOO[3].logn,pCO2_2000.relaxed.HmNHCOO[4].logn,pCO2_2000.tensed.OxyHm[1].logn,pCO2_2000.tensed.OxyHm[2].logn,pCO2_2000.tensed.OxyHm[3].logn,pCO2_2000.tensed.OxyHm[4].logn,pCO2_2000.tensed.DeoxyHm[1].logn,pCO2_2000.tensed.DeoxyHm[2].logn,pCO2_2000.tensed.DeoxyHm[3].logn,pCO2_2000.tensed.DeoxyHm[4].logn,pCO2_2000.tensed.HmAH[1].logn,pCO2_2000.tensed.HmAH[2].logn,pCO2_2000.tensed.HmAH[3].logn,pCO2_2000.tensed.HmAH[4].logn,pCO2_2000.tensed.HmA[1].logn,pCO2_2000.tensed.HmA[2].logn,pCO2_2000.tensed.HmA[3].logn,pCO2_2000.tensed.HmA[4].logn,pCO2_2000.tensed.HmNH3[1].logn,pCO2_2000.tensed.HmNH3[2].logn,pCO2_2000.tensed.HmNH3[3].logn,pCO2_2000.tensed.HmNH3[4].logn,pCO2_2000.tensed.HmNH2[1].logn,pCO2_2000.tensed.HmNH2[2].logn,pCO2_2000.tensed.HmNH2[3].logn,pCO2_2000.tensed.HmNH2[4].logn,pCO2_2000.tensed.HmNHCOO[1].logn,pCO2_2000.tensed.HmNHCOO[2].logn,pCO2_2000.tensed.HmNHCOO[3].logn,pCO2_2000.tensed.HmNHCOO[4].logn,pCO2_2000.CO2_free.logn,pCO2_5330.solution.temperature,pCO2_5330.O2_free.logn,pCO2_5330.H2O.logn,pCO2_5330.relaxed.OxyHm[1].logn,pCO2_5330.relaxed.OxyHm[2].logn,pCO2_5330.relaxed.OxyHm[3].logn,pCO2_5330.relaxed.OxyHm[4].logn,pCO2_5330.relaxed.DeoxyHm[1].logn,pCO2_5330.relaxed.DeoxyHm[2].logn,pCO2_5330.relaxed.DeoxyHm[3].logn,pCO2_5330.relaxed.DeoxyHm[4].logn,pCO2_5330.relaxed.HmAH[1].logn,pCO2_5330.relaxed.HmAH[2].logn,pCO2_5330.relaxed.HmAH[3].logn,pCO2_5330.relaxed.HmAH[4].logn,pCO2_5330.relaxed.HmA[1].logn,pCO2_5330.relaxed.HmA[2].logn,pCO2_5330.relaxed.HmA[3].logn,pCO2_5330.relaxed.HmA[4].logn,pCO2_5330.relaxed.HmNH3[1].logn,pCO2_5330.relaxed.HmNH3[2].logn,pCO2_5330.relaxed.HmNH3[3].logn,pCO2_5330.relaxed.HmNH3[4].logn,pCO2_5330.relaxed.HmNH2[1].logn,pCO2_5330.relaxed.HmNH2[2].logn,pCO2_5330.relaxed.HmNH2[3].logn,pCO2_5330.relaxed.HmNH2[4].logn,pCO2_5330.relaxed.HmNHCOO[1].logn,pCO2_5330.relaxed.HmNHCOO[2].logn,pCO2_5330.relaxed.HmNHCOO[3].logn,pCO2_5330.relaxed.HmNHCOO[4].logn,pCO2_5330.tensed.OxyHm[1].logn,pCO2_5330.tensed.OxyHm[2].logn,pCO2_5330.tensed.OxyHm[3].logn,pCO2_5330.tensed.OxyHm[4].logn,pCO2_5330.tensed.DeoxyHm[1].logn,pCO2_5330.tensed.DeoxyHm[2].logn,pCO2_5330.tensed.DeoxyHm[3].logn,pCO2_5330.tensed.DeoxyHm[4].logn,pCO2_5330.tensed.HmAH[1].logn,pCO2_5330.tensed.HmAH[2].logn,pCO2_5330.tensed.HmAH[3].logn,pCO2_5330.tensed.HmAH[4].logn,pCO2_5330.tensed.HmA[1].logn,pCO2_5330.tensed.HmA[2].logn,pCO2_5330.tensed.HmA[3].logn,pCO2_5330.tensed.HmA[4].logn,pCO2_5330.tensed.HmNH3[1].logn,pCO2_5330.tensed.HmNH3[2].logn,pCO2_5330.tensed.HmNH3[3].logn,pCO2_5330.tensed.HmNH3[4].logn,pCO2_5330.tensed.HmNH2[1].logn,pCO2_5330.tensed.HmNH2[2].logn,pCO2_5330.tensed.HmNH2[3].logn,pCO2_5330.tensed.HmNH2[4].logn,pCO2_5330.tensed.HmNHCOO[1].logn,pCO2_5330.tensed.HmNHCOO[2].logn,pCO2_5330.tensed.HmNHCOO[3].logn,pCO2_5330.tensed.HmNHCOO[4].logn,pCO2_5330.CO2_free.logn,pCO2_9330.solution.temperature,pCO2_9330.O2_free.logn,pCO2_9330.H2O.logn,pCO2_9330.relaxed.OxyHm[1].logn,pCO2_9330.relaxed.OxyHm[2].logn,pCO2_9330.relaxed.OxyHm[3].logn,pCO2_9330.relaxed.OxyHm[4].logn,pCO2_9330.relaxed.DeoxyHm[1].logn,pCO2_9330.relaxed.DeoxyHm[2].logn,pCO2_9330.relaxed.DeoxyHm[3].logn,pCO2_9330.relaxed.DeoxyHm[4].logn,pCO2_9330.relaxed.HmAH[1].logn,pCO2_9330.relaxed.HmAH[2].logn,pCO2_9330.relaxed.HmAH[3].logn,pCO2_9330.relaxed.HmAH[4].logn,pCO2_9330.relaxed.HmA[1].logn,pCO2_9330.relaxed.HmA[2].logn,pCO2_9330.relaxed.HmA[3].logn,pCO2_9330.relaxed.HmA[4].logn,pCO2_9330.relaxed.HmNH3[1].logn,pCO2_9330.relaxed.HmNH3[2].logn,pCO2_9330.relaxed.HmNH3[3].logn,pCO2_9330.relaxed.HmNH3[4].logn,pCO2_9330.relaxed.HmNH2[1].logn,pCO2_9330.relaxed.HmNH2[2].logn,pCO2_9330.relaxed.HmNH2[3].logn,pCO2_9330.relaxed.HmNH2[4].logn,pCO2_9330.relaxed.HmNHCOO[1].logn,pCO2_9330.relaxed.HmNHCOO[2].logn,pCO2_9330.relaxed.HmNHCOO[3].logn,pCO2_9330.relaxed.HmNHCOO[4].logn,pCO2_9330.tensed.OxyHm[1].logn,pCO2_9330.tensed.OxyHm[2].logn,pCO2_9330.tensed.OxyHm[3].logn,pCO2_9330.tensed.OxyHm[4].logn,pCO2_9330.tensed.DeoxyHm[1].logn,pCO2_9330.tensed.DeoxyHm[2].logn,pCO2_9330.tensed.DeoxyHm[3].logn,pCO2_9330.tensed.DeoxyHm[4].logn,pCO2_9330.tensed.HmAH[1].logn,pCO2_9330.tensed.HmAH[2].logn,pCO2_9330.tensed.HmAH[3].logn,pCO2_9330.tensed.HmAH[4].logn,pCO2_9330.tensed.HmA[1].logn,pCO2_9330.tensed.HmA[2].logn,pCO2_9330.tensed.HmA[3].logn,pCO2_9330.tensed.HmA[4].logn,pCO2_9330.tensed.HmNH3[1].logn,pCO2_9330.tensed.HmNH3[2].logn,pCO2_9330.tensed.HmNH3[3].logn,pCO2_9330.tensed.HmNH3[4].logn,pCO2_9330.tensed.HmNH2[1].logn,pCO2_9330.tensed.HmNH2[2].logn,pCO2_9330.tensed.HmNH2[3].logn,pCO2_9330.tensed.HmNH2[4].logn,pCO2_9330.tensed.HmNHCOO[1].logn,pCO2_9330.tensed.HmNHCOO[2].logn,pCO2_9330.tensed.HmNHCOO[3].logn,pCO2_9330.tensed.HmNHCOO[4].logn,pCO2_9330.CO2_free.logn) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (3702): * Single equations (assignments): 3693 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 9 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 6 systems {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)} * Non-linear torn systems (#iteration vars, #inner vars): 3 systems {(1,3), (1,3), (1,3)} Notification: Performance of Backend phase and start with SimCode phase: time 0.8689/19.88, allocations: 211.9 MB / 5.488 GB, free: 39.22 MB / 0.9514 GB Notification: Performance of simCode: created initialization part: time 0.5363/20.42, allocations: 85.3 MB / 5.572 GB, free: 316.3 MB / 0.9514 GB Notification: Performance of simCode: created event and clocks part: time 1.495e-05/20.42, allocations: 0 / 5.572 GB, free: 316.3 MB / 0.9514 GB Notification: Performance of simCode: created simulation system equations: time 0.1295/20.55, allocations: 54.54 MB / 5.625 GB, free: 300.6 MB / 0.9514 GB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.05812/20.6, allocations: 7.824 MB / 5.632 GB, free: 297.6 MB / 0.9514 GB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 4.052/24.66, allocations: 0.8502 GB / 6.483 GB, free: 252.5 MB / 0.9514 GB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.05682/24.71, allocations: 30.57 MB / 6.512 GB, free: 250.2 MB / 0.9514 GB Notification: Performance of simCode: alias equations: time 0.05824/24.77, allocations: 15.62 MB / 6.528 GB, free: 249 MB / 0.9514 GB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.05697/24.83, allocations: 22.84 MB / 6.55 GB, free: 245.5 MB / 0.9514 GB Notification: Performance of SimCode: time 1.142e-06/24.83, allocations: 0 / 6.55 GB, free: 245.5 MB / 0.9514 GB Notification: Performance of buildModelFMU: Generate the FMI files: time 2.75/27.58, allocations: 1.436 GB / 7.986 GB, free: 42.95 MB / 0.9514 GB Notification: Performance of buildModelFMU: Generate platform static: time 381.4/408.9, allocations: 2.969 kB / 7.986 GB, free: 42.95 MB / 0.9514 GB " [Timeout remaining time 250] (rm -f Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; mkfifo Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; head -c 1048576 < Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe >> ../files/Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.sim & /home/hudson/saved_omc/OMSimulator/install/bin/OMSimulator --tempDir=temp_Chemical_master_Chemical_Obsolete_Examples_Hemoglobin_Joels57_fmu --startTime=0 --stopTime=70 --stepSize=0.028 --timeout=50 --tolerance=1e-05 Chemical_master_Chemical_Obsolete_Examples_Hemoglobin_Joels57.fmu > Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe 2>&1) [Timeout 52.5] [Calling os._exit(0), Time elapsed: 418.8071325409983] Failed to read output from testmodel.py, exit status != 0: 409.6677287670027 409.8843255 406.434664081 Calling exit ...